Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039323_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:1839047:1842858:-1 gene:Zm00001d039323 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-pyruvate monooxygenase YUCCA2
Sequence	ATGCGGCCGGCCGAGATCATGGACCGCCGCCGCTTTGCCGAGACGGAGGGCAAGAGGGCG CACGACCCGCTGTACAGCCCGCGGCGCGCGGCGAGGGCGACGGCCACCGGCTTCCCCGTC GGTGAGCACGGGGAGGTGCTGGCGGGGCCAGTGATCGTGGGCGCGGGGCCGGCAGGCCTT GCGGTGGCGGCGTGCCTCACCATGCGGGGCGTCCCGTACGTGCTGTTGGAGCGCCATGGC TGCGTCGCCTCGCTGTGGCGCCACCGCACGTACCGCAGGCTGCGCCTCCACCTGCCCAAA CGCTTCTGCGAACTGCCGCTCATGCCGTTCCCGCCAAGCTACCCGGCCTACCCAACCCGG GAGCAGTTCCTCGCCTACCTCGAGGACTACATCGCCACCTTCGGCATCAGGCCATTCTTC CGCCAGGCCGTCGTCAGCGCCGAGCACGACGGCGACTTCTGGTGCGTCCGCACCCTCGAC GGCGGCGGCACCAGCCGGGAGTACCGCTCCAAATGGCTAGTCGTGGCCACAGGCGAGAAC GCGGAGCCCGTCGTGCCTGACATCGACGGCATCCATGCCTTCAGGGGCCTCGTCATACAC TCCAGTGACTACCGCAGCGGCGAGAGCTACCGGGGTAAGAAAGTGCTCGTGATCGGCTGC GGCAATTCCGGTATGGAGGTGTCTCTCGACCTCTCCAACCACAATGTACACACGTCCATG GTGGTGCGTGACTCGGTGCATGTTCTTCCAAGAGAGATCATGGGTGTCTCCACTTTTGGT TTGTCCCTATGGCTTCTCACGCATCTATCAATTCAGAAAGTGGACCAAATACTCCTGGTG CTCACACAGCTTGTGCTAGGAGACACCGCACGCCTCGGCATTCCTCGACCTAACATTGGT CCGATGGAGTTAAAGAGAGTCTCTGGAAAGACACCAGTTCTGGATGTGGGAACTATAGCC AAGATCAAATCTGGAGACATTAAAGTGTATCCAGCAATTCAAAGTTTTCAAGAGCATGGG GTTCAGTTTATTGATGGCAAGTCTGAATCATTTGATGTTGTGATTCTTGCCACTGGATAT AAAAGTAATGTTCCTTATTGGTTGAAGGATAAGGATTTGTTTTCAGAGAAAAATGGATTT CCACATAATTCAAATGAATGGAAAGGAAAAAATGGTCTTTATGCTGCTGGATTTTCAAGA CGTGGGCTACTTGGTGTGTCTATGGATGCTACAAATATTGCAGATGACATCCTTGGATGT TGGAATGACTTTGGCTATGAAAGACACAAGAGAAAATAA

Peptide Sequence

PEP ID	Zm00001d039323_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:1839047:1842858:-1 gene:Zm00001d039323 transcript:Zm00001d039323_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-pyruvate monooxygenase YUCCA2
Sequence	MRPAEIMDRRRFAETEGKRAHDPLYSPRRAARATATGFPVGEHGEVLAGPVIVGAGPAGL AVAACLTMRGVPYVLLERHGCVASLWRHRTYRRLRLHLPKRFCELPLMPFPPSYPAYPTR EQFLAYLEDYIATFGIRPFFRQAVVSAEHDGDFWCVRTLDGGGTSREYRSKWLVVATGEN AEPVVPDIDGIHAFRGLVIHSSDYRSGESYRGKKVLVIGCGNSGMEVSLDLSNHNVHTSM VVRDSVHVLPREIMGVSTFGLSLWLLTHLSIQKVDQILLVLTQLVLGDTARLGIPRPNIG PMELKRVSGKTPVLDVGTIAKIKSGDIKVYPAIQSFQEHGVQFIDGKSESFDVVILATGY KSNVPYWLKDKDLFSEKNGFPHNSNEWKGKNGLYAAGFSRRGLLGVSMDATNIADDILGC WNDFGYERHKRK

Transcript Sequence

Transcript ID	Zm00001d039323_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:1839047:1842858:-1 gene:Zm00001d039323 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-pyruvate monooxygenase YUCCA2
Sequence	CTATGTTCTCCTCGACGAACCACTAGTAGTAGTGGTGGTGCCCGTGTGACCGTGTCCGTG CTCCATCGCAAGAGAGGAGATGAGATCATGAGAGCGAGATTTAGTGGTTGCACATTTGAT CTATCTATATATATATATATGAACCGTCTAGCCCACATCCTCCTCCTCCTGTAGTCTACC TCCACACCTGTTACGACGGTACGACCTCTTGCTCTCTACCTGCAGTGTCTATCTGATCAT TGATGAGCCAACAGCCCAATATCCCTGAGCTAATTCAGCTGTGCCATCCATCGAGCTTCT GCTGTGCTGCTGGTCACGAGCGCACATATATATTATAGACTACTACTCTTCTGTCGACGG CGTGCCCTATGCGGCCGGCCGAGATCATGGACCGCCGCCGCTTTGCCGAGACGGAGGGCA AGAGGGCGCACGACCCGCTGTACAGCCCGCGGCGCGCGGCGAGGGCGACGGCCACCGGCT TCCCCGTCGGTGAGCACGGGGAGGTGCTGGCGGGGCCAGTGATCGTGGGCGCGGGGCCGG CAGGCCTTGCGGTGGCGGCGTGCCTCACCATGCGGGGCGTCCCGTACGTGCTGTTGGAGC GCCATGGCTGCGTCGCCTCGCTGTGGCGCCACCGCACGTACCGCAGGCTGCGCCTCCACC TGCCCAAACGCTTCTGCGAACTGCCGCTCATGCCGTTCCCGCCAAGCTACCCGGCCTACC CAACCCGGGAGCAGTTCCTCGCCTACCTCGAGGACTACATCGCCACCTTCGGCATCAGGC CATTCTTCCGCCAGGCCGTCGTCAGCGCCGAGCACGACGGCGACTTCTGGTGCGTCCGCA CCCTCGACGGCGGCGGCACCAGCCGGGAGTACCGCTCCAAATGGCTAGTCGTGGCCACAG GCGAGAACGCGGAGCCCGTCGTGCCTGACATCGACGGCATCCATGCCTTCAGGGGCCTCG TCATACACTCCAGTGACTACCGCAGCGGCGAGAGCTACCGGGGTAAGAAAGTGCTCGTGA TCGGCTGCGGCAATTCCGGTATGGAGGTGTCTCTCGACCTCTCCAACCACAATGTACACA CGTCCATGGTGGTGCGTGACTCGGTGCATGTTCTTCCAAGAGAGATCATGGGTGTCTCCA CTTTTGGTTTGTCCCTATGGCTTCTCACGCATCTATCAATTCAGAAAGTGGACCAAATAC TCCTGGTGCTCACACAGCTTGTGCTAGGAGACACCGCACGCCTCGGCATTCCTCGACCTA ACATTGGTCCGATGGAGTTAAAGAGAGTCTCTGGAAAGACACCAGTTCTGGATGTGGGAA CTATAGCCAAGATCAAATCTGGAGACATTAAAGTGTATCCAGCAATTCAAAGTTTTCAAG AGCATGGGGTTCAGTTTATTGATGGCAAGTCTGAATCATTTGATGTTGTGATTCTTGCCA CTGGATATAAAAGTAATGTTCCTTATTGGTTGAAGGATAAGGATTTGTTTTCAGAGAAAA ATGGATTTCCACATAATTCAAATGAATGGAAAGGAAAAAATGGTCTTTATGCTGCTGGAT TTTCAAGACGTGGGCTACTTGGTGTGTCTATGGATGCTACAAATATTGCAGATGACATCC TTGGATGTTGGAATGACTTTGGCTATGAAAGACACAAGAGAAAATAATATGTTATTTGTG TGATTGATAAGGATACCATCTCCAATTTTTACTCAAATATTTTGTGGATACGTGTACTTG TCTATTTACATCTATTCGAACATGTGGATGCAATAGGAAAAATATTGTGCTAACTTCTCC ACCACCACAATCATACCTACCACCACAATCATATAGTTGCATTAGACAAGTACATGTAAA AGTTATAGGTTTATCTTTTGTATTTTAGTTTTGCTCTAACATTAGATCTTCTAATTTGAG AGACAATCGTTGGATTCTTTTTCTTTGTGAGGTTGAAGAGATTCTTTTATTTTGACAAAC AACGCAAGTTGTTTTTGTAAGTGTTGATTGTACTAGATGAATGGGTAAATTTCTTGTTTT TCTTATAGTGTGGTAATATTAGTTGCAATATATTTTTACCTTGGTGATGGG