Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039319_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:3:1692052:1698191:-1 gene:Zm00001d039319 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP binding;GTP binding
Sequence

ATGCCGTGCTCCTCTTCGTCGTCCAACCCCTTCCACTCCCTCGCCTCCGCCTTCCCCTTC
CTCTCCTCCACATCCCCACCCCCATCCCCACCCGCCTCGCCCGCGCCCGCCGCTCCCCAC
CTCGCCGTCCCGCTCCTCCTCCCCGTCTCCTCGGCTTCCGAGTCCCGCCGCGGGGCGCAG
CCGCTGCCGGGCACGCGGATGGTCGGCGCGGGCGCGACCGGCGGGGGTAACATGGCCAGC
GGTGGTGGGGGGCCCGCGTTCGTGGGCCAGGTGTTCACCATGCTCGACCCATCCGGGAAC
GGGCTCATGGCCGTTACCACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAGGACTCCT
ATGTGGTTCAAAAGGATGCTATCACCGTCGAAGAAGACTGAAAATAGTCCAGTATTTAGG
TTTTTTATGGATCTGAATGATGCAGTATCCTATGTAAAGCGACTAAATGTGCCAAGCGGC
ATGGTGGGGGCTTGTCGCCTTGATGTAGCATATGAACATTTCAAGGAAAAGCCTCACATG
TTCCAGTTTGTTCCAAATGAAAAGCAGGTCCAGGCTGCCAATAAGCTATTGAAGTCACTT
CCACAAAGGGGCAGAAGGAAAAAACTTGATGGGGTTCCTGTTTTTAGTGCGCAAAACTTG
AATATTGCAGTGGCAACAAATGATGGAATTAGATGGTACACACCATACTTTTTTGATAAA
AACTTGTTGGACAATATCCTTGAAGCTTCTATGGATCAACATTTCCATTCGATAATGCAA
AATCGCCATACACGTCGTAGAAGGGATATTGTCGATGATAGTTTAACATCAGAAATAATT
GAAGAAAGTGCTGAAAGCTTGCTTGAGCCCCCAGAGGTTCAAGAATTAATGAATGAGATT
GGCCCAGCTGGTATACCATTAAATGTTGTAACGAAAGCTGCAGAGATTCAGTTTCTTGAT
GTTGTTGATAAAGTCCTTCTAGGAAATAAGTGGTTAAGGAAAGCTTCTGGCATACAACCA
AAGTTCCCTTATGTTGTTGATTCATTTGAAGAAAGGACTGCTGTTTCAATTGCCAATATT
GCTACTACCAGCAGTTTAACTGCTTCAAACGACGACAGCAGTTGCCAGAATAATCAAGAA
ACTCAATCTTCCGAGCCAAGTGGTGATAACAGCAGCTACAGAAATCACAATAATGAAGAT
CATAATCACTTTCCGTTTAGCAATCTGCTTCCAAATATATGGCCAGGGCATGACAGAAAG
TTCAAATCACAAGAGAGTGACAATAAGTTTAGCAGATATGATGCCGACGTGAAGAGTAAG
TTACAAGCAAACCCTCTTCTTCCGAAAATCACCATGGTTGGCATCTCAATGGGTGATGGT
GCACAGATGAGCAAAGCCAACTTAAAGAAGACAATGGAAGACTTGACAAAAGAGTTGGAG
CAAACGAGTGAAGAAAATATGTTCGGTGATGAAAAAGACCCACTTTTTGTTGCCAACGTT
GGTGACTACTCAAGGATAACAAAGATTAGCTCTGCATGA

Peptide Sequence

PEP ID

Zm00001d039319_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:3:1692052:1698191:-1 gene:Zm00001d039319 transcript:Zm00001d039319_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP binding;GTP binding
Sequence

MPCSSSSSNPFHSLASAFPFLSSTSPPPSPPASPAPAAPHLAVPLLLPVSSASESRRGAQ
PLPGTRMVGAGATGGGNMASGGGGPAFVGQVFTMLDPSGNGLMAVTTRFELPRFLTNRTP
MWFKRMLSPSKKTENSPVFRFFMDLNDAVSYVKRLNVPSGMVGACRLDVAYEHFKEKPHM
FQFVPNEKQVQAANKLLKSLPQRGRRKKLDGVPVFSAQNLNIAVATNDGIRWYTPYFFDK
NLLDNILEASMDQHFHSIMQNRHTRRRRDIVDDSLTSEIIEESAESLLEPPEVQELMNEI
GPAGIPLNVVTKAAEIQFLDVVDKVLLGNKWLRKASGIQPKFPYVVDSFEERTAVSIANI
ATTSSLTASNDDSSCQNNQETQSSEPSGDNSSYRNHNNEDHNHFPFSNLLPNIWPGHDRK
FKSQESDNKFSRYDADVKSKLQANPLLPKITMVGISMGDGAQMSKANLKKTMEDLTKELE
QTSEENMFGDEKDPLFVANVGDYSRITKISSA

Transcript Sequence

Transcript ID

Zm00001d039319_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:1692052:1698191:-1 gene:Zm00001d039319 gene_biotype:protein_coding transcript_biotype:protein_coding description:GTP binding;GTP binding
Sequence

AAGCAGGCGCCACCCGTTCGGTCCGTACAGGAGGGGTCCACCATGCCGTGCTCCTCTTCG
TCGTCCAACCCCTTCCACTCCCTCGCCTCCGCCTTCCCCTTCCTCTCCTCCACATCCCCA
CCCCCATCCCCACCCGCCTCGCCCGCGCCCGCCGCTCCCCACCTCGCCGTCCCGCTCCTC
CTCCCCGTCTCCTCGGCTTCCGAGTCCCGCCGCGGGGCGCAGCCGCTGCCGGGCACGCGG
ATGGTCGGCGCGGGCGCGACCGGCGGGGGTAACATGGCCAGCGGTGGTGGGGGGCCCGCG
TTCGTGGGCCAGGTGTTCACCATGCTCGACCCATCCGGGAACGGGCTCATGGCCGTTACC
ACACGCTTCGAGCTCCCGCGCTTCCTCACCAACAGGACTCCTATGTGGTTCAAAAGGATG
CTATCACCGTCGAAGAAGACTGAAAATAGTCCAGTATTTAGGTTTTTTATGGATCTGAAT
GATGCAGTATCCTATGTAAAGCGACTAAATGTGCCAAGCGGCATGGTGGGGGCTTGTCGC
CTTGATGTAGCATATGAACATTTCAAGGAAAAGCCTCACATGTTCCAGTTTGTTCCAAAT
GAAAAGCAGGTCCAGGCTGCCAATAAGCTATTGAAGTCACTTCCACAAAGGGGCAGAAGG
AAAAAACTTGATGGGGTTCCTGTTTTTAGTGCGCAAAACTTGAATATTGCAGTGGCAACA
AATGATGGAATTAGATGGTACACACCATACTTTTTTGATAAAAACTTGTTGGACAATATC
CTTGAAGCTTCTATGGATCAACATTTCCATTCGATAATGCAAAATCGCCATACACGTCGT
AGAAGGGATATTGTCGATGATAGTTTAACATCAGAAATAATTGAAGAAAGTGCTGAAAGC
TTGCTTGAGCCCCCAGAGGTTCAAGAATTAATGAATGAGATTGGCCCAGCTGGTATACCA
TTAAATGTTGTAACGAAAGCTGCAGAGATTCAGTTTCTTGATGTTGTTGATAAAGTCCTT
CTAGGAAATAAGTGGTTAAGGAAAGCTTCTGGCATACAACCAAAGTTCCCTTATGTTGTT
GATTCATTTGAAGAAAGGACTGCTGTTTCAATTGCCAATATTGCTACTACCAGCAGTTTA
ACTGCTTCAAACGACGACAGCAGTTGCCAGAATAATCAAGAAACTCAATCTTCCGAGCCA
AGTGGTGATAACAGCAGCTACAGAAATCACAATAATGAAGATCATAATCACTTTCCGTTT
AGCAATCTGCTTCCAAATATATGGCCAGGGCATGACAGAAAGTTCAAATCACAAGAGAGT
GACAATAAGTTTAGCAGATATGATGCCGACGTGAAGAGTAAGTTACAAGCAAACCCTCTT
CTTCCGAAAATCACCATGGTTGGCATCTCAATGGGTGATGGTGCACAGATGAGCAAAGCC
AACTTAAAGAAGACAATGGAAGACTTGACAAAAGAGTTGGAGCAAACGAGTGAAGAAAAT
ATGTTCGGTGATGAAAAAGACCCACTTTTTGTTGCCAACGTTGGTGACTACTCAAGGATA
ACAAAGATTAGCTCTGCATGAGGCTCGTTGACCAACAGGCGACAGCAAGGGTGTTGTACT
GAACTGCTAACGAAGTCTACAGTCCATGATACTGATCTTAGAGGGCTCTACTGATATAAT
GATGCAAATCGGAGGTCATCAGATCATATGGACATTCGACTGTCGACCGTTCTGACTTTA
GAGGCTATCCAACGTCAACAGTTACAAGCCAATCTAAATTTTCGGATATGATTTGCCAAA
AGGATGATTGTAAATAGAAAAGTTTGCAGAATGTCCACCATGCAGTTAGGCGTGAAGATC
TGAAGCAACATGTTGTTGGATTTCTAAGATCTTAGCTCGTAACAGCTGTAGAGTATGGTG
GTATATAGCTTCAGGATTGAGATGGGGGTCACAGGAGTCTGTCAGGTGAGCAGAGTCGAA
TAAATTGATGTGGGTAGCATTTTTCTTCACTAGCTGCGTATCGGATCTGAGTGTGTATGG
CGAGAGTTACGGTAAATGTTGGTTCGCATATAGGTCCTTGGATTATTTATTGTACGCGAT
ATGGTGAAAGGAGGTTGTAGCTAACATGTTGTGTCTCCGATCATCATACTGACATTATTG