Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039305_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:3:1404873:1407903:1 gene:Zm00001d039305 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I-associated factor PAF67
Sequence

ATGATCACGCAGATCCTCGAGAAGGAGAAGGAGGGCCTGGAGCAGTTCACTGCCACCGAT
GGCTACGACTACGAGGGTGGCAGCAACGTGCTCAAGGTGCTGGGCTACTACAGCATGATT
GGCCTCCTAAGGATACACTGTCTCCTCGGGGATTACCACACCGGCCTCAAGTGCCTCACG
CCCATCGACCTCAACCAGCAAGGGGTCTACACCATTGTCATTGGGAGCCACATCTCAGCC
ATCTACCACTACGGCTTCGCAAACCTTATGATGCGCAGGTATGTTGAGGCCACTCGTGAA
TTCAACAAGATTCTTCTGTATATCCTCAAGTACAAGCAGTACCACCAGAATTCCCCTCAG
TATGATCAGATACTGAAGAAAAATGAGCAGATGTATGCATTGTTGGCAATTTGCCTATCT
TTGTGCCCACAGAACAAGCTCATTGATGAAAATGTTAGCACCCAGCTGAAAGAAAAGTAT
AATGACAAGATGACAAAGATGCAGAGGTATGATGATGAAGCATACGCTGCTTATGATGAG
CTATTCTCGTATGCTTGCCCCAAGTTCATTACACCGTCGCCTCCAATTCTGGACCAGCCG
CTAACAAACTATAACCAGGATGCATACCGTCTTCAGTTGAAGTTGTTTCTCTATGAAGTA
AAGCAGCAACAGTTGCTTTCTGGGATTCGGAGTTATCTGAAGCTATATTCAACAATAACC
ATTAGCAAACTTGCCCAATATATGGAAGTGGATGAAGCAACACTAAGGTCGATCCTGATG
ACATACAAGCACAAAATGCATGCAGTTGACAGTGAAGGAAAGATAGTATCAAGTGCAGAC
TTTGACTTCTACATCGTCGAGGATGTGATTCATGTTGTGGAGTCCAAACCTACCAAGCGT
CATGGTGATTACTTTTTGAGACAAATTTTGAAG

Peptide Sequence

PEP ID

Zm00001d039305_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:3:1404873:1407903:1 gene:Zm00001d039305 transcript:Zm00001d039305_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I-associated factor PAF67
Sequence

MITQILEKEKEGLEQFTATDGYDYEGGSNVLKVLGYYSMIGLLRIHCLLGDYHTGLKCLT
PIDLNQQGVYTIVIGSHISAIYHYGFANLMMRRYVEATREFNKILLYILKYKQYHQNSPQ
YDQILKKNEQMYALLAICLSLCPQNKLIDENVSTQLKEKYNDKMTKMQRYDDEAYAAYDE
LFSYACPKFITPSPPILDQPLTNYNQDAYRLQLKLFLYEVKQQQLLSGIRSYLKLYSTIT
ISKLAQYMEVDEATLRSILMTYKHKMHAVDSEGKIVSSADFDFYIVEDVIHVVESKPTKR
HGDYFLRQILK

Transcript Sequence

Transcript ID

Zm00001d039305_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:1404873:1407903:1 gene:Zm00001d039305 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA polymerase I-associated factor PAF67
Sequence

TGACTACTATCCCCCCAAATCAAACGTACCTGCAGGCGTGGAACGTGTACGGGGTCCTCA
ACTACCTGCAAGCGTTGGTTGAGAAGTCCATGATCACGCAGATCCTCGAGAAGGAGAAGG
AGGGCCTGGAGCAGTTCACTGCCACCGATGGCTACGACTACGAGGGTGGCAGCAACGTGC
TCAAGGTGCTGGGCTACTACAGCATGATTGGCCTCCTAAGGATACACTGTCTCCTCGGGG
ATTACCACACCGGCCTCAAGTGCCTCACGCCCATCGACCTCAACCAGCAAGGGGTCTACA
CCATTGTCATTGGGAGCCACATCTCAGCCATCTACCACTACGGCTTCGCAAACCTTATGA
TGCGCAGGTATGTTGAGGCCACTCGTGAATTCAACAAGATTCTTCTGTATATCCTCAAGT
ACAAGCAGTACCACCAGAATTCCCCTCAGTATGATCAGATACTGAAGAAAAATGAGCAGA
TGTATGCATTGTTGGCAATTTGCCTATCTTTGTGCCCACAGAACAAGCTCATTGATGAAA
ATGTTAGCACCCAGCTGAAAGAAAAGTATAATGACAAGATGACAAAGATGCAGAGGTATG
ATGATGAAGCATACGCTGCTTATGATGAGCTATTCTCGTATGCTTGCCCCAAGTTCATTA
CACCGTCGCCTCCAATTCTGGACCAGCCGCTAACAAACTATAACCAGGATGCATACCGTC
TTCAGTTGAAGTTGTTTCTCTATGAAGTAAAGCAGCAACAGTTGCTTTCTGGGATTCGGA
GTTATCTGAAGCTATATTCAACAATAACCATTAGCAAACTTGCCCAATATATGGAAGTGG
ATGAAGCAACACTAAGGTCGATCCTGATGACATACAAGCACAAAATGCATGCAGTTGACA
GTGAAGGAAAGATAGTATCAAGTGCAGACTTTGACTTCTACATCGTCGAGGATGTGATTC
ATGTTGTGGAGTCCAAACCTACCAAGCGTCATGGTGATTACTTTTTGAGACAAATTTTGA
AGGT