Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039294_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:3:1171174:1176018:-1 gene:Zm00001d039294 gene_biotype:protein_coding transcript_biotype:protein_coding description:Activating signal cointegrator 1 complex subunit 1
Sequence

ATGGAAGGGGCGCAAGGATCAAGCATTGTGACAAAACACAATAAAAGGCAGTCTCCTGTG
CAGAGATGGAGGCCAGTTTCAACAGAAGCAGTTCCCCAGCATCACCAAGATGACATTATT
GAGACATCAAATTCTGGAAGCAAGAAAATTATAGAGGATTGCATAGCTTCTAGTGAGAAT
TTGCCACCAGATGGAACAACCAATGTTGTTGAAGTTACCGCCAATGATGCTTCATCGTCA
AAAAATAATTTAAGTTTTGGGTACAGTTCAACTAAAGTAGTTATAGAAGACCATGCGGAG
TTATCTGGCTTCAATAAGGATCTAGCTGGGTCCAATGTCTTCGGGACACATTCCTCCTCT
GTTGAGGCGGTTCAAAGTCGACAGCTTGACTACTCTCATTTCATATCACTTCCATTGGCT
TTACACCCAGATCTTGTCAACAAACTGAACTACTTCCAGAGTTCGATCCTTGGGGAAGAA
AACAGTAACAAAGATGGGAGCCAAAGTGAAGGTTCTATTGGTGAAATGGACTATGACCAC
AAGCAAGCGGAAGCAAAAATGGGTGCCAAAGGCTCCCAATCAGATTTTGGCATTGACAAG
TCAATATTTATCAAACCCGAAACGTTTCACCTGACGGTTCTTATGTTGAAGTTGTGGAAC
AAGGAACGTATAGATAAGGCCTCGGATGTGCTCCAGTCAGTATCTACCCAAGTAAATGAA
GCTTTGGAAAATCGACCTATTTCCATACAGCTTAGGGGTCTGACATGCATGAAAGGCTTT
CCAGCTAAGGCTCGGGTGGTATATGTTCCAGTGCTGGAAGTTGGTAGCGAAGGGCGCCTA
GCTCATGCTTGCAAAGTCATAACTGACGCGTTTATCAAGGCAGGCCTAGTTTTTGAAAGG
GACGTGAGAGAACTGAAGTTGCACGCGACCGTAATGAACGTGCGGCACAGGAAGAGCAGC
AGAAATAAACGGAACACATGGACGGATTCGTTTGATGCCCGGGGCATATTCGGGAGATTT
GGGAAGGCGGAGTGGGGTGCATATCCCATCCATGAGATCCACCTTTCTCAGAGGTTCAAG
TTTGACAGAAGTGGGTACTACTATTGCTGCTCGTCGATCCCCTTGCCTGCGGAGATGCAC
ACGGAGTGA

Peptide Sequence

PEP ID

Zm00001d039294_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:3:1171174:1176018:-1 gene:Zm00001d039294 transcript:Zm00001d039294_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Activating signal cointegrator 1 complex subunit 1
Sequence

MEGAQGSSIVTKHNKRQSPVQRWRPVSTEAVPQHHQDDIIETSNSGSKKIIEDCIASSEN
LPPDGTTNVVEVTANDASSSKNNLSFGYSSTKVVIEDHAELSGFNKDLAGSNVFGTHSSS
VEAVQSRQLDYSHFISLPLALHPDLVNKLNYFQSSILGEENSNKDGSQSEGSIGEMDYDH
KQAEAKMGAKGSQSDFGIDKSIFIKPETFHLTVLMLKLWNKERIDKASDVLQSVSTQVNE
ALENRPISIQLRGLTCMKGFPAKARVVYVPVLEVGSEGRLAHACKVITDAFIKAGLVFER
DVRELKLHATVMNVRHRKSSRNKRNTWTDSFDARGIFGRFGKAEWGAYPIHEIHLSQRFK
FDRSGYYYCCSSIPLPAEMHTE

Transcript Sequence

Transcript ID

Zm00001d039294_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:1171174:1176018:-1 gene:Zm00001d039294 gene_biotype:protein_coding transcript_biotype:protein_coding description:Activating signal cointegrator 1 complex subunit 1
Sequence

GGCGCATCCTCGTACTAGCGAATCCTCTCTTCGTCCAGTTATTCTCCTCACAAAGGCCGA
AGCTTAAATCACCTCCGGTTAGGATCTCATCAGTCTAATTCCTCCTTGTCCTTGTTCGTT
TCTGGTAGGGCTAGTCGGCTCACTCGGCCTGCGATTCCAAGCGCCGCCGGTTCGCCGCTT
CGTTACCTCCACCAGGGATCATATTGTCGAAATAAGTTGGCCTCATTCGTGATGGAAGGG
GCGCAAGGATCAAGCATTGTGACAAAACACAATAAAAGGCAGTCTCCTGTGCAGAGATGG
AGGCCAGTTTCAACAGAAGCAGTTCCCCAGCATCACCAAGATGACATTATTGAGACATCA
AATTCTGGAAGCAAGAAAATTATAGAGGATTGCATAGCTTCTAGTGAGAATTTGCCACCA
GATGGAACAACCAATGTTGTTGAAGTTACCGCCAATGATGCTTCATCGTCAAAAAATAAT
TTAAGTTTTGGGTACAGTTCAACTAAAGTAGTTATAGAAGACCATGCGGAGTTATCTGGC
TTCAATAAGGATCTAGCTGGGTCCAATGTCTTCGGGACACATTCCTCCTCTGTTGAGGCG
GTTCAAAGTCGACAGCTTGACTACTCTCATTTCATATCACTTCCATTGGCTTTACACCCA
GATCTTGTCAACAAACTGAACTACTTCCAGAGTTCGATCCTTGGGGAAGAAAACAGTAAC
AAAGATGGGAGCCAAAGTGAAGGTTCTATTGGTGAAATGGACTATGACCACAAGCAAGCG
GAAGCAAAAATGGGTGCCAAAGGCTCCCAATCAGATTTTGGCATTGACAAGTCAATATTT
ATCAAACCCGAAACGTTTCACCTGACGGTTCTTATGTTGAAGTTGTGGAACAAGGAACGT
ATAGATAAGGCCTCGGATGTGCTCCAGTCAGTATCTACCCAAGTAAATGAAGCTTTGGAA
AATCGACCTATTTCCATACAGCTTAGGGGTCTGACATGCATGAAAGGCTTTCCAGCTAAG
GCTCGGGTGGTATATGTTCCAGTGCTGGAAGTTGGTAGCGAAGGGCGCCTAGCTCATGCT
TGCAAAGTCATAACTGACGCGTTTATCAAGGCAGGCCTAGTTTTTGAAAGGGACGTGAGA
GAACTGAAGTTGCACGCGACCGTAATGAACGTGCGGCACAGGAAGAGCAGCAGAAATAAA
CGGAACACATGGACGGATTCGTTTGATGCCCGGGGCATATTCGGGAGATTTGGGAAGGCG
GAGTGGGGTGCATATCCCATCCATGAGATCCACCTTTCTCAGAGGTTCAAGTTTGACAGA
AGTGGGTACTACTATTGCTGCTCGTCGATCCCCTTGCCTGCGGAGATGCACACGGAGTGA
GGTGTGTAGCTGTGATCATGTTGTAGGTTTTTAAGGGGCGTTTATAGCATATACATATAT
ATATTTTACCGCAGTTCATGAGGCGTTTAACCTTGTTATTAGCGTTGGCCCTTAGGGGCC
AGGTGTTACCATGTATCTATCTATCGGTTTGAATCACCGATGGGCAGGTGTTACCGTGCA
TCTAGTGTTTTGAATCTGAATCGCCGATTTGAGCCGTTGT