Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039287_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:3:1055458:1064285:-1 gene:Zm00001d039287 gene_biotype:protein_coding transcript_biotype:protein_coding description:VHS domain-containing protein
Sequence	ATGGATCAGAGCCGGCGGGCGGTGGAGTCGTACTGGCGATCGCGGATGGTGGACGGTGTC ACGGCCGACGACGACAAGGTCGCGCCCGTCTACAAGCTCGAGGAGATCTGCGAGCTCCTG CGCGCCTCCGACGCCAGCATCGTCAAGGAGGTCGCCGATTTCGTCCTCAAGCGCCTTGAC AACAAGAGCCCCCTCGTCAAGCAGAAGGCTTTAAGGTTGATCAAATACGCAGTTGGAAAA TCTGGTACTGATTTCAAGAGGGAGATGCAAAGGCACTCAGCGGCTATGCGCCAACTAGTT CATTACAAAGGCCACCCTGATCCCTTAAGAGGGGATGCCCTTAATAAGGCTGTTCGCGAA ACTGCGAATGAGGCTATAGCTGCAATTTTCTCCACAGAGGACCCTAAACCTGCTGTTGCA ACCGAAAGTCTTGGCAAGCGCATACAGGGCTTTGGAAATACTAATTACGAGCCATCTAGA GATGACAAGAAGTCTTTCCTTAGCGAGCTTAGCGAGGTAGTGGGTATTGGAAGTGCATCC ATTAAGCAGGGGTTGAGCAACTTTGCTGCAGCGCATGCAATGATGACAAATGACAATGGT AGCACATACAGGAGCCCTAATCTCCGTAGATCTTTGACCACGGAATCTGAAAGATATGGT CGGTATGATCCAAGTGAAATTCAACGTGAGAGCCGAGCCTCATCTGATGCTTCAAAGAAT GCACCTTCTGGTCCTTGGGGTCCAACTTCCAGTTCTACACCAACTGATGAAACTAGCTCA AGTCAACCAGGGATTAAGACTCGTGAAGAAAGACTTCTAGAGACAATTGTTACTGCAAGT GGTGTGCGATTGCAACCAACGCGAGATGCTCTGCAAATTTTTTTCGCAGAAGCTTCCAAA TTGGATGCAGTTGCCTTGAGCCGTGCACTTGAGAGCAAACTGAATTCTCCATTATGGCAG GTTCGCATGAAGGCTATTTGTGTGTTAGAAGCCATTGTAAGGAAACAGGATACTGATCCT TACTCTATCATCGCTTCATATTTCACTGAGAACACAGCTTCTGTTGTTAAATGCTCTGAG CTGCCACAGGTTTCTCTCAGAGAGAAAGCCTCAAAGGTCTTGAATATGCTGATTGGGGAA CAACCTACCGGAACCGCAGCAACAAAAGCTGCGATGCCCACACCTGTTCAGATGCCTGAT TTGATCGATACAGGTGATCAAGATGATCTGGCAACAAGTTCTGGACATGCAAGCATTGAA CAGAATTCTGGGAACAGTGCATATGTTTCTTCAGTTGATGATTTGCTTGGTGGTGAACCT ATTTCTGATACAAGTGTCACTGCTGATAGTAATGGAAGCGACCCATTTGCAGATGTATCA TTCCATGAGGCAGAGACTAAGGAGACTAATGATCTGTTCTCAGGGTTGACAGTAGAAGAG AAATCATCAACTACCATGCATGATAGTTCTTCGGACAAAAATGAATTACCAGATATCTTT GGCAGCTCCCCTGATTCTTTCAACCAGGGTAGTGTTACTGACCAAGGAACTGTCAATGAT TTGATTGCTGGCTTGAACCTTAATGGAACAGGCCATGCTCAGTCTGCAGTTAAAGCAGAA CCCAATAGCAACAGTGGTTCACAGTTCTTTGATACAAAAAATGAGTCCGGCCATGTGCCA AGTGCTGCAACATTGAATGACATTCTTGGTCAAAACTCGCTTTACCAACAGCAGCAGACT CCATTGCAGTACAGCTTTCCTCAACATATGATGCTCAATCAATCATTTCCTGGACAACAA TTAAATTATGGTGCCATGGGGATTCTTCTTGCTCAGCAGCAGCAGTTACTGCAAAGTTTT GGAAATTTCAATGCTGGACTTGGGAATTCTTCTTTCAATTCGATGAACGTGATGAGCAGT TCGAAGAAAGATGACAATAAAGCTTTTGATTTTGTTTCGGATCACCTTGCAGCAGCACGT GGTTCAAGAAAGTGA

Peptide Sequence

PEP ID	Zm00001d039287_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:3:1055458:1064285:-1 gene:Zm00001d039287 transcript:Zm00001d039287_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:VHS domain-containing protein
Sequence	MDQSRRAVESYWRSRMVDGVTADDDKVAPVYKLEEICELLRASDASIVKEVADFVLKRLD NKSPLVKQKALRLIKYAVGKSGTDFKREMQRHSAAMRQLVHYKGHPDPLRGDALNKAVRE TANEAIAAIFSTEDPKPAVATESLGKRIQGFGNTNYEPSRDDKKSFLSELSEVVGIGSAS IKQGLSNFAAAHAMMTNDNGSTYRSPNLRRSLTTESERYGRYDPSEIQRESRASSDASKN APSGPWGPTSSSTPTDETSSSQPGIKTREERLLETIVTASGVRLQPTRDALQIFFAEASK LDAVALSRALESKLNSPLWQVRMKAICVLEAIVRKQDTDPYSIIASYFTENTASVVKCSE LPQVSLREKASKVLNMLIGEQPTGTAATKAAMPTPVQMPDLIDTGDQDDLATSSGHASIE QNSGNSAYVSSVDDLLGGEPISDTSVTADSNGSDPFADVSFHEAETKETNDLFSGLTVEE KSSTTMHDSSSDKNELPDIFGSSPDSFNQGSVTDQGTVNDLIAGLNLNGTGHAQSAVKAE PNSNSGSQFFDTKNESGHVPSAATLNDILGQNSLYQQQQTPLQYSFPQHMMLNQSFPGQQ LNYGAMGILLAQQQQLLQSFGNFNAGLGNSSFNSMNVMSSSKKDDNKAFDFVSDHLAAAR GSRK

Transcript Sequence

Transcript ID	Zm00001d039287_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:1055458:1064285:-1 gene:Zm00001d039287 gene_biotype:protein_coding transcript_biotype:protein_coding description:VHS domain-containing protein
Sequence	AGACCCGCGCGGCCATCCTCCTCTAGAACCTTCCACGGCCCCACCTCCTCCTTCGTTCCT CCGCTCACCCCAACCCTCCTCGGCTCCTCCCTCCACGCCTCTCCTCGTCGACGAGCGGAC CCGGTCTACGCCCCCGACCCCCACCCCCGTCCCTGCCCCCGTCCCCGCCCCCTCCCGATC CCAGATCCCGCCCTCCCATCGGGGCATCAGCCATGGATCAGAGCCGGCGGGCGGTGGAGT CGTACTGGCGATCGCGGATGGTGGACGGTGTCACGGCCGACGACGACAAGGTCGCGCCCG TCTACAAGCTCGAGGAGATCTGCGAGCTCCTGCGCGCCTCCGACGCCAGCATCGTCAAGG AGGTCGCCGATTTCGTCCTCAAGCGCCTTGACAACAAGAGCCCCCTCGTCAAGCAGAAGG CTTTAAGGTTGATCAAATACGCAGTTGGAAAATCTGGTACTGATTTCAAGAGGGAGATGC AAAGGCACTCAGCGGCTATGCGCCAACTAGTTCATTACAAAGGCCACCCTGATCCCTTAA GAGGGGATGCCCTTAATAAGGCTGTTCGCGAAACTGCGAATGAGGCTATAGCTGCAATTT TCTCCACAGAGGACCCTAAACCTGCTGTTGCAACCGAAAGTCTTGGCAAGCGCATACAGG GCTTTGGAAATACTAATTACGAGCCATCTAGAGATGACAAGAAGTCTTTCCTTAGCGAGC TTAGCGAGGTAGTGGGTATTGGAAGTGCATCCATTAAGCAGGGGTTGAGCAACTTTGCTG CAGCGCATGCAATGATGACAAATGACAATGGTAGCACATACAGGAGCCCTAATCTCCGTA GATCTTTGACCACGGAATCTGAAAGATATGGTCGGTATGATCCAAGTGAAATTCAACGTG AGAGCCGAGCCTCATCTGATGCTTCAAAGAATGCACCTTCTGGTCCTTGGGGTCCAACTT CCAGTTCTACACCAACTGATGAAACTAGCTCAAGTCAACCAGGGATTAAGACTCGTGAAG AAAGACTTCTAGAGACAATTGTTACTGCAAGTGGTGTGCGATTGCAACCAACGCGAGATG CTCTGCAAATTTTTTTCGCAGAAGCTTCCAAATTGGATGCAGTTGCCTTGAGCCGTGCAC TTGAGAGCAAACTGAATTCTCCATTATGGCAGGTTCGCATGAAGGCTATTTGTGTGTTAG AAGCCATTGTAAGGAAACAGGATACTGATCCTTACTCTATCATCGCTTCATATTTCACTG AGAACACAGCTTCTGTTGTTAAATGCTCTGAGCTGCCACAGGTTTCTCTCAGAGAGAAAG CCTCAAAGGTCTTGAATATGCTGATTGGGGAACAACCTACCGGAACCGCAGCAACAAAAG CTGCGATGCCCACACCTGTTCAGATGCCTGATTTGATCGATACAGGTGATCAAGATGATC TGGCAACAAGTTCTGGACATGCAAGCATTGAACAGAATTCTGGGAACAGTGCATATGTTT CTTCAGTTGATGATTTGCTTGGTGGTGAACCTATTTCTGATACAAGTGTCACTGCTGATA GTAATGGAAGCGACCCATTTGCAGATGTATCATTCCATGAGGCAGAGACTAAGGAGACTA ATGATCTGTTCTCAGGGTTGACAGTAGAAGAGAAATCATCAACTACCATGCATGATAGTT CTTCGGACAAAAATGAATTACCAGATATCTTTGGCAGCTCCCCTGATTCTTTCAACCAGG GTAGTGTTACTGACCAAGGAACTGTCAATGATTTGATTGCTGGCTTGAACCTTAATGGAA CAGGCCATGCTCAGTCTGCAGTTAAAGCAGAACCCAATAGCAACAGTGGTTCACAGTTCT TTGATACAAAAAATGAGTCCGGCCATGTGCCAAGTGCTGCAACATTGAATGACATTCTTG GTCAAAACTCGCTTTACCAACAGCAGCAGACTCCATTGCAGTACAGCTTTCCTCAACATA TGATGCTCAATCAATCATTTCCTGGACAACAATTAAATTATGGTGCCATGGGGATTCTTC TTGCTCAGCAGCAGCAGTTACTGCAAAGTTTTGGAAATTTCAATGCTGGACTTGGGAATT CTTCTTTCAATTCGATGAACGTGATGAGCAGTTCGAAGAAAGATGACAATAAAGCTTTTG ATTTTGTTTCGGATCACCTTGCAGCAGCACGTGGTTCAAGAAAGTGAAACAGGAAGCAAT GAACATGTCCAGATGCTGGAAAGAGCTCAAGTATTTGATGGACACAATAGCTGGGAATTC CAAAAACTGCATCTCGTCACAGCCTCGCAGATTGGATGCGTGATTCACACGGCTGGTTTG GCATTGTTTGAACACATGAGAAGGAAGGGTTGTTCCATACGGTTGGAAGACGAGATGTTG CGTTGTGTACTATGTATTTAGACGAAGACTGTTCTTTTTTACGCTGAAAAATAAATTGCA TCTTCCGTCTTTCTTTGTGTTGTGCTCCTTTTCTCTATCCTTTTTCTTTTCTAGAAAAAA AAAGAGTGAGACACTATACGTGTTTGTTACCTGCAGGTTTTATGTTTCTTTTCTGTACAA GTATATGGAGGATTTTTTTGGTGGCAATTGTAAAGCTTTGGAACGTGAATAAGAGGGTGC AGTAT