Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039278_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:961157:964772:1 gene:Zm00001d039278 gene_biotype:protein_coding transcript_biotype:protein_coding description:25.3 kDa vesicle transport protein
Sequence

ATGGTTAAGCTGACTATGATAGCGCGTGTCACTGATGGCCTTCCATTGTCGGAGGGATTA
GATGATAGTCGGGATCTCAAAGATGCTGACTTCTACAAGCAGCAAGCAAAACTGTTGTTC
AAGAACTTGTCCAGAGGGCAGCATGAGGCGTCAAGGATGTCAATTGAGACAGGACCGTAC
CTTTTCCAGTATCCTAAGACCTTTTTCTCATTTGCAAAATTCTTTGTTCCACAATTAATC
ATTTCGAAATATTATCTCGAAGATCTCAAAAATGAATTTGAGAAAGTCAATGGCAGCCAA
ATTGAAACTGCTGCAAGGCCATATGCATTTATTAAATTTGATGCATTCATACAGAAGACC
AAGAAACTGTATTTGGATACCAGAACACAGAGGAACCTTGCTAAGCTGAACGATGAGCTC
TATGAGGTGCACCAGATCATGACTCGCAATGTTCAAGAAGTTCTCGGTGTTGGTGAAAAA
CTAGACCAGGTGAGTGAGATGTCAAGTAGGTTGACTTCGGATACTAGAATCTATGCAGAG
AAGGCGAAAGATCTCAATCGCCAGGCATTGATTCGTAAATATGCCCCCGTTGCTATTGTG
ATTGGGATAGTAGTGATGCTCTTCTGGGTGAAGAACAAGATATGGTGA

Peptide Sequence

PEP ID

Zm00001d039278_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:961157:964772:1 gene:Zm00001d039278 transcript:Zm00001d039278_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:25.3 kDa vesicle transport protein
Sequence

MVKLTMIARVTDGLPLSEGLDDSRDLKDADFYKQQAKLLFKNLSRGQHEASRMSIETGPY
LFQYPKTFFSFAKFFVPQLIISKYYLEDLKNEFEKVNGSQIETAARPYAFIKFDAFIQKT
KKLYLDTRTQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSDTRIYAE
KAKDLNRQALIRKYAPVAIVIGIVVMLFWVKNKIW

Transcript Sequence

Transcript ID

Zm00001d039278_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:961157:964772:1 gene:Zm00001d039278 gene_biotype:protein_coding transcript_biotype:protein_coding description:25.3 kDa vesicle transport protein
Sequence

ATGGTTAAGCTGACTATGATAGCGCGTGTCACTGATGGCCTTCCATTGTCGGAGGGATTA
GATGATAGTCGGGATCTCAAAGATGCTGACTTCTACAAGCAGCAAGCAAAACTGTTGTTC
AAGAACTTGTCCAGAGGGCAGCATGAGGCGTCAAGGATGTCAATTGAGACAGGACCGTAC
CTTTTCCAGTATCCTAAGACCTTTTTCTCATTTGCAAAATTCTTTGTTCCACAATTAATC
ATTTCGAAATATTATCTCGAAGATCTCAAAAATGAATTTGAGAAAGTCAATGGCAGCCAA
ATTGAAACTGCTGCAAGGCCATATGCATTTATTAAATTTGATGCATTCATACAGAAGACC
AAGAAACTGTATTTGGATACCAGAACACAGAGGAACCTTGCTAAGCTGAACGATGAGCTC
TATGAGGTGCACCAGATCATGACTCGCAATGTTCAAGAAGTTCTCGGTGTTGGTGAAAAA
CTAGACCAGGTGAGTGAGATGTCAAGTAGGTTGACTTCGGATACTAGAATCTATGCAGAG
AAGGCGAAAGATCTCAATCGCCAGGCATTGATTCGTAAATATGCCCCCGTTGCTATTGTG
ATTGGGATAGTAGTGATGCTCTTCTGGGTGAAGAACAAGATATGGTGACTGGTGCCATCT
TGCGTTCACAGTTATCATGCTGGAACCAGCTGAGTTGTCTTGTCTTCCCTCGTGCAACCA
TATGTTTGATCGTGGTTCCAAAAAGAAAAGAAAGATGGCTCGATGGTTTATCCCGCATCT
GCCGATTCAAGCGACTACTTTAGCTATCAAAAGCAAAACCACGGTAGTAGAGATAGCCTT
GGAACTGCACATTTCTATTAACTGGACATGTATAATAGTTCTCGTGAGCGCACACCATGT
AATCGTCGAAATTCATCCATGTGTTGTGACATTTTTTGAGCACAGTTGAACATGTGGTGG
AGCCTGGAGGCAGGTCATTCTCAGCCCAATCTGACGTAATAGGTGAGAGGGCTATTGCAT
AACAGGTGGACCTAGCTAGGAGAAACACAACATGACCCCATTATGGGTCTTGTTCAATCA
TCATCATCGAAGAGACAAAGGTCCTGTTTGGGGTTC