Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039273_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:900767:901685:-1 gene:Zm00001d039273 gene_biotype:protein_coding transcript_biotype:protein_coding description:SOUL heme-binding family protein
Sequence

ATGGCGAAGCAGCAGAATCCTATCCCCATCCCGATGCCGCTGTCGCTGTCGCTGCCCCTC
GTCCTCGTCGCGCTGCTCCTGCCGGCCGCCCGCGGCGCCGCGGAGACGCCGCAGTACACG
ACGGTGCACGCGGAGTCGGACTTCGAGGTGCGGCTGTACGGCGACACCGTCTGGATGTCC
GCCCCCACCCCGGACATCCCTTCCTTCCACGTCGCCACCAAGCTCGGCTTCCACAGATTG
TTCCAGTACCTGATGGGCGCAAACCTCAACTCTTCGAGGATCAGGATGACCACCCCTGTG
CTCACGAGTGTGGTTCCAGGTGCAGGGCCTCTGCGCTCCTCGGCCTACTCCGTCCGGCTG
TACCTGCCGGCGAAGTTCCAGGCTTCCCCTCCGGTTCCTCTCCCAGAGCTGAACCTGCAT
CCAGATCGGTGGCCAGGCCACTGCGTCGCAGCGAGGAGCTTCTCGGGTCGTGCACGGGAC
AAGAACGTGGTCGAGGAAGCCGAGAAGCTCGCCATGAGCCTGAGCCGGTCACCATGGGCT
AACTCCACAGACTACTCCAGCAAGAGCGCTTACTCGGTTGCACAGTACAGCAGTCCATTC
CGCATCATTGGCCGTGTCAATGAGGTGTGGTTCGACGTCAACTGCAGATCTACATCTACT
GCTGCTGGTGTTGAGTCCTACTGA

Peptide Sequence

PEP ID

Zm00001d039273_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:900767:901685:-1 gene:Zm00001d039273 transcript:Zm00001d039273_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:SOUL heme-binding family protein
Sequence

MAKQQNPIPIPMPLSLSLPLVLVALLLPAARGAAETPQYTTVHAESDFEVRLYGDTVWMS
APTPDIPSFHVATKLGFHRLFQYLMGANLNSSRIRMTTPVLTSVVPGAGPLRSSAYSVRL
YLPAKFQASPPVPLPELNLHPDRWPGHCVAARSFSGRARDKNVVEEAEKLAMSLSRSPWA
NSTDYSSKSAYSVAQYSSPFRIIGRVNEVWFDVNCRSTSTAAGVESY

Transcript Sequence

Transcript ID

Zm00001d039273_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:900767:901685:-1 gene:Zm00001d039273 gene_biotype:protein_coding transcript_biotype:protein_coding description:SOUL heme-binding family protein
Sequence

CACACACACACTGCCTGTTTATTTTGTGGACCTATAGCATATTCCCGTGGTCTCCCCCCT
TTTGCTTTGCTTGCCGAGACGGCGACCATGGCGAAGCAGCAGAATCCTATCCCCATCCCG
ATGCCGCTGTCGCTGTCGCTGCCCCTCGTCCTCGTCGCGCTGCTCCTGCCGGCCGCCCGC
GGCGCCGCGGAGACGCCGCAGTACACGACGGTGCACGCGGAGTCGGACTTCGAGGTGCGG
CTGTACGGCGACACCGTCTGGATGTCCGCCCCCACCCCGGACATCCCTTCCTTCCACGTC
GCCACCAAGCTCGGCTTCCACAGATTGTTCCAGTACCTGATGGGCGCAAACCTCAACTCT
TCGAGGATCAGGATGACCACCCCTGTGCTCACGAGTGTGGTTCCAGGTGCAGGGCCTCTG
CGCTCCTCGGCCTACTCCGTCCGGCTGTACCTGCCGGCGAAGTTCCAGGCTTCCCCTCCG
GTTCCTCTCCCAGAGCTGAACCTGCATCCAGATCGGTGGCCAGGCCACTGCGTCGCAGCG
AGGAGCTTCTCGGGTCGTGCACGGGACAAGAACGTGGTCGAGGAAGCCGAGAAGCTCGCC
ATGAGCCTGAGCCGGTCACCATGGGCTAACTCCACAGACTACTCCAGCAAGAGCGCTTAC
TCGGTTGCACAGTACAGCAGTCCATTCCGCATCATTGGCCGTGTCAATGAGGTGTGGTTC
GACGTCAACTGCAGATCTACATCTACTGCTGCTGGTGTTGAGTCCTACTGAAAAAAAAAC
CTGCCAGATGTGATGGATAATAATAATTTGCATGTAAAACACAAGCTGTCCTGCTTTAT