Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039271_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:888050:889900:1 gene:Zm00001d039271 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH3
Sequence

ATGGTCATGAAGATGGAGCTTGAGGACGATGGTGCCTTGGGAGGAACTGCTGGCACGTGG
ACAGAGGAGGACCGAGGTCTCGGCGCTGCCGTGCTTGGAGCCGATGCCTTTGCATATCTA
ACGAAAGGAGGTGGTGCCATATCCGAGGGCCTTGTCTCCGCGTCTTTGCCGGATGACTTG
CAGAACAAACTCCAGGAGCTTGTCGAATCCGAGAGCCCTGGTACCGGTTGGAACTATGCC
ATCTTCTGGCAGCTCTCGCGCACAAAGTCTGGTGATCTCGTCCTTGGATGGGGGGACGGC
TGCTGCCGTGAGCCCCGAGTTGGGGAGGTGGGAGCTGCTGCTTCTGCAGGCAGCGATGAT
ACCAAGCAGAGGATGCGCAAGCGTGTGCTGCAGCGGTTGCACATAGCATTCGGGGTTGCT
GACGAGGAAGATTATGCCCATGGTATTGATCAGGTCACTGACACTGAGATGTTCTTCCTA
GCATCTATGTACTTTGCTTTTCCCCGTTGTGCTGGTGGCCCTGGCCAAGCATTTGCAGCA
GGGATCCCCCTCTGGGTTCCCAATAGTGAGCGCAAGGTATTTCCGGCCAACTACTGTTAC
CGGGGGTTCCTCGCAAATGCGGCAGGATTTAGGACTATTGTTTTGGTGCCATTTGAGAGT
GGTGTCCTTGAACTGGGGTCAATGCAGCACATAGCTGAGAGTTCTGATACTATCCAGACC
ATACGGTCTGTATTTGCAGGGACAAGAGGTAATAAGGCTGCAGTACAGAGACACGAGGGA
AATGGTCCTGCTCCCCCTGAAAGGTCACCCAGTTTGGCGAAGATCTTTGGGAAGGATTTG
AACCTTGGCCGGCCTTCAGTTGGTGTACCTAAGGTAGATGAAAGGATATGGGAACAGAGG
AGTGCTGGTGGTGGTACCTCATTGCTGCCGAGTGTCCAGAAAGGATTGCAGAATTTCACT
TGGAGTCAGGCTCGTGGCCTGAATTCACATCAGCAGAAGTTTGGCAATGGAGTGTTGATT
GTGAGCAATGAGGCTGGACACCGCAACAACGGAGCAGTGGACAGCCCTAGCACAGCCCAG
TTTCAGCTTCAAAAGGTGCCTCAGCTTCAGAAACTGCAACTCCAGAAATTGCCGGTTGTT
CAGAAGACACCGCAGCTAGGGAACCAGCAGCCTATGCAGACACAGGTACCTAGGCAAATT
GACTTTAGCGCTGGGAGCAGTTCCAAGCCTGGTGTGTTGGTTACAAGGGCAGCTGTCCTG
GATGGAGAGAGTGCAGAGGTGGATGGCTTGTGCAAAGAGGAAGGGGCGCCGCCTGTTATA
GAGGACCGACGACCAAGGAAGAGGGGAAGAAAACCTGCCAACGGGAGGGAAGAACCACTT
AATCATGTCGAGGCTGAGCGGCAGAGGAGGGAGAAGCTCAACCAGCGGTTCTATGCGCTT
AGAGCTGTTGTGCCGAACATATCGAAAATGGACAAGGCGTCCCTGCTGGGCGATGCGATA
ACGTACATCACTGACCTCCAGAAGAAGCTGAAGGAGATGGAGACAGAGAGGGAAAGGCTC
CTGGAGTCTGGTATGGTGGACCCAAGGGAGCGTGCGCCTAGGCCGGAGGTGGACATACAG
GTGGTGCAGGACGAGGTCCTTGTACGAGTGATGTCTCCAATGGAGAACCATCCAGTCAAG
AAGGTCTTCCAAGCGTTCGAAGAGGCAGAAGTCCGCCTGGGCGAGTCAAAGGTGACGGGC
AACAACAACAACGGGACAGTGGTGCATTCTTTCATCATCAAGTGTCCCGGCACTGAGCAG
CAAACGAGGGAGAAGGTGATAGCGGCGATGTCTCGTGCGATGAGCAGTTGA

Peptide Sequence

PEP ID

Zm00001d039271_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:888050:889900:1 gene:Zm00001d039271 transcript:Zm00001d039271_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH3
Sequence

MVMKMELEDDGALGGTAGTWTEEDRGLGAAVLGADAFAYLTKGGGAISEGLVSASLPDDL
QNKLQELVESESPGTGWNYAIFWQLSRTKSGDLVLGWGDGCCREPRVGEVGAAASAGSDD
TKQRMRKRVLQRLHIAFGVADEEDYAHGIDQVTDTEMFFLASMYFAFPRCAGGPGQAFAA
GIPLWVPNSERKVFPANYCYRGFLANAAGFRTIVLVPFESGVLELGSMQHIAESSDTIQT
IRSVFAGTRGNKAAVQRHEGNGPAPPERSPSLAKIFGKDLNLGRPSVGVPKVDERIWEQR
SAGGGTSLLPSVQKGLQNFTWSQARGLNSHQQKFGNGVLIVSNEAGHRNNGAVDSPSTAQ
FQLQKVPQLQKLQLQKLPVVQKTPQLGNQQPMQTQVPRQIDFSAGSSSKPGVLVTRAAVL
DGESAEVDGLCKEEGAPPVIEDRRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL
RAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLLESGMVDPRERAPRPEVDIQ
VVQDEVLVRVMSPMENHPVKKVFQAFEEAEVRLGESKVTGNNNNGTVVHSFIIKCPGTEQ
QTREKVIAAMSRAMSS

Transcript Sequence

Transcript ID

Zm00001d039271_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:888050:889900:1 gene:Zm00001d039271 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH3
Sequence

ATGGTCATGAAGATGGAGCTTGAGGACGATGGTGCCTTGGGAGGAACTGCTGGCACGTGG
ACAGAGGAGGACCGAGGTCTCGGCGCTGCCGTGCTTGGAGCCGATGCCTTTGCATATCTA
ACGAAAGGAGGTGGTGCCATATCCGAGGGCCTTGTCTCCGCGTCTTTGCCGGATGACTTG
CAGAACAAACTCCAGGAGCTTGTCGAATCCGAGAGCCCTGGTACCGGTTGGAACTATGCC
ATCTTCTGGCAGCTCTCGCGCACAAAGTCTGGTGATCTCGTCCTTGGATGGGGGGACGGC
TGCTGCCGTGAGCCCCGAGTTGGGGAGGTGGGAGCTGCTGCTTCTGCAGGCAGCGATGAT
ACCAAGCAGAGGATGCGCAAGCGTGTGCTGCAGCGGTTGCACATAGCATTCGGGGTTGCT
GACGAGGAAGATTATGCCCATGGTATTGATCAGGTCACTGACACTGAGATGTTCTTCCTA
GCATCTATGTACTTTGCTTTTCCCCGTTGTGCTGGTGGCCCTGGCCAAGCATTTGCAGCA
GGGATCCCCCTCTGGGTTCCCAATAGTGAGCGCAAGGTATTTCCGGCCAACTACTGTTAC
CGGGGGTTCCTCGCAAATGCGGCAGGATTTAGGACTATTGTTTTGGTGCCATTTGAGAGT
GGTGTCCTTGAACTGGGGTCAATGCAGCACATAGCTGAGAGTTCTGATACTATCCAGACC
ATACGGTCTGTATTTGCAGGGACAAGAGGTAATAAGGCTGCAGTACAGAGACACGAGGGA
AATGGTCCTGCTCCCCCTGAAAGGTCACCCAGTTTGGCGAAGATCTTTGGGAAGGATTTG
AACCTTGGCCGGCCTTCAGTTGGTGTACCTAAGGTAGATGAAAGGATATGGGAACAGAGG
AGTGCTGGTGGTGGTACCTCATTGCTGCCGAGTGTCCAGAAAGGATTGCAGAATTTCACT
TGGAGTCAGGCTCGTGGCCTGAATTCACATCAGCAGAAGTTTGGCAATGGAGTGTTGATT
GTGAGCAATGAGGCTGGACACCGCAACAACGGAGCAGTGGACAGCCCTAGCACAGCCCAG
TTTCAGCTTCAAAAGGTGCCTCAGCTTCAGAAACTGCAACTCCAGAAATTGCCGGTTGTT
CAGAAGACACCGCAGCTAGGGAACCAGCAGCCTATGCAGACACAGGTACCTAGGCAAATT
GACTTTAGCGCTGGGAGCAGTTCCAAGCCTGGTGTGTTGGTTACAAGGGCAGCTGTCCTG
GATGGAGAGAGTGCAGAGGTGGATGGCTTGTGCAAAGAGGAAGGGGCGCCGCCTGTTATA
GAGGACCGACGACCAAGGAAGAGGGGAAGAAAACCTGCCAACGGGAGGGAAGAACCACTT
AATCATGTCGAGGCTGAGCGGCAGAGGAGGGAGAAGCTCAACCAGCGGTTCTATGCGCTT
AGAGCTGTTGTGCCGAACATATCGAAAATGGACAAGGCGTCCCTGCTGGGCGATGCGATA
ACGTACATCACTGACCTCCAGAAGAAGCTGAAGGAGATGGAGACAGAGAGGGAAAGGCTC
CTGGAGTCTGGTATGGTGGACCCAAGGGAGCGTGCGCCTAGGCCGGAGGTGGACATACAG
GTGGTGCAGGACGAGGTCCTTGTACGAGTGATGTCTCCAATGGAGAACCATCCAGTCAAG
AAGGTCTTCCAAGCGTTCGAAGAGGCAGAAGTCCGCCTGGGCGAGTCAAAGGTGACGGGC
AACAACAACAACGGGACAGTGGTGCATTCTTTCATCATCAAGTGTCCCGGCACTGAGCAG
CAAACGAGGGAGAAGGTGATAGCGGCGATGTCTCGTGCGATGAGCAGTTGA