Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039264_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:767126:768688:-1 gene:Zm00001d039264 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-amino-acid transaminase chloroplastic
Sequence

ATGGGCGGCGGCGGCGGCATCGCGGCCTCCTCCCTACCCGGCCATGTACTCGAGCGTGTT
CGGCGGCATCATCCTGGACCCGGCCATGATGGTTCTCCCCATCGACGACCACATGGTCCA
CCGGGGCCACGGCGTGTTCGACACGGCCATGATCCTGGACGGCGCCCTGTACGAGCTGGA
CGCGCACCTGGACCGCTTCCTCCGGTCGGCCGCGGCGGCGCGCGTGGGCACGGCCCCGTT
CCCGCGCGAGGCGACTTCCTGCTGTCCTCCAGGGGCTGCCCGTCGCCGGCGTTCTACGGC
GTGGTGATCGCGTCGGAGTACGAGCAGTGCGGGGTGGACGGCACCGGGGTGCGCGCGGTC
ACGGCCACGGTGCCCATGAAGCCGCCGCAGTTCGCGACCGTGAAGAACGTGAACTACCTT
CCCAACGTGCTGTCCATCATGGACGCCGAGGACCGCGGCGCCTTCGCGTCCGTGTGGGTG
GACGACCAAGGGTACGTGGCCGAGGGCCCCATGGTGAACGTGGCGTTCGTGACGCCCGAG
CGGGAGCTCGTGCTCCCGGCCTTCGACAAGATCCTCAGCGGGTGCACGGCCAAGAGGATG
CTCGCGCTGGCGCCTCGCCTCGTGGACGCCGGCCTGCTCGCGGGCGTCAGCACCAGGGAC
ATCACAGCCGAGGACGCCAAGCGCAGCGCCGAGATGGCGTTCGTCGGCAGCGGCCTCCCC
GTGCTGCCCGTCGTCGAGTGGGACGGCAAACCCATCGGAGACGGGAAGGTTGGGAAGCTG
ATGCCGGCGCTGTCTGATCTGCTGTGGGAGGACATGAAGTCCGGTCCCGACAGGATCCCC
GTTCCATACAAGCAGTAG

Peptide Sequence

PEP ID

Zm00001d039264_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:767126:768688:-1 gene:Zm00001d039264 transcript:Zm00001d039264_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-amino-acid transaminase chloroplastic
Sequence

MGGGGGIAASSLPGHVLERVRRHHPGPGHDGSPHRRPHGPPGPRRVRHGHDPGRRPVRAG
RAPGPLPPVGRGGARGHGPVPARGDFLLSSRGCPSPAFYGVVIASEYEQCGVDGTGVRAV
TATVPMKPPQFATVKNVNYLPNVLSIMDAEDRGAFASVWVDDQGYVAEGPMVNVAFVTPE
RELVLPAFDKILSGCTAKRMLALAPRLVDAGLLAGVSTRDITAEDAKRSAEMAFVGSGLP
VLPVVEWDGKPIGDGKVGKLMPALSDLLWEDMKSGPDRIPVPYKQ

Transcript Sequence

Transcript ID

Zm00001d039264_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:767126:768688:-1 gene:Zm00001d039264 gene_biotype:protein_coding transcript_biotype:protein_coding description:D-amino-acid transaminase chloroplastic
Sequence

ATTGCCCATCACATTCCATCGACCAGTCTCAATTCAAGGAGCTGAGGACGACCTGTCCGT
CCGGAGCTGATCGAGAAACGGAGGGGCGGTTCCAGTTTCAGTCCAGCTAGCTAGCTAGCT
AGAAGATCCCATTCGCTGACAGATGGGTTCCTACATCCAAGGAGATGATGAGGTCCCTGT
GTACGAGTCGGGCGCCGAGGTGCTTGCGAAGGTGCAAGAGAAATGGGCGGCGGCGGCGGC
ATCGCGGCCTCCTCCCTACCCGGCCATGTACTCGAGCGTGTTCGGCGGCATCATCCTGGA
CCCGGCCATGATGGTTCTCCCCATCGACGACCACATGGTCCACCGGGGCCACGGCGTGTT
CGACACGGCCATGATCCTGGACGGCGCCCTGTACGAGCTGGACGCGCACCTGGACCGCTT
CCTCCGGTCGGCCGCGGCGGCGCGCGTGGGCACGGCCCCGTTCCCGCGCGAGGCGACTTC
CTGCTGTCCTCCAGGGGCTGCCCGTCGCCGGCGTTCTACGGCGTGGTGATCGCGTCGGAG
TACGAGCAGTGCGGGGTGGACGGCACCGGGGTGCGCGCGGTCACGGCCACGGTGCCCATG
AAGCCGCCGCAGTTCGCGACCGTGAAGAACGTGAACTACCTTCCCAACGTGCTGTCCATC
ATGGACGCCGAGGACCGCGGCGCCTTCGCGTCCGTGTGGGTGGACGACCAAGGGTACGTG
GCCGAGGGCCCCATGGTGAACGTGGCGTTCGTGACGCCCGAGCGGGAGCTCGTGCTCCCG
GCCTTCGACAAGATCCTCAGCGGGTGCACGGCCAAGAGGATGCTCGCGCTGGCGCCTCGC
CTCGTGGACGCCGGCCTGCTCGCGGGCGTCAGCACCAGGGACATCACAGCCGAGGACGCC
AAGCGCAGCGCCGAGATGGCGTTCGTCGGCAGCGGCCTCCCCGTGCTGCCCGTCGTCGAG
TGGGACGGCAAACCCATCGGAGACGGGAAGGTTGGGAAGCTGATGCCGGCGCTGTCTGAT
CTGCTGTGGGAGGACATGAAGTCCGGTCCCGACAGGATCCCCGTTCCATACAAGCAGTAG
CCTGAGCGAAGGCGAAGCCATGACATGTCTCTCTCTCTCTCTCTGTGTATGTGTTTGCAG
TCGAATGGTGATTGCCTTGCCTGAATAAAAATAAACCTCTCTCTG