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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039253_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:567922:571079:-1 gene:Zm00001d039253 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 protein (OPA3)
Sequence

ATGGCGCTGCCGGTGGCGAAGCTGGGGACCCTAGCGCTGCGGACGCTGTCCAAGCCCATC
GCCAGCCGCCTCAAGAGCCAGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGCC
ATCGCCCAGGCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGCC
ACAGATGTGGCGATCAGGCCTTTGGATGAGCAGAAAGCTGTTCAAGCTGCTACAGATCTC
ATCGGGGAAGCCTTTATCTTCTCGGTCGCTGTTGCTGCTCTAATTTTTGAGGTTCAGAGA
AACGCAAGGTCTGAGGCTAGGAAGGAGGAAGCTCGTAGACAGGAACTTGAGGAATTGAAA
CGAAGGGAAGAGAGTATAGCTAAAGAATTGGAAGATCTTAAATTGAAGCTTAGTGAAATT
GAGCAGCTTGCTAAAGGGCGAGGCCTGACAGGAATCTTGAACTTGAAACGGGTCCATGGC
ACAGAGGTCGGCAAGGCAGCAGCACCTCTGCGTGAGTAA

Peptide Sequence

PEP ID

Zm00001d039253_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:567922:571079:-1 gene:Zm00001d039253 transcript:Zm00001d039253_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 protein (OPA3)
Sequence

MALPVAKLGTLALRTLSKPIASRLKSQAAVHPKFRNFIIAIAQANHQITTKIQRRIYGHA
TDVAIRPLDEQKAVQAATDLIGEAFIFSVAVAALIFEVQRNARSEARKEEARRQELEELK
RREESIAKELEDLKLKLSEIEQLAKGRGLTGILNLKRVHGTEVGKAAAPLRE

Transcript Sequence

Transcript ID

Zm00001d039253_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:567922:571079:-1 gene:Zm00001d039253 gene_biotype:protein_coding transcript_biotype:protein_coding description:Optic atrophy 3 protein (OPA3)
Sequence

GAAGAGTAGCCTTGTCTAGCAAGAAGAAGATAGAGGGATGATGTGATTATACGCAAAATA
CTAAAACCTAGGGTGGTAGTACAAGCAGTAGTTATGAGCAGGCCTCTTCTCTCTCTTTCC
TGTTCCGTTCTTTTTCTTTTTCCCTGCGGAATTCCCCGTCTTCCCTAGTGCCTCGCTTCG
ATATTTCGATTGGATTGGATTACCAAGGGACAGAGGGAGGGAATCCCACACACACCTCTG
GCCCTCGCGAGGCCAAGGGAAGGGAAGCACTCAGCACTCAGCAGCAGAAGGACCGCCGTA
AATGGCGCTGCCGGTGGCGAAGCTGGGGACCCTAGCGCTGCGGACGCTGTCCAAGCCCAT
CGCCAGCCGCCTCAAGAGCCAGGCCGCCGTCCACCCCAAGTTCCGCAACTTCATCATCGC
CATCGCCCAGGCAAACCACCAGATCACCACAAAGATACAAAGGCGCATTTATGGGCATGC
CACAGATGTGGCGATCAGGCCTTTGGATGAGCAGAAAGCTGTTCAAGCTGCTACAGATCT
CATCGGGGAAGCCTTTATCTTCTCGGTCGCTGTTGCTGCTCTAATTTTTGAGGTTCAGAG
AAACGCAAGGTCTGAGGCTAGGAAGGAGGAAGCTCGTAGACAGGAACTTGAGGAATTGAA
ACGAAGGGAAGAGAGTATAGCTAAAGAATTGGAAGATCTTAAATTGAAGCTTAGTGAAAT
TGAGCAGCTTGCTAAAGGGCGAGGCCTGACAGGAATCTTGAACTTGAAACGGGTCCATGG
CACAGAGGTCGGCAAGGCAGCAGCACCTCTGCGTGAGTAAGCAATCCGGCTTTGGCGCAG
GAAAGTATGATTCCTTGTCGCCCCCATTATTTGGTAAGACTTGTGTTGTCGTGCTCAACC
TATTCTTTGGTGCTCATATTGGATCCACATTTGTAGTGGTTGATCCATGGACACCCTGAG
ACAGTGGTAATAATACAGCGTAACAAAGAAATCAAATTAAAGCGCAATATGTATGTGCTA
CTTGGTGGCGGTGACCACAAAATCAGATGTTAAGATGGATTAGGGCTTGTTTGGTTGTAT
ACTTAAGGTGTAAAAAATGCCACGTTTCAGATTAAAGCTGGTTGTTTGGACTGTTGCAAC
TATAAACGATAGAGACAAAAACA