Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039211_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:6:172597219:172606774:1 gene:Zm00001d039211 gene_biotype:protein_coding transcript_biotype:protein_coding description:Notchless-like protein isoform 1%3B Notchless-like protein isoform 2

Sequence

ATGGATATCGATGCCAGCGCCAGCGTCATGTGCCAGCTGCTGAGCCCCGAGGGAGACCCT
CTAGGCTCTGCGCTCTATCTGCCCCAGAACGTCGGGCCCCCGCAGCTCCAGGAGATTGTC
AATCAGCTCCTCCACAATGAGGAGAAGTTGCCCTATGCATTCTACGTTGGAGACGAGGAG
CTCTCTGTCCACCTGGGTGCTTACATGCGGCAGAAGAACGCCAATGTTGAGGTTACTCTG
CGCATAGTATGCCAACCACAAGCACTTTTCCGGATCAGGCCGGTCAACCGATGCTCTGCC
ACGATTGCTGGCCACACGGAAGCTGTAATTGCTGTTTCTTTTAGCCCTGATGGAAAGAGT
TTGGCGAGCGGTTCAGGTGACACCACTGTTCGCTTTTGGGACCTGAGTACACAGACTCCA
CTGTTCACATGCAAAGGTGAATGCTCAGTACCCTATCCTTGTTTACCAGTGATTTTACTG
CAATGCTGTTCATTCCTTAAATTCTGGTCCTTGAGACACAAAAATTGGGTTCTCTGTATT
GCATGGTCACCTGATGGAAAACATCTTGTTAGTGGTAGCAAGTCGGGAGAACTTATATTA
TGGGACCCAAAAACTGGGAACCAATTGGGCACTCCACTTATGGGACACAGGAAATGGATT
ACTGCTGTATCATGGGAGCCAGTTCATTTGCAGTCTCCGTGCCGCCGCTTTGTAAGTGCA
AGCAAGGACGGTGATGCTCGCATTTGGGACATCACCACAAGGAAATGTGTTATTTCCCTT
ACAGGTCACACTAGTTCAGTGACCTGTGTCAAGTGGGGTGGAGATGGTTTGATTTATACT
GGTTCCCAAGATTGTTTAATCAAAGTATGGGAAACTTCTCAGGGAAAGTTGGTCAAAACA
TTGAAGGGTCATGGGCACTGGGTGAATTCGCTTGCTTTGAGCACGGAATATGTTCTCCGT
ACTGGAGCATATGACCACACTGGCAAGACATTTTCGACTGCAGAGGAAATGAAAGAGGCT
GCTCTTGCGAGATACAAGAAGATGAGGGGTAATGCTCCGGAGAGACTAGTTTCTGGTTCT
GATGATTTTACAATGTTTCTTTGGGAACCAACAATTAGTAAACAACCTAAAGCTCGCATG
ACTGGTCATCAGAAGCTTGTAAACCATGTTTACTTTTCCCCTGATGGACAATGGTTGGCA
AGTGCATCCTTTGATAAATCTGTCAAGTTGTGGAATGGTATCACAGGTAAATTTGTTGCA
GCATTCAGAGGGCACGTTGCAGATGTCTACCAGATCAGCTGGTCTGCCGACAGTAGGCTT
CTACTAAGTGGAAGCAAGGATTCCACTCTAAAGATCTGGGATATTCGAACACACAAGTTG
AAAATGGACTTGCCGGGCCACGCGGATGAGGTGTACACCGTGGATTGGAGCCCTGACGGT
GAAAAGGTGGCGTCTGGTGGCAAGGATCGGGTCCTCAAGCTATGGATGAACTGA

Peptide Sequence

PEP ID

Zm00001d039211_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:6:172597219:172606774:1 gene:Zm00001d039211 transcript:Zm00001d039211_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Notchless-like protein isoform 1%3B Notchless-like protein isoform 2

Sequence

MDIDASASVMCQLLSPEGDPLGSALYLPQNVGPPQLQEIVNQLLHNEEKLPYAFYVGDEE
LSVHLGAYMRQKNANVEVTLRIVCQPQALFRIRPVNRCSATIAGHTEAVIAVSFSPDGKS
LASGSGDTTVRFWDLSTQTPLFTCKGECSVPYPCLPVILLQCCSFLKFWSLRHKNWVLCI
AWSPDGKHLVSGSKSGELILWDPKTGNQLGTPLMGHRKWITAVSWEPVHLQSPCRRFVSA
SKDGDARIWDITTRKCVISLTGHTSSVTCVKWGGDGLIYTGSQDCLIKVWETSQGKLVKT
LKGHGHWVNSLALSTEYVLRTGAYDHTGKTFSTAEEMKEAALARYKKMRGNAPERLVSGS
DDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWNGITGKFVA
AFRGHVADVYQISWSADSRLLLSGSKDSTLKIWDIRTHKLKMDLPGHADEVYTVDWSPDG
EKVASGGKDRVLKLWMN

Transcript Sequence

Transcript ID

Zm00001d039211_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:172597219:172606774:1 gene:Zm00001d039211 gene_biotype:protein_coding transcript_biotype:protein_coding description:Notchless-like protein isoform 1%3B Notchless-like protein isoform 2

Sequence

CCCCTCACTTCGCGTGCTCCATTCCCATCTCCCCCCTCCCTGCGCGCAGCCGCACACCAC
CAACACCTTTCACCAGACGCCGCCGCCGCCACCCCCCATCCCTGTCCCGTCCCGCGCGCG
GCCGCCACATCCGTCCGGGCATCCTCGTCTCCCCAGCCCCGCTGCCGCAGGGTTCATCAG
CAGAAGCTGCTTGCACCGCCGCCGCCGCCCTCTTCCTGTTCTACTGATTTTGCTTCGGGT
TCGGCTAAATTTCGTCGGATGGATATCGATGCCAGCGCCAGCGTCATGTGCCAGCTGCTG
AGCCCCGAGGGAGACCCTCTAGGCTCTGCGCTCTATCTGCCCCAGAACGTCGGGCCCCCG
CAGCTCCAGGAGATTGTCAATCAGCTCCTCCACAATGAGGAGAAGTTGCCCTATGCATTC
TACGTTGGAGACGAGGAGCTCTCTGTCCACCTGGGTGCTTACATGCGGCAGAAGAACGCC
AATGTTGAGGTTACTCTGCGCATAGTATGCCAACCACAAGCACTTTTCCGGATCAGGCCG
GTCAACCGATGCTCTGCCACGATTGCTGGCCACACGGAAGCTGTAATTGCTGTTTCTTTT
AGCCCTGATGGAAAGAGTTTGGCGAGCGGTTCAGGTGACACCACTGTTCGCTTTTGGGAC
CTGAGTACACAGACTCCACTGTTCACATGCAAAGGTGAATGCTCAGTACCCTATCCTTGT
TTACCAGTGATTTTACTGCAATGCTGTTCATTCCTTAAATTCTGGTCCTTGAGACACAAA
AATTGGGTTCTCTGTATTGCATGGTCACCTGATGGAAAACATCTTGTTAGTGGTAGCAAG
TCGGGAGAACTTATATTATGGGACCCAAAAACTGGGAACCAATTGGGCACTCCACTTATG
GGACACAGGAAATGGATTACTGCTGTATCATGGGAGCCAGTTCATTTGCAGTCTCCGTGC
CGCCGCTTTGTAAGTGCAAGCAAGGACGGTGATGCTCGCATTTGGGACATCACCACAAGG
AAATGTGTTATTTCCCTTACAGGTCACACTAGTTCAGTGACCTGTGTCAAGTGGGGTGGA
GATGGTTTGATTTATACTGGTTCCCAAGATTGTTTAATCAAAGTATGGGAAACTTCTCAG
GGAAAGTTGGTCAAAACATTGAAGGGTCATGGGCACTGGGTGAATTCGCTTGCTTTGAGC
ACGGAATATGTTCTCCGTACTGGAGCATATGACCACACTGGCAAGACATTTTCGACTGCA
GAGGAAATGAAAGAGGCTGCTCTTGCGAGATACAAGAAGATGAGGGGTAATGCTCCGGAG
AGACTAGTTTCTGGTTCTGATGATTTTACAATGTTTCTTTGGGAACCAACAATTAGTAAA
CAACCTAAAGCTCGCATGACTGGTCATCAGAAGCTTGTAAACCATGTTTACTTTTCCCCT
GATGGACAATGGTTGGCAAGTGCATCCTTTGATAAATCTGTCAAGTTGTGGAATGGTATC
ACAGGTAAATTTGTTGCAGCATTCAGAGGGCACGTTGCAGATGTCTACCAGATCAGCTGG
TCTGCCGACAGTAGGCTTCTACTAAGTGGAAGCAAGGATTCCACTCTAAAGATCTGGGAT
ATTCGAACACACAAGTTGAAAATGGACTTGCCGGGCCACGCGGATGAGGTGTACACCGTG
GATTGGAGCCCTGACGGTGAAAAGGTGGCGTCTGGTGGCAAGGATCGGGTCCTCAAGCTA
TGGATGAACTGATTGATTATTATATATCTATGCTTGGGCGAATTATATATTGTAGTGATG
ATAATTTTGAAGGTATACTGAGATCAATTAATTGTACAAGATCCATGCTTGGCTCAAAAC
TGGAAGAAGCTAGCTGGAAATCATGAGTTCAGTTGGTGGTGCTCTTCTTCTTCTTCTTGT
TCTTCTTCTTGAGGTCCGTGGCATAGTAGTTGCATGTGATGAAGACGCCTCCCTTGAAGC
ACTCTGCTCGTGCGCA