Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039196_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:172328092:172333861:-1 gene:Zm00001d039196 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1 family domain-containing protein MIP3
Sequence	ATGGGGTCCGTGGATCTGATCGCCTCCTGCATCGACTCCATCCGCCAGATTGGAGATGAG ATTGCAGATTCAATAGTGTATATTGACGAGGGCACCTTGGAGGCGTTTCAGTTCATAGGA GGGTTCCCCCTGCTTCTTGAACTCGGTGCTCGTGCTGTGTGCAGCTTGGAGAATGCATCC CCTCTCGATGCTGCAGCTGACTGGCAATCAAGTTTTTCTAATCCACCAAGGAAGATCATA GTACTGATATCACGCCTTCTCAGTGATGCACATCGGTATATTTTGCGATGCCTGAGCAAC CATGGAACCGTTTCACATTGTACTGTACTAACAGCTATTTCAGAGATTGGACACTCAGCA TATGTTGATTCTCCACTCGGGCCAGATGCGTTTCGGGAATATGAAACCTTACTTATTCAG GACCATGATGAGCTTCTTAAGAAGTCTGAGAATTTAGACAGACATAAAGAAAACATTCAT AAAGAGGCGAGTGATTTTACCTCTGACGTTGATAATTATTCTAAGTGGGGTTCTGGGGTG CATTATGGCTCTAATTCTGAATCCAGCCCAACGAAAAGGGATTTTTTTGATGACGAAATG GGCCAGGTAGAAGCAAGAGGGAGAAGACTGTTTGTAGCTGTGCGTCACTTTCCGATGATT TTCTCTCCTATTTCCTCAAGGGTTTTTGTTTTGCCCTCTGAAGGCATAATTGCTGACTCA AGCCTGTCGAATCATCATGAGGATTCCCTTGGCTCTGGTTTACCCTCCATATCTACTGAT AAACCTTTTGATAGTGACGAGGTACCACCAGGAGTGACATTGACTGCCCAGTTTCTGTAC CATTTGGCCAATAAGATGGACCTAAAGCTTGATATATTTTCACTTGGTGATACATCAAAG GTCATTGGAAAGCTGATGATGGATATGTCAAGTCTATATGATGTTGGTCGCAATAAGAGA TCTGCTGGTCTACTGATCGTAGATCGTACAGTTGATCTCCTAACTCCTTGCTTCCATGGT GACTCATTTCTTGATAGGATGCTATCCTTGTTGCCACGCAAGGAAAATATGCCATCCAAT TCTGCAGCGAAAAATCCACAAACTCGAAGTAAGCATTCTCAAGGCACCATTAAACGTTCC CCACTGGATATAAAAGTTCCTTTTGAGACAGTGTTTAGCAAGGAAGAATCAAAGATTAGG AGCAGTATGTTATCTGAAGGTTTCATGTCATTTGCGTCTGGATGGAACTCCGTTGATGTT GACTCTGAAGTTAGCTGGTTACCTGATTACGCTGATAAAGCACATGATCACAAACTTAGC TGTGAACTTGACACTATAAGTGGCTCGTTCCTACCCAATTGTGCTCGAATGCGCTACTTA GAAGCATTGCTAGACAGAGGATCGAAAGATGGGTTAGTACTGATTAAAAAATGGCTTATT GAAGCCTTGCAGCATGGGAAGCTAACATCTGCATCCAAAGGTTGGCAAGGAGCCACTTCT GTTTCAGAGATTCGATCTATGGTGCAAATGCTTTCCCGAGACCAGTTGTCATTGTTAAAA AACAGGGGTGTTATCCAGTTAGCACTAGCTGCTGAAATGACTCTACGGGAGCCTCAAAGT TCTCGCTGGGACGCCTTTACAAGTGCCGAGAGAATATTAAGTGTGACATCTGCAGAGACA CCTCAAAGTCTTGCCAGTGAGCTTCGTGATTTCATCAACACTAGCACTTTAGTTGAATCA CACACACAAACTACTTCAATGGAGTCTTCACAGGGCCTACTTAGTTTCCAGGACGTACTG CTTCTAACGATTATAGGGTATATCTTAGCTGGTGAAAATTTCCCTACATCTATGGCTGGT GGTCCATTTTCTTGGGAAGATGAGCGGTCTCTTAAAGATGTTATAGTGGACTCTATCCTT GAACGACCATCATCTGTGAAGTTGCGCTTCCTTGATGGCCTGGATAGTGAACTTGAAGCT AAAGCTAGATCTAAAGATGGCGAGAGGAATAAAAACTCTAGCGAGGTAGCACCCAGTACT GATGATGATTTTGATGATGAATGGGGTACCTGGGATGACAGTGATAATACTGATCACCAA AAGGAGGAAGCTTATGGGGACATGCAACTTAAGTTGGAAGTGCGAGATAGAGTTGATCAG CTTTTCAAATTCTTTCACAAATTATCCAGTATGAGGTTAAGAAATCAAGCCCTTGGTGAA GGTATAGCAGCATTAAGTAGATTCGAGACTGACGGTTACTCGAGGAAATGCTTGCTTTAT AAGTTACTATTAGCTCTCTTGTCGAGGTACGATGTACCTGGCCTCGAGTATCATTCATCA ACTGTTGGTCGTCTATTCAAAAGTGGACTAGGTAGATTCGGGCTTGGACAGTCTAAACCA GCCTTCGGTGATCAATCTGTTCTTATCATTTTTGTTCTTGGAGGTATTAATACTCTTGAG GTCCGGGAAGTCATGACAGCGATATCGGAGAGCAGCAGACCAGATGTGGAGCTTATTCTG GGTGGGACAACCCTTCTTACCCCAGACGACATGTTTGAGTTGATGTTGGGATCGTCAAGC TTTGCTTAG

Peptide Sequence

PEP ID	Zm00001d039196_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:172328092:172333861:-1 gene:Zm00001d039196 transcript:Zm00001d039196_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1 family domain-containing protein MIP3
Sequence	MGSVDLIASCIDSIRQIGDEIADSIVYIDEGTLEAFQFIGGFPLLLELGARAVCSLENAS PLDAAADWQSSFSNPPRKIIVLISRLLSDAHRYILRCLSNHGTVSHCTVLTAISEIGHSA YVDSPLGPDAFREYETLLIQDHDELLKKSENLDRHKENIHKEASDFTSDVDNYSKWGSGV HYGSNSESSPTKRDFFDDEMGQVEARGRRLFVAVRHFPMIFSPISSRVFVLPSEGIIADS SLSNHHEDSLGSGLPSISTDKPFDSDEVPPGVTLTAQFLYHLANKMDLKLDIFSLGDTSK VIGKLMMDMSSLYDVGRNKRSAGLLIVDRTVDLLTPCFHGDSFLDRMLSLLPRKENMPSN SAAKNPQTRSKHSQGTIKRSPLDIKVPFETVFSKEESKIRSSMLSEGFMSFASGWNSVDV DSEVSWLPDYADKAHDHKLSCELDTISGSFLPNCARMRYLEALLDRGSKDGLVLIKKWLI EALQHGKLTSASKGWQGATSVSEIRSMVQMLSRDQLSLLKNRGVIQLALAAEMTLREPQS SRWDAFTSAERILSVTSAETPQSLASELRDFINTSTLVESHTQTTSMESSQGLLSFQDVL LLTIIGYILAGENFPTSMAGGPFSWEDERSLKDVIVDSILERPSSVKLRFLDGLDSELEA KARSKDGERNKNSSEVAPSTDDDFDDEWGTWDDSDNTDHQKEEAYGDMQLKLEVRDRVDQ LFKFFHKLSSMRLRNQALGEGIAALSRFETDGYSRKCLLYKLLLALLSRYDVPGLEYHSS TVGRLFKSGLGRFGLGQSKPAFGDQSVLIIFVLGGINTLEVREVMTAISESSRPDVELIL GGTTLLTPDDMFELMLGSSSFA

Transcript Sequence

Transcript ID	Zm00001d039196_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:172328092:172333861:-1 gene:Zm00001d039196 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1 family domain-containing protein MIP3
Sequence	CGTTTTGACATTTCCGGGGCGTCCAATAGGAAAATAAAAACATCAGTCGTCTTCTTCAAC CTCTGTCTGCCAGTTGAGGCGCTCGGTGCTGCGTCAGATCGTCGCTGGATTTCGACCGGC TATGCCAGCGACCTGAGCGCGTGGGAGAGTAGGAGGTGTTCGCGCCGGCGGTAGCCCCAC CTCTGTGTTGCGGTAGGTCCTCCCGTTCCCCAAGATCCCTCGCATCGCCGACGCTGGGAG GGTGGCGCCTCGGCGATCTCTCTGCACTTTCTGGAGGATTCTAGGATAAGGGAGACGAGG GGACGGCGTTATGGGGTCCGTGGATCTGATCGCCTCCTGCATCGACTCCATCCGCCAGAT TGGAGATGAGATTGCAGATTCAATAGTGTATATTGACGAGGGCACCTTGGAGGCGTTTCA GTTCATAGGAGGGTTCCCCCTGCTTCTTGAACTCGGTGCTCGTGCTGTGTGCAGCTTGGA GAATGCATCCCCTCTCGATGCTGCAGCTGACTGGCAATCAAGTTTTTCTAATCCACCAAG GAAGATCATAGTACTGATATCACGCCTTCTCAGTGATGCACATCGGTATATTTTGCGATG CCTGAGCAACCATGGAACCGTTTCACATTGTACTGTACTAACAGCTATTTCAGAGATTGG ACACTCAGCATATGTTGATTCTCCACTCGGGCCAGATGCGTTTCGGGAATATGAAACCTT ACTTATTCAGGACCATGATGAGCTTCTTAAGAAGTCTGAGAATTTAGACAGACATAAAGA AAACATTCATAAAGAGGCGAGTGATTTTACCTCTGACGTTGATAATTATTCTAAGTGGGG TTCTGGGGTGCATTATGGCTCTAATTCTGAATCCAGCCCAACGAAAAGGGATTTTTTTGA TGACGAAATGGGCCAGGTAGAAGCAAGAGGGAGAAGACTGTTTGTAGCTGTGCGTCACTT TCCGATGATTTTCTCTCCTATTTCCTCAAGGGTTTTTGTTTTGCCCTCTGAAGGCATAAT TGCTGACTCAAGCCTGTCGAATCATCATGAGGATTCCCTTGGCTCTGGTTTACCCTCCAT ATCTACTGATAAACCTTTTGATAGTGACGAGGTACCACCAGGAGTGACATTGACTGCCCA GTTTCTGTACCATTTGGCCAATAAGATGGACCTAAAGCTTGATATATTTTCACTTGGTGA TACATCAAAGGTCATTGGAAAGCTGATGATGGATATGTCAAGTCTATATGATGTTGGTCG CAATAAGAGATCTGCTGGTCTACTGATCGTAGATCGTACAGTTGATCTCCTAACTCCTTG CTTCCATGGTGACTCATTTCTTGATAGGATGCTATCCTTGTTGCCACGCAAGGAAAATAT GCCATCCAATTCTGCAGCGAAAAATCCACAAACTCGAAGTAAGCATTCTCAAGGCACCAT TAAACGTTCCCCACTGGATATAAAAGTTCCTTTTGAGACAGTGTTTAGCAAGGAAGAATC AAAGATTAGGAGCAGTATGTTATCTGAAGGTTTCATGTCATTTGCGTCTGGATGGAACTC CGTTGATGTTGACTCTGAAGTTAGCTGGTTACCTGATTACGCTGATAAAGCACATGATCA CAAACTTAGCTGTGAACTTGACACTATAAGTGGCTCGTTCCTACCCAATTGTGCTCGAAT GCGCTACTTAGAAGCATTGCTAGACAGAGGATCGAAAGATGGGTTAGTACTGATTAAAAA ATGGCTTATTGAAGCCTTGCAGCATGGGAAGCTAACATCTGCATCCAAAGGTTGGCAAGG AGCCACTTCTGTTTCAGAGATTCGATCTATGGTGCAAATGCTTTCCCGAGACCAGTTGTC ATTGTTAAAAAACAGGGGTGTTATCCAGTTAGCACTAGCTGCTGAAATGACTCTACGGGA GCCTCAAAGTTCTCGCTGGGACGCCTTTACAAGTGCCGAGAGAATATTAAGTGTGACATC TGCAGAGACACCTCAAAGTCTTGCCAGTGAGCTTCGTGATTTCATCAACACTAGCACTTT AGTTGAATCACACACACAAACTACTTCAATGGAGTCTTCACAGGGCCTACTTAGTTTCCA GGACGTACTGCTTCTAACGATTATAGGGTATATCTTAGCTGGTGAAAATTTCCCTACATC TATGGCTGGTGGTCCATTTTCTTGGGAAGATGAGCGGTCTCTTAAAGATGTTATAGTGGA CTCTATCCTTGAACGACCATCATCTGTGAAGTTGCGCTTCCTTGATGGCCTGGATAGTGA ACTTGAAGCTAAAGCTAGATCTAAAGATGGCGAGAGGAATAAAAACTCTAGCGAGGTAGC ACCCAGTACTGATGATGATTTTGATGATGAATGGGGTACCTGGGATGACAGTGATAATAC TGATCACCAAAAGGAGGAAGCTTATGGGGACATGCAACTTAAGTTGGAAGTGCGAGATAG AGTTGATCAGCTTTTCAAATTCTTTCACAAATTATCCAGTATGAGGTTAAGAAATCAAGC CCTTGGTGAAGGTATAGCAGCATTAAGTAGATTCGAGACTGACGGTTACTCGAGGAAATG CTTGCTTTATAAGTTACTATTAGCTCTCTTGTCGAGGTACGATGTACCTGGCCTCGAGTA TCATTCATCAACTGTTGGTCGTCTATTCAAAAGTGGACTAGGTAGATTCGGGCTTGGACA GTCTAAACCAGCCTTCGGTGATCAATCTGTTCTTATCATTTTTGTTCTTGGAGGTATTAA TACTCTTGAGGTCCGGGAAGTCATGACAGCGATATCGGAGAGCAGCAGACCAGATGTGGA GCTTATTCTGGGTGGGACAACCCTTCTTACCCCAGACGACATGTTTGAGTTGATGTTGGG ATCGTCAAGCTTTGCTTAGGCTCAACCTTCACTCTTGAGTCATGTGCGGGACTTGGAAAG AAATCGGAGCATATTTTTTTCTTATTCTCCAGAATAGTTACTTGTCTGATGTAGCAGAAG CATTCAGACTCGGAAGAGGATACTACCAGAAGAAAGCAGTCCATTCAGAGTCAAAATAGT TTGCAAGATGAACCTACGAGTATTGCTGGAAGGTGTAAGAAACAGTGTGTCTAGTTATCA GTGGCTGACTCTTGTTGTAAAACATGTAGCAGAGATATATCAAGCAAAAGATGCGTAAGA ACTCAAGTAATTTGTTTTGTCACTAACATGAGCAGATGCCGTTTGGCTCCATGATGAATT GTTTGTCGGCAGTAACTAACTCGCTCGTAATATTTTACTAAATTAAACTTTTATTATATT ATGTG