Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039194_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:172321981:172324231:-1 gene:Zm00001d039194 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 8 description:RNA polymerase sigma factor sigE chloroplastic/mitochondrial
Sequence	ATGACGTCTACCGTGACGACGCCCAGCCGGCCGCTCGCCGCCGGGAGCCGTCCGCGGCGG TCCGGACCCGCCGTGCTCTCGCTCAGCAAGGGCGGCGGCGGTCAGCGGCGGCAGCGGCGG CTGGCGCCGTCCACGAGCTGCGCCGTGCTCGCGTCGCCCGACAAGCAGAGCACGGCCAAC AAGCTCCCGCTGTCGTCGAGGAAGCAGGAGGAGGAGGTGGAGAAGGCCACGGACTACAAC GAGGTCGCGGCAGCGCTGGAGACCATCTACAAGCTCAGCCCCGCCGTGGAGGTCGAGGAG AAGAAGCGCCAGGGCGGCAATGAAGACGACGGCGGTGGCGAGGCCAAGAAGAAAAGGAAG CGCAGAGTGGCGGGTAGGAGCACGGTGGTCGTGAGGAGCCGGCGTCGGCGTGGCGGGAGG AGGATGGACCTCGGGAAGCGGGTGGAGATGAAGGGCGCGGCCGCCGCTAGCAGAGAGCAG CAGCAGGGGGGAGAGGAGCAAGGAGAGCGCGAGTTCGAGGAGATGCTGCTGCGGGAGCAC TCGGTGTCGACGGACATGGGCAGCCTGGACTGGAAGCGCATGAAGATCCCGCCGGTGCTC ACCTCATCGCAGAGCGCGCGGCTCTTCAAGACCATGCAGCCCATGAAGGCGATCTTCGAA GCGCAGGAGAGCTTGCGAGAGGAGCTGCAGAGGGACCCCACCGACGCGGAGGTCGCCGAG GCCACCGGCATGACCGTCCACCAGCTCCGCCGCCGCCTCGATGTCGGCCGGGCCGCCAGG AACAAGCTCATTAAGCACAACCTCCGGCTGGTGCCGTACGCCCTCAACAAGTACTACCCT GACATGGGCGGCGACGAGAGGTTCGACGAGCTGTGCCAGGCGGGCGCCAACGGGCTGATC ACCGCCATCGATCGGTTCGAGCCGAAGCGCGGCTTCCGCATCTCCACGTACGCGCTCTTC TGGATCCGGCACTCCATCGTGCGCGCCATGACGCTGTCCAGCTTCACCCGCTTCCCGTTC GCCATGGAGTCGGAGCGGCAGGAGATCGGCAGGGCGCGGGAGGAGCTGGCGTTCGAGCTC GGCCGGCCGCCCACGGACGAGGAGGTGCGGGCGAGGGTGGGCCTCTCCCCGCAGAGGTAC CGCGACGTGCTGCGGATGGCCAGGCCCACATACTCGCTGCACGCCCGGAACCGCGTCACG CAGGAGGAGCTCATCGGCGAGGTCACCGACGCCGAAGCCGTCGGGGTCGACGCCGGCGGC AAGCACGACGCGCTGCTCCGCCTCGCCATCGATGACCTCCTGGACTCTCTGAAACCCAAG GAGAGCCTGGTGATCAGGCAGCGGTTCGGCCTGGACGGCAGGGGGAGGCGCACGCTAAGC GAGGTCGCCGGCAACCTCAGCATCTCGCGGGAGATGGTGCGCAAGTACGAGCTCAAGGCG CTCATGAAGCTCAAGCACCCCACAAGGGTGGAATACCTGCGCAGGTACATGTGA

Peptide Sequence

PEP ID	Zm00001d039194_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:172321981:172324231:-1 gene:Zm00001d039194 transcript:Zm00001d039194_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 8 description:RNA polymerase sigma factor sigE chloroplastic/mitochondrial
Sequence	MTSTVTTPSRPLAAGSRPRRSGPAVLSLSKGGGGQRRQRRLAPSTSCAVLASPDKQSTAN KLPLSSRKQEEEVEKATDYNEVAAALETIYKLSPAVEVEEKKRQGGNEDDGGGEAKKKRK RRVAGRSTVVVRSRRRRGGRRMDLGKRVEMKGAAAASREQQQGGEEQGEREFEEMLLREH SVSTDMGSLDWKRMKIPPVLTSSQSARLFKTMQPMKAIFEAQESLREELQRDPTDAEVAE ATGMTVHQLRRRLDVGRAARNKLIKHNLRLVPYALNKYYPDMGGDERFDELCQAGANGLI TAIDRFEPKRGFRISTYALFWIRHSIVRAMTLSSFTRFPFAMESERQEIGRAREELAFEL GRPPTDEEVRARVGLSPQRYRDVLRMARPTYSLHARNRVTQEELIGEVTDAEAVGVDAGG KHDALLRLAIDDLLDSLKPKESLVIRQRFGLDGRGRRTLSEVAGNLSISREMVRKYELKA LMKLKHPTRVEYLRRYM

Transcript Sequence

Transcript ID	Zm00001d039194_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:172321981:172324231:-1 gene:Zm00001d039194 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 8 description:RNA polymerase sigma factor sigE chloroplastic/mitochondrial
Sequence	CATATATGTCGCGGAGGCGCGCGCGTTCCTGCCTGGCTCGAGATTCCGTCCACGCCATTG CGTCGCACTGCCTCCACACGACGACTCCACGAACACGAGCGGCCACAAGACGAGATCCAG GCGGCTGTGTAGCTACGCTGCCATGACGTCTACCGTGACGACGCCCAGCCGGCCGCTCGC CGCCGGGAGCCGTCCGCGGCGGTCCGGACCCGCCGTGCTCTCGCTCAGCAAGGGCGGCGG CGGTCAGCGGCGGCAGCGGCGGCTGGCGCCGTCCACGAGCTGCGCCGTGCTCGCGTCGCC CGACAAGCAGAGCACGGCCAACAAGCTCCCGCTGTCGTCGAGGAAGCAGGAGGAGGAGGT GGAGAAGGCCACGGACTACAACGAGGTCGCGGCAGCGCTGGAGACCATCTACAAGCTCAG CCCCGCCGTGGAGGTCGAGGAGAAGAAGCGCCAGGGCGGCAATGAAGACGACGGCGGTGG CGAGGCCAAGAAGAAAAGGAAGCGCAGAGTGGCGGGTAGGAGCACGGTGGTCGTGAGGAG CCGGCGTCGGCGTGGCGGGAGGAGGATGGACCTCGGGAAGCGGGTGGAGATGAAGGGCGC GGCCGCCGCTAGCAGAGAGCAGCAGCAGGGGGGAGAGGAGCAAGGAGAGCGCGAGTTCGA GGAGATGCTGCTGCGGGAGCACTCGGTGTCGACGGACATGGGCAGCCTGGACTGGAAGCG CATGAAGATCCCGCCGGTGCTCACCTCATCGCAGAGCGCGCGGCTCTTCAAGACCATGCA GCCCATGAAGGCGATCTTCGAAGCGCAGGAGAGCTTGCGAGAGGAGCTGCAGAGGGACCC CACCGACGCGGAGGTCGCCGAGGCCACCGGCATGACCGTCCACCAGCTCCGCCGCCGCCT CGATGTCGGCCGGGCCGCCAGGAACAAGCTCATTAAGCACAACCTCCGGCTGGTGCCGTA CGCCCTCAACAAGTACTACCCTGACATGGGCGGCGACGAGAGGTTCGACGAGCTGTGCCA GGCGGGCGCCAACGGGCTGATCACCGCCATCGATCGGTTCGAGCCGAAGCGCGGCTTCCG CATCTCCACGTACGCGCTCTTCTGGATCCGGCACTCCATCGTGCGCGCCATGACGCTGTC CAGCTTCACCCGCTTCCCGTTCGCCATGGAGTCGGAGCGGCAGGAGATCGGCAGGGCGCG GGAGGAGCTGGCGTTCGAGCTCGGCCGGCCGCCCACGGACGAGGAGGTGCGGGCGAGGGT GGGCCTCTCCCCGCAGAGGTACCGCGACGTGCTGCGGATGGCCAGGCCCACATACTCGCT GCACGCCCGGAACCGCGTCACGCAGGAGGAGCTCATCGGCGAGGTCACCGACGCCGAAGC CGTCGGGGTCGACGCCGGCGGCAAGCACGACGCGCTGCTCCGCCTCGCCATCGATGACCT CCTGGACTCTCTGAAACCCAAGGAGAGCCTGGTGATCAGGCAGCGGTTCGGCCTGGACGG CAGGGGGAGGCGCACGCTAAGCGAGGTCGCCGGCAACCTCAGCATCTCGCGGGAGATGGT GCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACAAGGGTGGAATACCT GCGCAGGTACATGTGATCGGGCTGAGCTGAGCTGAGCTTCTTCTGCTGCTATGGAATGCA TTGTAATCCGAATTCTTCTATTATTATTGTATAATAATACAAGACTATAGCAGATATATA GACGAAATGTACGTGTACAGGAAGACAGGAATGAATGGTGTGTGCGTTTGGGGATCCAGA TGAGTGACTTCATCTTTTAATTTGCATGTAATTAATTCTTAACGTACATACATACGACCG TCGTTTATGTCCATTATCTAGATAAAGTTCAAGAATACGGA