Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039192_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:6:172237504:172245052:1 gene:Zm00001d039192 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 76
Sequence	ATGGTTTACGATGGCGCCGTGAAGGACCAGGACCAGGAGACCGTGGCGGCGAGCACTGCA TCGGCGGCATCGGTGGTGGCGGTGTCGGAGGCGTCTCCCGCGCCGGTGGTGGTGGTGGTC AGTGCGAGGCCCTCGGCGAGGCCGCCGCACGACAAGCGCCTCGGCGTGCGCCACCCCTTG AAGCACCGCTGGTTTCGTGCTGGTGGGAAGATGATGATGGAGCCCGGAGGGGTGCTGCCT GCTCACGCGCATGAGGAGGAGGAGGAGGGAGCCAGCGAGGTGGAAGAGGAGGAGTTAGTG GAGGCGGAGGCCTCGTCCGCGGAGACGGTGACGTGGGGCGCTGAAGTGGAGGTGTCGTCC GCGCCGGCGGCAGGGGTGCAGGAGATGAACGCGGAGGTGGAGGGTGGCGAAATGGAGGTG TCGCCTGAGCCTGCGGTCGCTGTGGGGGGCACCGAGTTGGAGCCCCAGCAGGACGACGAG GACGAGGTCTCGTCCGTCGTGTTGGCGCGAGGGGAGAGGAAGCAGGAGGCGGCTCCTGCT TCTGCGGTGCTAGCTGTGGAGGCGCCCATGGAAATGGGTCAGGATGAGGAGAGGGCGGAG AAGGAGAAGAGGGGCAAGGAGAGGGAAAGGCAGAAGGAGCGGGAGAGGGTGGATGAGGTC GGCTACATGAGCGGAGGATGGAAGAGTGTTGATGGAACACTGAATTGTGGATATTCAAGT TTTAGAGGAAGAAGGGCAAGCATGGAAGATTTCTATGATATAAAAGCATCTAAAATTGAT GATAAACAAATAAATCTCTTCGGAATTTTTGATGGTCATGGTGGTTCACGTGCTGCTGAG TATTTGAAGGAGCACTTGTTTGAGAACCTCATGAAACATCCGGAGTTCATGACAAATACA AAATTAGCATTAAGTGAAACATATAGAAAGACCGATTCAGAGTTTTTGGATGCTGAAAGG AATACTCATAGAGATGATGGGTCAACGGCATCGACAGCAGTGATGGTTGCTGATCATCTT TACGTGGCAAATGTTGGAGACTCGAGGGCTGTTATATCAAAGGCTGGCAAAGCTATTGCG CTCTCTGAAGATCACAAGCCAAACAGAAGTGATGAGAGGAATCGAATTGAGAGTGCTGGT GGGATAGTTATGTGGGCAGGAACTTGGAGGGTAGGTGGTGTACTTGCGATGTCTCGGGCA TTTGGCAACCGTCTCTTAAAACAATTTGTTATTGCAGACCCTGAAATTCAGGAACAAGAA ATAAATGAGGAGTTGGAGTTTCTAATTATAGCTAGTGATGGGCTGTGGGATGTGGTTTCG AATGAGGACGCTGTTACACTTGTGAAAATGGAGGAGGAACCAGAGGCTGCAGCTCGGAAG CTGACAGAGACCGCGTTCTCTCGCGGGAGCGGCGATAACATCACGTGCATCGTGGTGAAG TTCCAGCATGACAAGCCGCGCAGTGGCGGTGGCGATTCCCCTTCCTCGCCTCGTCTCTAG

Peptide Sequence

PEP ID	Zm00001d039192_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:6:172237504:172245052:1 gene:Zm00001d039192 transcript:Zm00001d039192_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 76
Sequence	MVYDGAVKDQDQETVAASTASAASVVAVSEASPAPVVVVVSARPSARPPHDKRLGVRHPL KHRWFRAGGKMMMEPGGVLPAHAHEEEEEGASEVEEEELVEAEASSAETVTWGAEVEVSS APAAGVQEMNAEVEGGEMEVSPEPAVAVGGTELEPQQDDEDEVSSVVLARGERKQEAAPA SAVLAVEAPMEMGQDEERAEKEKRGKERERQKERERVDEVGYMSGGWKSVDGTLNCGYSS FRGRRASMEDFYDIKASKIDDKQINLFGIFDGHGGSRAAEYLKEHLFENLMKHPEFMTNT KLALSETYRKTDSEFLDAERNTHRDDGSTASTAVMVADHLYVANVGDSRAVISKAGKAIA LSEDHKPNRSDERNRIESAGGIVMWAGTWRVGGVLAMSRAFGNRLLKQFVIADPEIQEQE INEELEFLIIASDGLWDVVSNEDAVTLVKMEEEPEAAARKLTETAFSRGSGDNITCIVVK FQHDKPRSGGGDSPSSPRL

Transcript Sequence

Transcript ID	Zm00001d039192_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:172237504:172245052:1 gene:Zm00001d039192 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 76
Sequence	CATCCGATCTCCTTCTCACCTCCTCACCTCAGGCGCACACCGATCACTCTCTTCCCTCCT CCAGCAGTCCAGCTCACACCCACCGCCCCACCCCTTCCACTCAAATCCAGGGACATCGCA GATCCACCGGCTCTCCGATCCGCTCGCCTCCGCACCCGCCCGATCGGATCCCGCAGGTTT TGTGCCCGCCACGAGTTAGATGGTTTACGATGGCGCCGTGAAGGACCAGGACCAGGAGAC CGTGGCGGCGAGCACTGCATCGGCGGCATCGGTGGTGGCGGTGTCGGAGGCGTCTCCCGC GCCGGTGGTGGTGGTGGTCAGTGCGAGGCCCTCGGCGAGGCCGCCGCACGACAAGCGCCT CGGCGTGCGCCACCCCTTGAAGCACCGCTGGTTTCGTGCTGGTGGGAAGATGATGATGGA GCCCGGAGGGGTGCTGCCTGCTCACGCGCATGAGGAGGAGGAGGAGGGAGCCAGCGAGGT GGAAGAGGAGGAGTTAGTGGAGGCGGAGGCCTCGTCCGCGGAGACGGTGACGTGGGGCGC TGAAGTGGAGGTGTCGTCCGCGCCGGCGGCAGGGGTGCAGGAGATGAACGCGGAGGTGGA GGGTGGCGAAATGGAGGTGTCGCCTGAGCCTGCGGTCGCTGTGGGGGGCACCGAGTTGGA GCCCCAGCAGGACGACGAGGACGAGGTCTCGTCCGTCGTGTTGGCGCGAGGGGAGAGGAA GCAGGAGGCGGCTCCTGCTTCTGCGGTGCTAGCTGTGGAGGCGCCCATGGAAATGGGTCA GGATGAGGAGAGGGCGGAGAAGGAGAAGAGGGGCAAGGAGAGGGAAAGGCAGAAGGAGCG GGAGAGGGTGGATGAGGTCGGCTACATGAGCGGAGGATGGAAGAGTGTTGATGGAACACT GAATTGTGGATATTCAAGTTTTAGAGGAAGAAGGGCAAGCATGGAAGATTTCTATGATAT AAAAGCATCTAAAATTGATGATAAACAAATAAATCTCTTCGGAATTTTTGATGGTCATGG TGGTTCACGTGCTGCTGAGTATTTGAAGGAGCACTTGTTTGAGAACCTCATGAAACATCC GGAGTTCATGACAAATACAAAATTAGCATTAAGTGAAACATATAGAAAGACCGATTCAGA GTTTTTGGATGCTGAAAGGAATACTCATAGAGATGATGGGTCAACGGCATCGACAGCAGT GATGGTTGCTGATCATCTTTACGTGGCAAATGTTGGAGACTCGAGGGCTGTTATATCAAA GGCTGGCAAAGCTATTGCGCTCTCTGAAGATCACAAGCCAAACAGAAGTGATGAGAGGAA TCGAATTGAGAGTGCTGGTGGGATAGTTATGTGGGCAGGAACTTGGAGGGTAGGTGGTGT ACTTGCGATGTCTCGGGCATTTGGCAACCGTCTCTTAAAACAATTTGTTATTGCAGACCC TGAAATTCAGGAACAAGAAATAAATGAGGAGTTGGAGTTTCTAATTATAGCTAGTGATGG GCTGTGGGATGTGGTTTCGAATGAGGACGCTGTTACACTTGTGAAAATGGAGGAGGAACC AGAGGCTGCAGCTCGGAAGCTGACAGAGACCGCGTTCTCTCGCGGGAGCGGCGATAACAT CACGTGCATCGTGGTGAAGTTCCAGCATGACAAGCCGCGCAGTGGCGGTGGCGATTCCCC TTCCTCGCCTCGTCTCTAGGCGACAGGAGTTGATTCCATTTGTTTTTGGTTATACGTGTT GTCGGGGTCCTTTTTACCTTGAGCCGGATTTTGCTGGCCCCCGAGGCTGATACTTGAGAA AAGGAGTCGGTTCATGTTCATTGCCTGTCTTGTCTATATATGCCCCCCTCCCTAATTTTG CTTCTCCGGTGGCAGTGCTGCCCATTGGCATGCACATCGTCGGCATTGTCGTAGACTTGT AGTTTGCTGTTGTATCAGTGAGAGAGAGAGTTAATTCTGTGAGGTGTTCATTTTGAGATG TCACTGGACCGATCTTCAGTCCAGCTAGATCCGTAAGATGTGCAGTGCATAATCTCGTAG AGGTGATGATATTCGTCAGAAGAATCAGTGAGAGATTACCGTGTCACATTACTGTGTTTT TCTAATGTAATGGGTGTACTGTTTCTATATATGTGTGTATATAGTCT