Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039181_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:172035940:172039648:-1 gene:Zm00001d039181 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 7 description:RNA polymerase sigma factor sigC
Sequence	ATGCTTGCTTGCAGATGTTGCTGTTATCGCCTTGGGGGTGATTATTCTGTCCTGTGCTCT AATGATGCTCGGAATGATGATGGAACTCCCCGTCAGTGCGCCTGGTTAATCACAATGAAC GGAGGAAGGGCAATCTCCTCTGAATCCCTCGCGGCACTGGCATGGCATTTCCTGCTAAGG CGTCGCAGCAGGGACGGTGCCACAGCTCTCGCATCTTCATCCGGGGTGCTTCAAATCGCA GAGGACAAATCATCTGCGGCCAACTTGACAAAGCACAAGGTGAGTGCAGAAAGGAAGCTC CTCAACGACGCTCTTGACAGAACTGGTGTGCGATATGAGACTGAGAGCTGGATGGATGAA GAGACATCGTCCTGGATGGACAGGGATCTCACGGACAGCGATTTGCGGTACCGCTTGCTA ATGCAGAACCTCGAGGAACTGGAGACCAGCTTGGTTGGTAAAGACCTGGAGATGGACATC CTTGAGCAGCTTGGGGCTCTGGGATCGTTCAACGCTTCTGTGGCCAGGGGTGTCTCGGCG TTACATGGTCGACCAGATGGCTCTCTGCTTGATGATCCGGAGCCGGAGACGACTCCTCTG GATGCGGGGCAAGAAGACAGCCAAGTGGTCGTCGTCCGGAGTGGCAAGAGCCAGGAGAGG AAGCTGAGAAGGATGAGAGCATCATCAGATGAGAAAGGATCCAGGACCTCGGTGAAGGTG AACCCACCACGAAGACCCAAGAAATCCCGTAAGGCGAGTAGCAGCCAGTTTATATCCGAG TGGAAAAGTCACCCAGGCCAAAGGAGGATCATTGTGCGTGAGCAATCAGCACTGCTGTCC ACCATCAAGGAATGTGCAGGTCTTGAGAAGATAAGGGAGAAGATGGTGAAGGAAGGGCAG GAGGTGAGCTACCACAGGTGGGCGGAGGCAGCTGGGGTGGACGAGGCAGAGCTGGTGAGC AGGCTGCAGGCAGGTTACTGCTGCCGGGACAGGCTACTGGTGACCACCGAGTGGCTGGTC AGGTGCATCGCGAGAACATACACCGGCATGGGGACGGCCTTGGACGATCTGCTTCAGGCT GGGAAGATGGGCGTTCTTGACGGCGCCGAGAAGTTCGACAGCCGGAAGGGGTGCAGGTTC TCCACGTACGTCAAGTACTGGATCAGGAAAGGGATGCTCGCTCTGCTGGCTGAAAACTCA GGAGTCACCCTGCTGCCTGCAAGAATGGAGAGCATCATGCGCAAGGTGAAGGAGGCGCGG CGTGGGATCCGGTACAGGCAGGGCAGGAACCCGTCGGACTCAGAGGTTGCCGCCGCCGTG GGCGTGTCGGTAGCCAACGTGAGGCTGGCGCGCAAGTGCTCTCGCAGGGCCGTCTCGCTC TACTCGGAGGTCGCGATCGGACAGGACGTCAAGTTCGCGGAGGTGATCCCGGACGAGTCG GCGTCTCCGGACGAGGCGGCGCTGTTCCGGGGCCAGCTGAGGGAGCGGCTGCTGCTGGTG CTGGGCAGGCTGCCCGCGCGGGAAGGACGCGTGCTGCGGCTGCGGCACGGGCTGGAGGAC GGGCGGTGCAGGTCGCTGGAGGAGATCGGCGGCATCTACGGCGTCTCCAAGGAGTGGATC AGGAAGATCGAGAAGTCGGCCATGGCCAGGCTCCGGGACGACGACGCCGTGCGCCGCGAC CTCCACGACTTCGTCTAG

Peptide Sequence

PEP ID	Zm00001d039181_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:172035940:172039648:-1 gene:Zm00001d039181 transcript:Zm00001d039181_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 7 description:RNA polymerase sigma factor sigC
Sequence	MLACRCCCYRLGGDYSVLCSNDARNDDGTPRQCAWLITMNGGRAISSESLAALAWHFLLR RRSRDGATALASSSGVLQIAEDKSSAANLTKHKVSAERKLLNDALDRTGVRYETESWMDE ETSSWMDRDLTDSDLRYRLLMQNLEELETSLVGKDLEMDILEQLGALGSFNASVARGVSA LHGRPDGSLLDDPEPETTPLDAGQEDSQVVVVRSGKSQERKLRRMRASSDEKGSRTSVKV NPPRRPKKSRKASSSQFISEWKSHPGQRRIIVREQSALLSTIKECAGLEKIREKMVKEGQ EVSYHRWAEAAGVDEAELVSRLQAGYCCRDRLLVTTEWLVRCIARTYTGMGTALDDLLQA GKMGVLDGAEKFDSRKGCRFSTYVKYWIRKGMLALLAENSGVTLLPARMESIMRKVKEAR RGIRYRQGRNPSDSEVAAAVGVSVANVRLARKCSRRAVSLYSEVAIGQDVKFAEVIPDES ASPDEAALFRGQLRERLLLVLGRLPAREGRVLRLRHGLEDGRCRSLEEIGGIYGVSKEWI RKIEKSAMARLRDDDAVRRDLHDFV

Transcript Sequence

Transcript ID	Zm00001d039181_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:172035940:172039648:-1 gene:Zm00001d039181 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 7 description:RNA polymerase sigma factor sigC
Sequence	TCCTCTGAAACCCTAAAAAACCCAATCTATTTGTTTCCGCCGCCGTGTCTGTCTCGGCCC AGGCAAGCCACCGCATGCACCGCCGTCGCTCACACCGTTCCAGCGCCTCGTACCCTCACT GACGTAGTGCGCGCTGCTCCGCCAACGCCCCCAGCGACCCAAACAGACTCCGACCCGCGC CGTCCGTTCCGTGTCCGGCCTCGCCGCCGATTCTCTCGGAGCTCCTGCCCTGCCGTGCGG GAGCACTTCTTCGAACAGATGGAGGCTCGCCGCGCGAGGCCGAGCAACCAGACGCACTCC AGCTGTTGGACGAATCCCTCCTCCTCCACGCCAGGCCCTGCGTCGCCTGAATTCCTCACT ACGGTCCGCGGAGCAGCATTTTGCGGCCGTGGCTTCGCCTCCGCCACAGCAAGGTTGTCG TCATACTCCTTTTTATGTGTGAAGAAGGAGAGGAGGTGCTTATCGTAGTCAGTGACAGTG GTGGATCCAGCAGCTCTTGTGGAAAGCGGCGGAGGGGAGTTGACAGTAACAACAGCAACA ACCGCGGAAGGGGGTGTGATGCTTGCTTGCAGATGTTGCTGTTATCGCCTTGGGGGTGAT TATTCTGTCCTGTGCTCTAATGATGCTCGGAATGATGATGGAACTCCCCGTCAGTGCGCC TGGTTAATCACAATGAACGGAGGAAGGGCAATCTCCTCTGAATCCCTCGCGGCACTGGCA TGGCATTTCCTGCTAAGGCGTCGCAGCAGGGACGGTGCCACAGCTCTCGCATCTTCATCC GGGGTGCTTCAAATCGCAGAGGACAAATCATCTGCGGCCAACTTGACAAAGCACAAGGTG AGTGCAGAAAGGAAGCTCCTCAACGACGCTCTTGACAGAACTGGTGTGCGATATGAGACT GAGAGCTGGATGGATGAAGAGACATCGTCCTGGATGGACAGGGATCTCACGGACAGCGAT TTGCGGTACCGCTTGCTAATGCAGAACCTCGAGGAACTGGAGACCAGCTTGGTTGGTAAA GACCTGGAGATGGACATCCTTGAGCAGCTTGGGGCTCTGGGATCGTTCAACGCTTCTGTG GCCAGGGGTGTCTCGGCGTTACATGGTCGACCAGATGGCTCTCTGCTTGATGATCCGGAG CCGGAGACGACTCCTCTGGATGCGGGGCAAGAAGACAGCCAAGTGGTCGTCGTCCGGAGT GGCAAGAGCCAGGAGAGGAAGCTGAGAAGGATGAGAGCATCATCAGATGAGAAAGGATCC AGGACCTCGGTGAAGGTGAACCCACCACGAAGACCCAAGAAATCCCGTAAGGCGAGTAGC AGCCAGTTTATATCCGAGTGGAAAAGTCACCCAGGCCAAAGGAGGATCATTGTGCGTGAG CAATCAGCACTGCTGTCCACCATCAAGGAATGTGCAGGTCTTGAGAAGATAAGGGAGAAG ATGGTGAAGGAAGGGCAGGAGGTGAGCTACCACAGGTGGGCGGAGGCAGCTGGGGTGGAC GAGGCAGAGCTGGTGAGCAGGCTGCAGGCAGGTTACTGCTGCCGGGACAGGCTACTGGTG ACCACCGAGTGGCTGGTCAGGTGCATCGCGAGAACATACACCGGCATGGGGACGGCCTTG GACGATCTGCTTCAGGCTGGGAAGATGGGCGTTCTTGACGGCGCCGAGAAGTTCGACAGC CGGAAGGGGTGCAGGTTCTCCACGTACGTCAAGTACTGGATCAGGAAAGGGATGCTCGCT CTGCTGGCTGAAAACTCAGGAGTCACCCTGCTGCCTGCAAGAATGGAGAGCATCATGCGC AAGGTGAAGGAGGCGCGGCGTGGGATCCGGTACAGGCAGGGCAGGAACCCGTCGGACTCA GAGGTTGCCGCCGCCGTGGGCGTGTCGGTAGCCAACGTGAGGCTGGCGCGCAAGTGCTCT CGCAGGGCCGTCTCGCTCTACTCGGAGGTCGCGATCGGACAGGACGTCAAGTTCGCGGAG GTGATCCCGGACGAGTCGGCGTCTCCGGACGAGGCGGCGCTGTTCCGGGGCCAGCTGAGG GAGCGGCTGCTGCTGGTGCTGGGCAGGCTGCCCGCGCGGGAAGGACGCGTGCTGCGGCTG CGGCACGGGCTGGAGGACGGGCGGTGCAGGTCGCTGGAGGAGATCGGCGGCATCTACGGC GTCTCCAAGGAGTGGATCAGGAAGATCGAGAAGTCGGCCATGGCCAGGCTCCGGGACGAC GACGCCGTGCGCCGCGACCTCCACGACTTCGTCTAGTCTGTCTGCAGTGCACTAGAACAA TTTGTTAGCTGGTAGGGAACGATGTCATGTACGTAGTACCATACTATCTATCAGCAGACT GAAATTGAAGCTGCTATTCACACGAAATATACAATGATAGAGATTTGTGATTCATGACGG TTATAATGTCATGCTTGCTTTCATGTTTCAC