Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039179_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:171880132:171881868:-1 gene:Zm00001d039179 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCTGCCATCCACCTGCGCCCGCTCCGCTCCGTCGCCGTCTCCTCCGCGAGGTACCGC TCGCTTCTCCACCTTCTCGCCCGCCCCCTCTCCTCTTCCCAATCGTCCCACGCCTACCAC CCTTTCCCCACCCCGGCCGCCGCCGCCCCCAACCATGTTCACCACCACCACCCTACCCAC CACAGCCAGCAGCAGTCGGCGCCGCCGAGGAACCCGCCTCCCCTTGGCCCCTCTCCGCAG TGGTCCCCGCAGCCTCCGCCGCCCCGCGGCTATGGGCCTCCACCGCCGCAGCACCCGCAT GTGCCGCCGCCGCCGCCACGCGGCTACGGACCTCTATCACCGGGACAGCACTTGCCGCCT TCGCCACACGGCTACGGCCCTCCACTGCCGCCGCCGCCACCACCACACGGCCACGGACCT CCGCCACCAGGACAGCATGTTGTGCCGCCGCTGCCTCCATCACACGGCCACAGACCTCCA CCATCGTGCCAGCATGTGCCACCGCCGCCGCCATCGCACGGTCACGGACCTCCGCCACCG GGCCAGTACGTGCCGTCTGCGCTGCCACGCGACCACGGGCCTCCACCCCCGCACCAGCAG GCACCGCCTCCACCGCCGCCGCCTGAGCCTGTAGCGGGGCCTGGGGAGCTGATGGGATTG TGCCGGGAGGGTCGGGTGAAGGACGCCGTGGAGCTTCTGGACAAGGGGGCGTGCGCCGAC CCAGCCGCCTTCTACGAGCTCGCGGCAGCCTGCTCCAACCCTAAGCTGCTGGAGGAGCTC AGGAAGGTGCACGACTTCTTCCTCCGCTCACCCTTCCGCGGCGATCTACGGGTCAACAAC AAGCTGCTAAAGATGTACGCCAAGTGTGCAGCCATGCCCCACGCCCGCAGGACGTTCGAC AATATGCCTGACCGCGACATGGACTCGTGGCACATCGTGATCGATGGCTACTCGGTCAAT GGGCTCGGGGACGAGGCGCTGCGACTGTTCGAGCTGATGAAGGAGTGTATGTCACCCACC AGCCATACCTACCTGCTTGTGCTCAATGCTTGTGCCAATTCCGAGGCCATTGAGGAGGCG CTCCTTTACTTTGATGCCATGCACAGGGACCATGGCATTGAGCCTGGTGTGGAGCACTAT GTTGGAATCATTGAGGTTTTGGGGAAGTCAGGGCACCTCAATGAGGCCCTGGAGTTCATT GAGAAGCTGCCGTTTGAGCCCAATGCCATGGTGTGGGAGTCGCTCTTAAACCTGGCCCGG ATGAATGGAGACATTGATCTTGAGGACCGGGCAGAGGAGTTGTTGGTGTCACTTGATCCA TCCAAGTCAAACCATAAGAAGCTCCCAACCCCACCTCCAAAGAGGCGTCTGGGAATTAAC ATGCTTGATGGGAGGAACAAGCTAGTAGAGTATAGGCTTCCACCAAAGATTGAAAAGAAG GTGGTCAATGAGCAGAGGTACGTCCCAGACACAAGATATGTGCTCCATGACATTGACCAG GAGGCCAAGGAACAGGCATTGCTGTACCACAGTGAGAGGCTGGCAATTGCTTATGGTCTG ATTAGCACCCCAGCAAGGACTCCACTTCGCATCATTAAGAACCTGAGGATATGTGGGGAC TGCCACAATGCCATCAAGATCATGTCAAGGATAGTTGGGAGAGAGCTCATTGTGAGGGAC AATAAGAGGTTTCACCATTTCAAGGATGGAAAGTGCTCCTGTGGAGATTATTGGTGA

Peptide Sequence

PEP ID	Zm00001d039179_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:171880132:171881868:-1 gene:Zm00001d039179 transcript:Zm00001d039179_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MAAIHLRPLRSVAVSSARYRSLLHLLARPLSSSQSSHAYHPFPTPAAAAPNHVHHHHPTH HSQQQSAPPRNPPPLGPSPQWSPQPPPPRGYGPPPPQHPHVPPPPPRGYGPLSPGQHLPP SPHGYGPPLPPPPPPHGHGPPPPGQHVVPPLPPSHGHRPPPSCQHVPPPPPSHGHGPPPP GQYVPSALPRDHGPPPPHQQAPPPPPPPEPVAGPGELMGLCREGRVKDAVELLDKGACAD PAAFYELAAACSNPKLLEELRKVHDFFLRSPFRGDLRVNNKLLKMYAKCAAMPHARRTFD NMPDRDMDSWHIVIDGYSVNGLGDEALRLFELMKECMSPTSHTYLLVLNACANSEAIEEA LLYFDAMHRDHGIEPGVEHYVGIIEVLGKSGHLNEALEFIEKLPFEPNAMVWESLLNLAR MNGDIDLEDRAEELLVSLDPSKSNHKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKK VVNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGD CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW

Transcript Sequence

Transcript ID	Zm00001d039179_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:171880132:171881868:-1 gene:Zm00001d039179 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCTGCCATCCACCTGCGCCCGCTCCGCTCCGTCGCCGTCTCCTCCGCGAGGTACCGC TCGCTTCTCCACCTTCTCGCCCGCCCCCTCTCCTCTTCCCAATCGTCCCACGCCTACCAC CCTTTCCCCACCCCGGCCGCCGCCGCCCCCAACCATGTTCACCACCACCACCCTACCCAC CACAGCCAGCAGCAGTCGGCGCCGCCGAGGAACCCGCCTCCCCTTGGCCCCTCTCCGCAG TGGTCCCCGCAGCCTCCGCCGCCCCGCGGCTATGGGCCTCCACCGCCGCAGCACCCGCAT GTGCCGCCGCCGCCGCCACGCGGCTACGGACCTCTATCACCGGGACAGCACTTGCCGCCT TCGCCACACGGCTACGGCCCTCCACTGCCGCCGCCGCCACCACCACACGGCCACGGACCT CCGCCACCAGGACAGCATGTTGTGCCGCCGCTGCCTCCATCACACGGCCACAGACCTCCA CCATCGTGCCAGCATGTGCCACCGCCGCCGCCATCGCACGGTCACGGACCTCCGCCACCG GGCCAGTACGTGCCGTCTGCGCTGCCACGCGACCACGGGCCTCCACCCCCGCACCAGCAG GCACCGCCTCCACCGCCGCCGCCTGAGCCTGTAGCGGGGCCTGGGGAGCTGATGGGATTG TGCCGGGAGGGTCGGGTGAAGGACGCCGTGGAGCTTCTGGACAAGGGGGCGTGCGCCGAC CCAGCCGCCTTCTACGAGCTCGCGGCAGCCTGCTCCAACCCTAAGCTGCTGGAGGAGCTC AGGAAGGTGCACGACTTCTTCCTCCGCTCACCCTTCCGCGGCGATCTACGGGTCAACAAC AAGCTGCTAAAGATGTACGCCAAGTGTGCAGCCATGCCCCACGCCCGCAGGACGTTCGAC AATATGCCTGACCGCGACATGGACTCGTGGCACATCGTGATCGATGGCTACTCGGTCAAT GGGCTCGGGGACGAGGCGCTGCGACTGTTCGAGCTGATGAAGGAGTGTATGTCACCCACC AGCCATACCTACCTGCTTGTGCTCAATGCTTGTGCCAATTCCGAGGCCATTGAGGAGGCG CTCCTTTACTTTGATGCCATGCACAGGGACCATGGCATTGAGCCTGGTGTGGAGCACTAT GTTGGAATCATTGAGGTTTTGGGGAAGTCAGGGCACCTCAATGAGGCCCTGGAGTTCATT GAGAAGCTGCCGTTTGAGCCCAATGCCATGGTGTGGGAGTCGCTCTTAAACCTGGCCCGG ATGAATGGAGACATTGATCTTGAGGACCGGGCAGAGGAGTTGTTGGTGTCACTTGATCCA TCCAAGTCAAACCATAAGAAGCTCCCAACCCCACCTCCAAAGAGGCGTCTGGGAATTAAC ATGCTTGATGGGAGGAACAAGCTAGTAGAGTATAGGCTTCCACCAAAGATTGAAAAGAAG GTGGTCAATGAGCAGAGGTACGTCCCAGACACAAGATATGTGCTCCATGACATTGACCAG GAGGCCAAGGAACAGGCATTGCTGTACCACAGTGAGAGGCTGGCAATTGCTTATGGTCTG ATTAGCACCCCAGCAAGGACTCCACTTCGCATCATTAAGAACCTGAGGATATGTGGGGAC TGCCACAATGCCATCAAGATCATGTCAAGGATAGTTGGGAGAGAGCTCATTGTGAGGGAC AATAAGAGGTTTCACCATTTCAAGGATGGAAAGTGCTCCTGTGGAGATTATTGGTGA