Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039157_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:6:171239165:171243031:-1 gene:Zm00001d039157 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C
Sequence

ATGGCGACACGCTACTGGATCGTGTCTCTGCCCGTGCAGTCACCTGGCGCCATCGCAAGC
TCCCTGTGGTCTCGCCTCCAGGACTCCATCTCCCGCCACTCCTTCGACACTCCGCTCTAC
CGCTTCAACGTCCCGGATCTCCGCGTCGGCACCCTCGACTCGCTTCTCGCCCTCAGCGAC
GACCTCGTCAAGTCCAATGTTTTCGTGGAGGGCGTGTCACACAAGATCCGGAGGCAGATC
GAGGACCTCGAGCGCGCCGGAGGGGTCGAGAGTGGGACCCTCACCGTCGATGGCGTTCCT
GTCGACACCTACCTCACCAGGTTCGTGTGGGATGAGGGCAAATACCCCACAATGTCTCCG
CTCAAGGAGATTGTTGGCAGCATCCAGTCACAGGTTGCCAAGATTGAGGATGATATGAAG
GTGCGAGCAGCGGAATATAATAATGTAAGGAGCCAGCTTAGTGCAATCAACAGAAAGCAA
AGTGGGAGCTTAGCGGTTCGTGATCTTTCCAATCTGGTAAAACCGGAGGATATGATCACC
TCGGAACATCTTGTGACACTTCTTGCAATCGTTCCCAAGTACTCCCAAAAAGACTGGCTG
TCAAGCTATGAGACACTTGATACATTTGTGGTACCTAGGTCATCTAAAAAGCTCTATGAA
GACAACGAATATGCTCTCTACACTGTGACACTATTTGCTAAGGTTGTTGACAACTTTAAG
GTCCGTGCTCGCGAGAAGGGTTTTCAGATCCGTGATTTCGAGTACAGTCCTGAAGCACAG
GAAAGCCGGATGCAGGAGATGGAGAAGCTACTGCGAGACCAAGAAGCTATGAGGACCACT
CTTCTTCAGTGGTGTTATGCCAGCTACAGCGAGGTATTCAGTTCCTGGATGCACTTTTGT
GCTGTGCGTGTCTTTGTGGAGAGCATTCTTAGATATGGTCTGCCGCCATCATTCCTGTCT
GCTGTTCTTGCACCATCTACAAAGAGCGAGAAGAAAGTAAGGAGCATCTTAGACGAGCTC
TCTGGCGATGCCCATAGCCTGTATTGGAAATCCGAAGACGATGTAGGCGTTGCTGGTCTG
GGAGGCGAAACCGAGGCGCACCCTTACGTCTCCTTCACCATAAATTTTGTCTGA

Peptide Sequence

PEP ID

Zm00001d039157_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:6:171239165:171243031:-1 gene:Zm00001d039157 transcript:Zm00001d039157_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C
Sequence

MATRYWIVSLPVQSPGAIASSLWSRLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSD
DLVKSNVFVEGVSHKIRRQIEDLERAGGVESGTLTVDGVPVDTYLTRFVWDEGKYPTMSP
LKEIVGSIQSQVAKIEDDMKVRAAEYNNVRSQLSAINRKQSGSLAVRDLSNLVKPEDMIT
SEHLVTLLAIVPKYSQKDWLSSYETLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFK
VRAREKGFQIRDFEYSPEAQESRMQEMEKLLRDQEAMRTTLLQWCYASYSEVFSSWMHFC
AVRVFVESILRYGLPPSFLSAVLAPSTKSEKKVRSILDELSGDAHSLYWKSEDDVGVAGL
GGETEAHPYVSFTINFV

Transcript Sequence

Transcript ID

Zm00001d039157_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:171239165:171243031:-1 gene:Zm00001d039157 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit C
Sequence

GACATGTCCTGCTCCTCTGAATTCTGATCCGTGCGGTGCGGCCGTGCGGGTGTCCGTCTC
CTCCATTGCGAAGCCGCGAGCTCCTGCGTCAACCAGATCACACGAACCAAACCAGCGCCT
CCTCCCCCGAGTCTCACCGCCAGCGCCCATGGCGACACGCTACTGGATCGTGTCTCTGCC
CGTGCAGTCACCTGGCGCCATCGCAAGCTCCCTGTGGTCTCGCCTCCAGGACTCCATCTC
CCGCCACTCCTTCGACACTCCGCTCTACCGCTTCAACGTCCCGGATCTCCGCGTCGGCAC
CCTCGACTCGCTTCTCGCCCTCAGCGACGACCTCGTCAAGTCCAATGTTTTCGTGGAGGG
CGTGTCACACAAGATCCGGAGGCAGATCGAGGACCTCGAGCGCGCCGGAGGGGTCGAGAG
TGGGACCCTCACCGTCGATGGCGTTCCTGTCGACACCTACCTCACCAGGTTCGTGTGGGA
TGAGGGCAAATACCCCACAATGTCTCCGCTCAAGGAGATTGTTGGCAGCATCCAGTCACA
GGTTGCCAAGATTGAGGATGATATGAAGGTGCGAGCAGCGGAATATAATAATGTAAGGAG
CCAGCTTAGTGCAATCAACAGAAAGCAAAGTGGGAGCTTAGCGGTTCGTGATCTTTCCAA
TCTGGTAAAACCGGAGGATATGATCACCTCGGAACATCTTGTGACACTTCTTGCAATCGT
TCCCAAGTACTCCCAAAAAGACTGGCTGTCAAGCTATGAGACACTTGATACATTTGTGGT
ACCTAGGTCATCTAAAAAGCTCTATGAAGACAACGAATATGCTCTCTACACTGTGACACT
ATTTGCTAAGGTTGTTGACAACTTTAAGGTCCGTGCTCGCGAGAAGGGTTTTCAGATCCG
TGATTTCGAGTACAGTCCTGAAGCACAGGAAAGCCGGATGCAGGAGATGGAGAAGCTACT
GCGAGACCAAGAAGCTATGAGGACCACTCTTCTTCAGTGGTGTTATGCCAGCTACAGCGA
GGTATTCAGTTCCTGGATGCACTTTTGTGCTGTGCGTGTCTTTGTGGAGAGCATTCTTAG
ATATGGTCTGCCGCCATCATTCCTGTCTGCTGTTCTTGCACCATCTACAAAGAGCGAGAA
GAAAGTAAGGAGCATCTTAGACGAGCTCTCTGGCGATGCCCATAGCCTGTATTGGAAATC
CGAAGACGATGTAGGCGTTGCTGGTCTGGGAGGCGAAACCGAGGCGCACCCTTACGTCTC
CTTCACCATAAATTTTGTCTGAGACAAAGTATGGTTCCTAGACCGTCTGTGGCCTAGGCA
ATATAATACTTGGAAGCAGAACGAGCATGTATATTACTCTGTTGATTTATCGGTTCATGT
GGTCCTGTAGTTCATATCACAGAGAGATCAGCCGACGGATGCTGTAATTTCTGAGGAACC
TATGGAATTCCTGTAGT