Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039139_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:170961639:170963179:-1 gene:Zm00001d039139 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate-binding X8 domain superfamily protein
Sequence

ATGGCTCTGCCTCTGCGGCCAGTCCATGGCTTGGCGTCCCTTCTTCTTCTGCTCCTCGTC
CTCCTGTCCTGCAACTGCCACTGCCACGGGGGAGGAAGCGAGCGGGGAGCAGGCGCGACA
AAGAGGCTGGAGCGCGACGTCACGTCGCCCCTGGCCACGGTCCCGGTGGTGAACCCGACG
GCGACGATGCCGTTGCCCACCGCGACGCCGGCGGCGCCTTCGCTGCCGCTGGCCACCGGC
GCCGGCGGCGGGAGCTGGTGCGTGGCGAGCCCCAGCGCGGGCGCGGCGGTGCTGCAGGTG
GCGCTGAACTACGCGTGCGGCCAGGGCGGCGCGGACTGCTCCGCCGTCCAGCGGGGCGGG
AGCTGCTTCAGCCCGGACACCGTCCCCGACCACGCGTCCTACGCCTTCAACACCTACTAC
CAGAAGAACCCCGTGCAGACCAGCTGCGACTTCGGCGGCGCCGCAGTCCTCACCACCACC
AACCCGAGTACTTCGACGTGCCAGTATCCAGCAACGAGCACCGGAGCTTCGGTCCTGAAC
ACGTCGACTCCGCTGACGCCAGGATACGGATCTGCCCCCGGCGGGTACGGGAGCTCTCCA
CCGGCTGGAGACGGCAGGTCCCCTCCGCTGTACGGGAACATGTCGCCGCCGGACTACGGC
GACAACACCAGCGCCGCCGTGACCGTGAGGGCACTGCCCGGCCGCAAGACGGCGGCGGCC
GTCGTGGCGCTGGCCACGACGTCGACGTGGCTCCTCATCGCACTGACGGTGAGCGGCTGA

Peptide Sequence

PEP ID

Zm00001d039139_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:170961639:170963179:-1 gene:Zm00001d039139 transcript:Zm00001d039139_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate-binding X8 domain superfamily protein
Sequence

MALPLRPVHGLASLLLLLLVLLSCNCHCHGGGSERGAGATKRLERDVTSPLATVPVVNPT
ATMPLPTATPAAPSLPLATGAGGGSWCVASPSAGAAVLQVALNYACGQGGADCSAVQRGG
SCFSPDTVPDHASYAFNTYYQKNPVQTSCDFGGAAVLTTTNPSTSTCQYPATSTGASVLN
TSTPLTPGYGSAPGGYGSSPPAGDGRSPPLYGNMSPPDYGDNTSAAVTVRALPGRKTAAA
VVALATTSTWLLIALTVSG

Transcript Sequence

Transcript ID

Zm00001d039139_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:170961639:170963179:-1 gene:Zm00001d039139 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carbohydrate-binding X8 domain superfamily protein
Sequence

ATACAATGTGTGGACTCCTTTGATATCTCAATGTGTGCTGACCAGGCAGCCTGCCTGCCT
GCCTGCCCGGCCAAGTTTCCTGTTATTCCCCGGCGGCCAGACTTGTGATTCCGTTTGTTC
GTGTCACTGAAGAAAGCATTCGCTTTACACGCACTCGTTCCTGAATCAGCACAGCCCCAG
CCTACCGGTGCCGGCTGCTGCTTCGCTGGGAGCCAGAGGCCCACCCAGAGCTCGCAAGCT
TGTCATGGCTCTGCCTCTGCGGCCAGTCCATGGCTTGGCGTCCCTTCTTCTTCTGCTCCT
CGTCCTCCTGTCCTGCAACTGCCACTGCCACGGGGGAGGAAGCGAGCGGGGAGCAGGCGC
GACAAAGAGGCTGGAGCGCGACGTCACGTCGCCCCTGGCCACGGTCCCGGTGGTGAACCC
GACGGCGACGATGCCGTTGCCCACCGCGACGCCGGCGGCGCCTTCGCTGCCGCTGGCCAC
CGGCGCCGGCGGCGGGAGCTGGTGCGTGGCGAGCCCCAGCGCGGGCGCGGCGGTGCTGCA
GGTGGCGCTGAACTACGCGTGCGGCCAGGGCGGCGCGGACTGCTCCGCCGTCCAGCGGGG
CGGGAGCTGCTTCAGCCCGGACACCGTCCCCGACCACGCGTCCTACGCCTTCAACACCTA
CTACCAGAAGAACCCCGTGCAGACCAGCTGCGACTTCGGCGGCGCCGCAGTCCTCACCAC
CACCAACCCGAGTACTTCGACGTGCCAGTATCCAGCAACGAGCACCGGAGCTTCGGTCCT
GAACACGTCGACTCCGCTGACGCCAGGATACGGATCTGCCCCCGGCGGGTACGGGAGCTC
TCCACCGGCTGGAGACGGCAGGTCCCCTCCGCTGTACGGGAACATGTCGCCGCCGGACTA
CGGCGACAACACCAGCGCCGCCGTGACCGTGAGGGCACTGCCCGGCCGCAAGACGGCGGC
GGCCGTCGTGGCGCTGGCCACGACGTCGACGTGGCTCCTCATCGCACTGACGGTGAGCGG
CTGAACCTGCACGCCAGGCCCGCGCGCCGCGTTGCCTCCGCGCACGTGCAGTTCGTTCAG
TTGCAGACTCGCAGCTCAGGTGGCGCCCGAAGGTGATGTCTCTGTTAGAAAATATTTTAT
GTGATCTAATTCCAAGGGGTGCGACCCGTTGTGGTGTCCCTTCACTATGTATATATATGT
ACACTTCATGAGATGAATACAACAGTCCTGTCATTTTGT