Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039138_T016
CDS Infomation

cds chromosome:B73_RefGen_v4:6:170948892:170955404:1 gene:Zm00001d039138 gene_biotype:protein_coding transcript_biotype:protein_coding description:GBF-interacting protein 1
Sequence

ATGCAAGCTCCACTAAACTCATCAGCCTTGGATGTCAAGACAAGTGACACTACAGAAATA
TTTTCTGCTACTATCAATGTTGCCCAGACTGATGCTAAGAACACCACTTCTCAGCCTTTA
TCTAAAGTGCAGCATGGTTGGGGTGGTATTCCAGGTCGCCCTTCCATGGCTGAAATAGTG
AAGATGGGCAGGCCTCAAGCTAAAGTTGGGAGCAGATCTGTTGCAAGTAGCACTGCGTTG
CCAACCGTTGGTGATTCAGTCATTTCCAATACACCAAATCTTGTGCCTGAGGAATATAAC
AGAACTGTTTTTGCATCAGAAGCAGGCCATGTCGCAGCAGATAAATTGCCAAACGGTGCT
GTTGAGGTGCACTCTCTACCTAAAGATGCTTCCGCATTTGATATGTTACCTTCAGCTGAG
GGAACAGATGTTGAAGCCCCTTCCATGAGTGCTAATGCACAAGGGTCATCAACGCCAGAT
GCCAATGAAGATGACATTGAAAAATATGCAAATTTGGAAGAGGGCAATACAGAAAGCTTG
ATATCTCCTGGACAAGTTTCTGCTTCTGGTAAAGATATACAATCAGAATATACTGAAGTT
GTCAGCCATGTGGATGAAGGCTCGATAGAGAAAACAAATGACTTTCAGCTCAATGGCCTT
CCATTTGAGCACAACCAAAATCTGAATGGAGACGTGTCTACAGCGACAACACAATTTGAT
CATTTGACTCTGCATGAGGGACCAAAATTGTCCGATGATAATCCGGCTGTAATAATTCCT
GATCATCTTCAGGTTTCGAATGCTGATTGTGCGCATTTGACGTTTGGTAGTTTTGTGTCT
GGAACACTTGATTCATCCTTGACAACAAAACCTCTTGAAAGTCATGGGGATGCTGCGGCA
GTTCCTGATGATGATTCAATTGACCAATCAGATGGCAGGATCCATGACGATGAAGGCAAG
GTGACTTTAGCTACTGATGTTAATGAATATGTTACTTCTGCGGCAAACAGCAACGAGGAG
AATCTTGATATTACATCAGTACAGCAATCTGAAGTCACTAGAGCTGATTTCTTGGATGTC
ACAAGCAATACTGAATACAACCTAACATCAACTCCAGATTATGCAACTTCAAGTGCACCG
TTGCAAGATTCTGCTTCACAGAGTTTACAGGAAAACCGACAATTCCAGAACATCTCTCCT
TTCTCAAGCTTCATGCAAATGCAAAATGGTCTCCTGCCACCAGCAATTCCACCATTGCGT
GAATTTGATCCAGCATTTTCACTATTGCTCACCCATCCTCCTATGATGCATGGTACAATG
TCATCATCCATGAGCAATACAACTGTTTCTACGCAGCCCCAAGAGAATGCCAATCCAGTT
GGTTTACCCAACCCTCAATTGACTCAATCTCAGCAAAGCACCAGCATTGCTTCAGGGCCT
CCACTCCCTCAGCATCTTCTTCATCCCTATGCTCAACCAACCCTTCCTCTTGGCTACGCA
AGCATGATTGGCTATCCATCTCTTCCACCAAGCTATGCATATCTCCCGCCTGCCGCTTTT
CAGCAACCATACATGAACAGTGGCTTGTTCCACCAGGCAGCAGCGGCAGTTCCCACCTCA
AGTGTGAAATACCCTCTACCGCAGTACAAAAGCAACATTGCCCTTGCTAGCTTACCACAG
CCAGGCTCTTTGCTCTCAAGCTACGTTGGGGGCTTTGGAACTGCAAGCAACATGCCTGGA
AATTTCCCTCTGAATCAAAGCACAGCAGCAGCAACAACAACTCTTGGGTTTGATGGGACG
GTCCCTTCACATTTCAAAGATGGAAATCAATTTATTTCTCTTCAGCAGAATGAGAACCCT
GCAATGTGGATGCATGGTGCTAGTTCACGAGGGATGCCCCCACTTGCAGCCAGTACCATG
TATGGCTATCAAGGGCAGAGTCATCAGGCCGGCCTTCGGCAGGGCCAACTACCTTCACAA
TTTGGCTCTGCGCTTGGGCAGTCACAGCCAGGCCTGGGCCCTGAACACCGAAACCCTAGC
GATAGTAACCTAAGTGGCGCTGCTCAGGCTAACCAAATGTGGCCAAATACCTACTGA

Peptide Sequence

PEP ID

Zm00001d039138_P016
PEP Infomation

pep chromosome:B73_RefGen_v4:6:170948892:170955404:1 gene:Zm00001d039138 transcript:Zm00001d039138_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:GBF-interacting protein 1
Sequence

MQAPLNSSALDVKTSDTTEIFSATINVAQTDAKNTTSQPLSKVQHGWGGIPGRPSMAEIV
KMGRPQAKVGSRSVASSTALPTVGDSVISNTPNLVPEEYNRTVFASEAGHVAADKLPNGA
VEVHSLPKDASAFDMLPSAEGTDVEAPSMSANAQGSSTPDANEDDIEKYANLEEGNTESL
ISPGQVSASGKDIQSEYTEVVSHVDEGSIEKTNDFQLNGLPFEHNQNLNGDVSTATTQFD
HLTLHEGPKLSDDNPAVIIPDHLQVSNADCAHLTFGSFVSGTLDSSLTTKPLESHGDAAA
VPDDDSIDQSDGRIHDDEGKVTLATDVNEYVTSAANSNEENLDITSVQQSEVTRADFLDV
TSNTEYNLTSTPDYATSSAPLQDSASQSLQENRQFQNISPFSSFMQMQNGLLPPAIPPLR
EFDPAFSLLLTHPPMMHGTMSSSMSNTTVSTQPQENANPVGLPNPQLTQSQQSTSIASGP
PLPQHLLHPYAQPTLPLGYASMIGYPSLPPSYAYLPPAAFQQPYMNSGLFHQAAAAVPTS
SVKYPLPQYKSNIALASLPQPGSLLSSYVGGFGTASNMPGNFPLNQSTAAATTTLGFDGT
VPSHFKDGNQFISLQQNENPAMWMHGASSRGMPPLAASTMYGYQGQSHQAGLRQGQLPSQ
FGSALGQSQPGLGPEHRNPSDSNLSGAAQANQMWPNTY

Transcript Sequence

Transcript ID

Zm00001d039138_T016
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:170948892:170955404:1 gene:Zm00001d039138 gene_biotype:protein_coding transcript_biotype:protein_coding description:GBF-interacting protein 1
Sequence

GTAGACTAAAGTTAATCACGAAACAAGGCCTCGACCTTTCCAGAAATATACATACCGAGG
ATATAAGGCTGTTTCAGATCGAAGTGGGCGAGACCCTACAGGCGGTTTCAAAGGCCCTGT
AAAAAAGGAACCAGAGATGCAAGCTCCACTAAACTCATCAGCCTTGGATGTCAAGACAAG
TGACACTACAGAAATATTTTCTGCTACTATCAATGTTGCCCAGACTGATGCTAAGAACAC
CACTTCTCAGCCTTTATCTAAAGTGCAGCATGGTTGGGGTGGTATTCCAGGTCGCCCTTC
CATGGCTGAAATAGTGAAGATGGGCAGGCCTCAAGCTAAAGTTGGGAGCAGATCTGTTGC
AAGTAGCACTGCGTTGCCAACCGTTGGTGATTCAGTCATTTCCAATACACCAAATCTTGT
GCCTGAGGAATATAACAGAACTGTTTTTGCATCAGAAGCAGGCCATGTCGCAGCAGATAA
ATTGCCAAACGGTGCTGTTGAGGTGCACTCTCTACCTAAAGATGCTTCCGCATTTGATAT
GTTACCTTCAGCTGAGGGAACAGATGTTGAAGCCCCTTCCATGAGTGCTAATGCACAAGG
GTCATCAACGCCAGATGCCAATGAAGATGACATTGAAAAATATGCAAATTTGGAAGAGGG
CAATACAGAAAGCTTGATATCTCCTGGACAAGTTTCTGCTTCTGGTAAAGATATACAATC
AGAATATACTGAAGTTGTCAGCCATGTGGATGAAGGCTCGATAGAGAAAACAAATGACTT
TCAGCTCAATGGCCTTCCATTTGAGCACAACCAAAATCTGAATGGAGACGTGTCTACAGC
GACAACACAATTTGATCATTTGACTCTGCATGAGGGACCAAAATTGTCCGATGATAATCC
GGCTGTAATAATTCCTGATCATCTTCAGGTTTCGAATGCTGATTGTGCGCATTTGACGTT
TGGTAGTTTTGTGTCTGGAACACTTGATTCATCCTTGACAACAAAACCTCTTGAAAGTCA
TGGGGATGCTGCGGCAGTTCCTGATGATGATTCAATTGACCAATCAGATGGCAGGATCCA
TGACGATGAAGGCAAGGTGACTTTAGCTACTGATGTTAATGAATATGTTACTTCTGCGGC
AAACAGCAACGAGGAGAATCTTGATATTACATCAGTACAGCAATCTGAAGTCACTAGAGC
TGATTTCTTGGATGTCACAAGCAATACTGAATACAACCTAACATCAACTCCAGATTATGC
AACTTCAAGTGCACCGTTGCAAGATTCTGCTTCACAGAGTTTACAGGAAAACCGACAATT
CCAGAACATCTCTCCTTTCTCAAGCTTCATGCAAATGCAAAATGGTCTCCTGCCACCAGC
AATTCCACCATTGCGTGAATTTGATCCAGCATTTTCACTATTGCTCACCCATCCTCCTAT
GATGCATGGTACAATGTCATCATCCATGAGCAATACAACTGTTTCTACGCAGCCCCAAGA
GAATGCCAATCCAGTTGGTTTACCCAACCCTCAATTGACTCAATCTCAGCAAAGCACCAG
CATTGCTTCAGGGCCTCCACTCCCTCAGCATCTTCTTCATCCCTATGCTCAACCAACCCT
TCCTCTTGGCTACGCAAGCATGATTGGCTATCCATCTCTTCCACCAAGCTATGCATATCT
CCCGCCTGCCGCTTTTCAGCAACCATACATGAACAGTGGCTTGTTCCACCAGGCAGCAGC
GGCAGTTCCCACCTCAAGTGTGAAATACCCTCTACCGCAGTACAAAAGCAACATTGCCCT
TGCTAGCTTACCACAGCCAGGCTCTTTGCTCTCAAGCTACGTTGGGGGCTTTGGAACTGC
AAGCAACATGCCTGGAAATTTCCCTCTGAATCAAAGCACAGCAGCAGCAACAACAACTCT
TGGGTTTGATGGGACGGTCCCTTCACATTTCAAAGATGGAAATCAATTTATTTCTCTTCA
GCAGAATGAGAACCCTGCAATGTGGATGCATGGTGCTAGTTCACGAGGGATGCCCCCACT
TGCAGCCAGTACCATGTATGGCTATCAAGGGCAGAGTCATCAGGCCGGCCTTCGGCAGGG
CCAACTACCTTCACAATTTGGCTCTGCGCTTGGGCAGTCACAGCCAGGCCTGGGCCCTGA
ACACCGAAACCCTAGCGATAGTAACCTAAGTGGCGCTGCTCAGGCTAACCAAATGTGGCC
AAATACCTACTGATCCATCCCCCTTGTCGACTTCTGTGGAAGGCGGTCCTGTTGTGTGTG
CAACGCCGGTGAGGCCATGCAGTGCTTGTGTTCTGATCCAGGCACGCGGATACCAGCTGT
GCCTGTGCGCATGAGTCGCTGTCGTGACATTTTGAGGCACAAGAGACATATGTTCGAGCA
TGCTCTACCTGTAGGGTTTCTAGGATATGGCAAAAGAAAATGTAGCTCGATCTATTTATT
CAAATTCTGATAGAGAAAGGACTTCCTCTTTTCTATT