Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039120_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:6:170406870:170411567:1 gene:Zm00001d039120 gene_biotype:protein_coding transcript_biotype:protein_coding description:auxin-like 1 protein
Sequence	ATGTCATATAACAAGACTGCTGAGAGGAGACCTGATGATCTAATTGAGATGATGACCTGC ACAGTTAAACCTTCGGTGGACTTTGTGATTGATTCTCGCAATTCATTACATGGTCCAGCA ACCAATCATGTTTCAAGAATTGATTATGGAACAATGGCCAATGATGATAGTAATAAGAAA CCAAGCCCTGCTAACACGAGTGTGCAGAGTGCTGAGAGTGATTTTGCAGTTGATCAGAAG CAGCAAAGTCAATCATGGACACCTATTTCTGGAAGTATATCTGCAAACGAAAATCACAAG AACTCTGATAGTCATTCAACACGTAGTACTGTAACGCCTCCTGATTATGCATTTCTTCAG GTATCTGACAGTGATACACAGACACAATCAATCAAAGTACAACAACCATTGAAGCAACAA CCTAAACTGCTCAACAAGAAAGAGAGTGCAGCTAAAGAAGACGTCAGGATTGTAGACGAC AATTGCTCTCCAACTTCTGCACATATCACTTCAAGTAGCAACATGTCTCACACTGACAAG AAAGTTGATGCCAATCCAACTTCTGCATCAGCAGCTATGAAGGAGGCAATGAATTTTGCT GAAGCTAGGTTAAAGGCTGCAAAAGCATTGTTAGAGGGAAAAGGTGACAGTTTTAAATTG CGGAAGAAGCCAAGTCATCTTAAAAGCACAAGGTCTACAGAAATCAAGTCTCCTATTTCT GTAGAGGCCGATACTTCTGAACAAAAACTATGGGTGAAAAAGTCATCGGAAGAAGAAAAG AACCCTGACGATTCTTTGTCTGACAAGCACAAAAAGCTGACTGCAGTCAGATTAGATCAT TTTGATGACAATGGAAAAAAGGTACTTCCATTGGAGAAGCCTGAGCATATGGTGCAACAC TGCACTGAATCCTGTCAAACTTCCAGTAAACTACAAAAACTAGGCAACTGGAAGTCAGGT AATGACTTTTTTGAGCTAACCCGAGATGATCAGAAATGCAAAAATGATGAAGCCACAGAG GGAGGTGATAAATGTGAGCAAATGAATCCTATTACTAGTGTCATCAATGATCACAATGAA ATTGAATTCAATGCAGCAGGCTCTGACTTGGACAGGTATGAAAAACTATGGGAGGTTAAT GATGGCAGGAGTGTGGGGGTGAAACCTGTAAATCTGAGAGAGAACAAGACAGCTCCCGTG GACAAAGATAGTGTGTCTGTGATTTTAGAATCTTCTACAGAAAATAAGGCACACCAAAAG ACTCACAACTCAATTGGTGAGGGACTTGTAACACTGAAAAATGCTAAGGAAAGCCATGGT ACTGATAAGTGCTTTGAGCTTCCTTCTATGAGTGGAGCCTCCACAAAGCTGGATGTCTTC AAGGATGTGTCAGGTTCATTTCCGGAGGCTCGCTCATCAGTAAATGCCAGCGATCTTGGA GACCATGGTAATATTAGTCCAAACTTAAGTCCATTAGCAGGAACATCACAAGAGGACACA ACCAGTAAACTGGTATCAGAAGTATCTTGCGATGGTGGGATGCAACACACTTCTCGTAGT AATGAAAAGCTACAGGAATCCTCAGATGTATCTGATGTTGCTATTTCCCAGGGAAGTAAC ATTAAATCATTCATTTTAGAAGAACTTAAAGAATCTGATGTATGTGATGCTTTCATGAGG GGACCTAATGGAAAAGGGCAGGAAGCTGAAAATTATGGAAGAGAAAAATTCAGCTTTATT GATGGATCACTCTTGCTGCGACCACACTTCCATAACAAAGGTGCTAAGATGAATGTAATC TCTGAGGAAGTACAGAAAGTCAAAAATGAGGAGAAACTTGGTCCGTGTACACACCCCGAA GTAACAATTGTGGATCTGGATGGTGATTGTCCTAAAGATTTGAATGATGTTATTCTACAA AATGATGACTTTGCAGACCCAGAAGAATCAAACATGCCTAATGTATTTGAGGTAGCTAGC AAGTTGATTAAAAGAGATCTGGATCAAGAAATGCATGGGTCATTAGGACATGGTGAAGAG GAGAATATGGAAGAAGGAACAGATGTACATCTTTGTGATATTAATGGCAAAGAAGTAGAT GAAACCTTGTTAGAAAATAGTGTGTGTACAGATACTGAAGAAGGATGTGCTCATTGTAAC CAGGAAGACCAGAATTCATCTGACAGCACCAACAGAGGAAAAAGTGATGTAGATAACATG TGTTATACATCTTGTGACGAGGTTAGGTCTGAATCATTTTCAGGCGATGAAGTTGTTATC AAAACTACAATTGATAGCACTGCCAGAACATTTGTTAATTTGAAAGATGAGCAGGTTTTG TCTTCAGAAATGTATACCCGCATGCAGCACTCAATGCAAAAAGATGGTACTGCTGCTTTT CAGACATCTGGGGGTGTTCCTGGTCTTGAAGAAATCGGGGATGTTTCCAACAGAGGAGGA AGAGAATTATCAACAGAAAGGTCTACATGTGAAGATCATGGCAACGCAATCATAATGGAA GAAAAAGACACTACAACAAGGATATCAAAGGCAGAGCATGCATCATCTCCCTTGGAGACG ATGTGTGGTGTAACTAAATCTGCTGAAGCTCCCACAACAGTTCCTACTGTGACACGGAAA AAAGAGGTACATGGAGTTCAGAGGACCAAAGAGAGGGAGAACATGACAACAGCAGATAGT GCATGTGAAAAGGACAAAGGGTCTTCTCAAAGAGTACAGGAGGAAAACGAAAGTGAAAGG AGATTGGAGAAAGAAAGAGAAGTTGAAGAGAAGGAAAGAAGGAAATTGGAGAAAGAAAGA GAACTTGCCGAAGAGAAGGAAAGAAGGAAATTTGAGAAAGAAAGAGAACTTGCCGAAGAG

Peptide Sequence

PEP ID	Zm00001d039120_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:6:170406870:170411567:1 gene:Zm00001d039120 transcript:Zm00001d039120_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:auxin-like 1 protein
Sequence	MSYNKTAERRPDDLIEMMTCTVKPSVDFVIDSRNSLHGPATNHVSRIDYGTMANDDSNKK PSPANTSVQSAESDFAVDQKQQSQSWTPISGSISANENHKNSDSHSTRSTVTPPDYAFLQ VSDSDTQTQSIKVQQPLKQQPKLLNKKESAAKEDVRIVDDNCSPTSAHITSSSNMSHTDK KVDANPTSASAAMKEAMNFAEARLKAAKALLEGKGDSFKLRKKPSHLKSTRSTEIKSPIS VEADTSEQKLWVKKSSEEEKNPDDSLSDKHKKLTAVRLDHFDDNGKKVLPLEKPEHMVQH CTESCQTSSKLQKLGNWKSGNDFFELTRDDQKCKNDEATEGGDKCEQMNPITSVINDHNE IEFNAAGSDLDRYEKLWEVNDGRSVGVKPVNLRENKTAPVDKDSVSVILESSTENKAHQK THNSIGEGLVTLKNAKESHGTDKCFELPSMSGASTKLDVFKDVSGSFPEARSSVNASDLG DHGNISPNLSPLAGTSQEDTTSKLVSEVSCDGGMQHTSRSNEKLQESSDVSDVAISQGSN IKSFILEELKESDVCDAFMRGPNGKGQEAENYGREKFSFIDGSLLLRPHFHNKGAKMNVI SEEVQKVKNEEKLGPCTHPEVTIVDLDGDCPKDLNDVILQNDDFADPEESNMPNVFEVAS KLIKRDLDQEMHGSLGHGEEENMEEGTDVHLCDINGKEVDETLLENSVCTDTEEGCAHCN QEDQNSSDSTNRGKSDVDNMCYTSCDEVRSESFSGDEVVIKTTIDSTARTFVNLKDEQVL SSEMYTRMQHSMQKDGTAAFQTSGGVPGLEEIGDVSNRGGRELSTERSTCEDHGNAIIME EKDTTTRISKAEHASSPLETMCGVTKSAEAPTTVPTVTRKKEVHGVQRTKERENMTTADS ACEKDKGSSQRVQEENESERRLEKEREVEEKERRKLEKERELAEEKERRKFEKERELAEE

Transcript Sequence

Transcript ID	Zm00001d039120_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:170406870:170411567:1 gene:Zm00001d039120 gene_biotype:protein_coding transcript_biotype:protein_coding description:auxin-like 1 protein
Sequence	AGGTGTCTCCCTTCTTTGAGAGAGAAAAGCAGAGCCTTTTCTACTCACTCATTATTCGGC TCAGCGTGAAATGGTGTCACCAGGTGGTGCTGGTATTGCCATTTGCCCCCTCCCCCCCTT TGTGCTTCTATGGCATTTGAGGGTCTCTACTAAGGATTCGCTGTTTGCGGGCTTTTGTTT ATTTTTTCATGTGAATATATATTGTTCGAATTAAGATTTATGTGTAATGTTGTAATCACA TCGTGGAGATCCTCATACGGCGGACATTACAACCACTGTCTATTTCCATGGATTTAAAAA AGTTGAGCATTGAAGAAGAGTTGGATGACTTGATAACAAGTATTCAACATTTGCCGTGGA CGAAATTCATAGGATTGATCATCGTTTAGAAAAGAATCCAGCCAGCTGGAGGATGAGCCT TCTATACTTCCTCAACACTATCAAAATCTGGATCATCATCAGCATTTTAAAGACCATAAG TTTTCTCCAATATCCTTCTCTACAGACACAGAAAGTCCGCAGTTTGTGATGTCATATAAC AAGACTGCTGAGAGGAGACCTGATGATCTAATTGAGATGATGACCTGCACAGTTAAACCT TCGGTGGACTTTGTGATTGATTCTCGCAATTCATTACATGGTCCAGCAACCAATCATGTT TCAAGAATTGATTATGGAACAATGGCCAATGATGATAGTAATAAGAAACCAAGCCCTGCT AACACGAGTGTGCAGAGTGCTGAGAGTGATTTTGCAGTTGATCAGAAGCAGCAAAGTCAA TCATGGACACCTATTTCTGGAAGTATATCTGCAAACGAAAATCACAAGAACTCTGATAGT CATTCAACACGTAGTACTGTAACGCCTCCTGATTATGCATTTCTTCAGGTATCTGACAGT GATACACAGACACAATCAATCAAAGTACAACAACCATTGAAGCAACAACCTAAACTGCTC AACAAGAAAGAGAGTGCAGCTAAAGAAGACGTCAGGATTGTAGACGACAATTGCTCTCCA ACTTCTGCACATATCACTTCAAGTAGCAACATGTCTCACACTGACAAGAAAGTTGATGCC AATCCAACTTCTGCATCAGCAGCTATGAAGGAGGCAATGAATTTTGCTGAAGCTAGGTTA AAGGCTGCAAAAGCATTGTTAGAGGGAAAAGGTGACAGTTTTAAATTGCGGAAGAAGCCA AGTCATCTTAAAAGCACAAGGTCTACAGAAATCAAGTCTCCTATTTCTGTAGAGGCCGAT ACTTCTGAACAAAAACTATGGGTGAAAAAGTCATCGGAAGAAGAAAAGAACCCTGACGAT TCTTTGTCTGACAAGCACAAAAAGCTGACTGCAGTCAGATTAGATCATTTTGATGACAAT GGAAAAAAGGTACTTCCATTGGAGAAGCCTGAGCATATGGTGCAACACTGCACTGAATCC TGTCAAACTTCCAGTAAACTACAAAAACTAGGCAACTGGAAGTCAGGTAATGACTTTTTT GAGCTAACCCGAGATGATCAGAAATGCAAAAATGATGAAGCCACAGAGGGAGGTGATAAA TGTGAGCAAATGAATCCTATTACTAGTGTCATCAATGATCACAATGAAATTGAATTCAAT GCAGCAGGCTCTGACTTGGACAGGTATGAAAAACTATGGGAGGTTAATGATGGCAGGAGT GTGGGGGTGAAACCTGTAAATCTGAGAGAGAACAAGACAGCTCCCGTGGACAAAGATAGT GTGTCTGTGATTTTAGAATCTTCTACAGAAAATAAGGCACACCAAAAGACTCACAACTCA ATTGGTGAGGGACTTGTAACACTGAAAAATGCTAAGGAAAGCCATGGTACTGATAAGTGC TTTGAGCTTCCTTCTATGAGTGGAGCCTCCACAAAGCTGGATGTCTTCAAGGATGTGTCA GGTTCATTTCCGGAGGCTCGCTCATCAGTAAATGCCAGCGATCTTGGAGACCATGGTAAT ATTAGTCCAAACTTAAGTCCATTAGCAGGAACATCACAAGAGGACACAACCAGTAAACTG GTATCAGAAGTATCTTGCGATGGTGGGATGCAACACACTTCTCGTAGTAATGAAAAGCTA CAGGAATCCTCAGATGTATCTGATGTTGCTATTTCCCAGGGAAGTAACATTAAATCATTC ATTTTAGAAGAACTTAAAGAATCTGATGTATGTGATGCTTTCATGAGGGGACCTAATGGA AAAGGGCAGGAAGCTGAAAATTATGGAAGAGAAAAATTCAGCTTTATTGATGGATCACTC TTGCTGCGACCACACTTCCATAACAAAGGTGCTAAGATGAATGTAATCTCTGAGGAAGTA CAGAAAGTCAAAAATGAGGAGAAACTTGGTCCGTGTACACACCCCGAAGTAACAATTGTG GATCTGGATGGTGATTGTCCTAAAGATTTGAATGATGTTATTCTACAAAATGATGACTTT GCAGACCCAGAAGAATCAAACATGCCTAATGTATTTGAGGTAGCTAGCAAGTTGATTAAA AGAGATCTGGATCAAGAAATGCATGGGTCATTAGGACATGGTGAAGAGGAGAATATGGAA GAAGGAACAGATGTACATCTTTGTGATATTAATGGCAAAGAAGTAGATGAAACCTTGTTA GAAAATAGTGTGTGTACAGATACTGAAGAAGGATGTGCTCATTGTAACCAGGAAGACCAG AATTCATCTGACAGCACCAACAGAGGAAAAAGTGATGTAGATAACATGTGTTATACATCT TGTGACGAGGTTAGGTCTGAATCATTTTCAGGCGATGAAGTTGTTATCAAAACTACAATT GATAGCACTGCCAGAACATTTGTTAATTTGAAAGATGAGCAGGTTTTGTCTTCAGAAATG TATACCCGCATGCAGCACTCAATGCAAAAAGATGGTACTGCTGCTTTTCAGACATCTGGG GGTGTTCCTGGTCTTGAAGAAATCGGGGATGTTTCCAACAGAGGAGGAAGAGAATTATCA ACAGAAAGGTCTACATGTGAAGATCATGGCAACGCAATCATAATGGAAGAAAAAGACACT ACAACAAGGATATCAAAGGCAGAGCATGCATCATCTCCCTTGGAGACGATGTGTGGTGTA ACTAAATCTGCTGAAGCTCCCACAACAGTTCCTACTGTGACACGGAAAAAAGAGGTACAT GGAGTTCAGAGGACCAAAGAGAGGGAGAACATGACAACAGCAGATAGTGCATGTGAAAAG GACAAAGGGTCTTCTCAAAGAGTACAGGAGGAAAACGAAAGTGAAAGGAGATTGGAGAAA GAAAGAGAAGTTGAAGAGAAGGAAAGAAGGAAATTGGAGAAAGAAAGAGAACTTGCCGAA GAGAAGGAAAGAAGGAAATTTGAGAAAGAAAGAGAACTTGCCGAAGAG