Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039115_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:170339523:170340530:1 gene:Zm00001d039115 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA glycosylase superfamily protein
Sequence

ATGGGCGAGCAATCCCTCTCCCAGCCCAAGCCCCAGCCTCTCTCCCCGTTCCCGTCGCCT
CCCGCCTCCGCCGCGTTGCCGCCCCCCGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCT
GCCTCCACCTCCCGCACCACCAGCGCCGCGGCCTCGCGCCCCAAGAAGAAGGTGACGAAC
CCATCGCCCGACCGTAACCCGGCAAAGAAGCCCCGCCTGACGTTCTCGATCCCGGGCCGG
CCCCTGTCCGCAGTCGGCGAGGTGGGCGTGGCCATCCGCTACCTGCGCGCCGCGGACCCC
GCCCTCGCCGCCGTCATCGACGCGCACGAGCCCCCCGTGTTCCAGTGCCCGCACCGCCCG
TTCCACTCCCTCGTCCGATCCATCCTGTACCAGCAGCTCGCCTTCAAGGCCGCCGCCTCC
GTCTACTCCCGCTTCCTCGCGCTTCTCGGCGGCGAGTCCTGCGTGGCCCCCGATGCCGTC
CTCGCGCTCACCCCGCACCAGCTCCGCCAGATCGGGGTCTCCCCGCGCAAGGCTTCCTAC
CTCCACGACCTCGCCCGCAAGTATGCCTCCGGGATCCTCTCCGACGCCGCCATCGTCAAC
ATGGACGACCGCTCCCTCGCCGCCATGCTCACCATGGTCAAGGGCATCGGCTCCTGGAGC
GTCCACATGTTCATGATCTTCTCTCTCGCGCGCCCCGACGTGCTCCCCTCCGCCGACCTC
GGCGTGCGCAAGGGCGTGCAGATGCTCTACGCCCTCGAGGACGTGCCTCGTCCGTCGCAG
ATGGACAAGCTGTGCGAGCGGTGGCGCCCCTATCGCTCAGTTGGGGCTTGGTACATGTGG
CGGCTCATTGAATCCAAGGTGCCCCAGCCGGCGCCAGCCATCCCTGTTGGATCACTTGCT
TTCCCTTCGCCGGACGGCCAGAGTATGCTACAGCAGCAAGAACAACAGCAACAGCAGACT
GTCATCCAAATGATCGACCCCCTTCAGATGCTCCCAGGGATGGGGTGA

Peptide Sequence

PEP ID

Zm00001d039115_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:170339523:170340530:1 gene:Zm00001d039115 transcript:Zm00001d039115_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA glycosylase superfamily protein
Sequence

MGEQSLSQPKPQPLSPFPSPPASAALPPPASASASASASAASTSRTTSAAASRPKKKVTN
PSPDRNPAKKPRLTFSIPGRPLSAVGEVGVAIRYLRAADPALAAVIDAHEPPVFQCPHRP
FHSLVRSILYQQLAFKAAASVYSRFLALLGGESCVAPDAVLALTPHQLRQIGVSPRKASY
LHDLARKYASGILSDAAIVNMDDRSLAAMLTMVKGIGSWSVHMFMIFSLARPDVLPSADL
GVRKGVQMLYALEDVPRPSQMDKLCERWRPYRSVGAWYMWRLIESKVPQPAPAIPVGSLA
FPSPDGQSMLQQQEQQQQQTVIQMIDPLQMLPGMG

Transcript Sequence

Transcript ID

Zm00001d039115_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:170339523:170340530:1 gene:Zm00001d039115 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA glycosylase superfamily protein
Sequence

ATGGGCGAGCAATCCCTCTCCCAGCCCAAGCCCCAGCCTCTCTCCCCGTTCCCGTCGCCT
CCCGCCTCCGCCGCGTTGCCGCCCCCCGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCT
GCCTCCACCTCCCGCACCACCAGCGCCGCGGCCTCGCGCCCCAAGAAGAAGGTGACGAAC
CCATCGCCCGACCGTAACCCGGCAAAGAAGCCCCGCCTGACGTTCTCGATCCCGGGCCGG
CCCCTGTCCGCAGTCGGCGAGGTGGGCGTGGCCATCCGCTACCTGCGCGCCGCGGACCCC
GCCCTCGCCGCCGTCATCGACGCGCACGAGCCCCCCGTGTTCCAGTGCCCGCACCGCCCG
TTCCACTCCCTCGTCCGATCCATCCTGTACCAGCAGCTCGCCTTCAAGGCCGCCGCCTCC
GTCTACTCCCGCTTCCTCGCGCTTCTCGGCGGCGAGTCCTGCGTGGCCCCCGATGCCGTC
CTCGCGCTCACCCCGCACCAGCTCCGCCAGATCGGGGTCTCCCCGCGCAAGGCTTCCTAC
CTCCACGACCTCGCCCGCAAGTATGCCTCCGGGATCCTCTCCGACGCCGCCATCGTCAAC
ATGGACGACCGCTCCCTCGCCGCCATGCTCACCATGGTCAAGGGCATCGGCTCCTGGAGC
GTCCACATGTTCATGATCTTCTCTCTCGCGCGCCCCGACGTGCTCCCCTCCGCCGACCTC
GGCGTGCGCAAGGGCGTGCAGATGCTCTACGCCCTCGAGGACGTGCCTCGTCCGTCGCAG
ATGGACAAGCTGTGCGAGCGGTGGCGCCCCTATCGCTCAGTTGGGGCTTGGTACATGTGG
CGGCTCATTGAATCCAAGGTGCCCCAGCCGGCGCCAGCCATCCCTGTTGGATCACTTGCT
TTCCCTTCGCCGGACGGCCAGAGTATGCTACAGCAGCAAGAACAACAGCAACAGCAGACT
GTCATCCAAATGATCGACCCCCTTCAGATGCTCCCAGGGATGGGGTGA