Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039102_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:170102019:170103743:-1 gene:Zm00001d039102 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable 2-oxoglutarate-dependent dioxygenase AOP1
Sequence	ATGGGCGGCGAGGCGAAGAAGCTCCCCAGGATCGACTTCTCCGAGGTGGACCCGTCTGCG CCGGGCGGCCAGGCATGGGGCACGGCGCGCGGCGAGGTGATGGACGCGCTGGCCACCTTC GGCTGCTTCGAGGCGCACTACCCGGCTCTGGCCCCTAGGCTCCGGGCCGAGCTCTTCGAA GGCGCCGTAAGGCCGCTCTTCGCGCTGTCCGCCGACGCCAAGCGCCGCAACTGCTACGGC GCCGATAGGCCGTTCCACGGCTACCTTGGCGACGTCCCGGGGTTCCCTGGCTACGAGAGC CTCGCCATCGTGGACGGCACCAAGGACGAGTCCGTCCGCGGCTTCGCCCGCCTCATGTGG CCCGACGGCGGCGACAACAGCGACAGTTTCTGCGGTACTGTCGTTGAGGCGGCGCAGCGG ATCTTCCAGCTGGAGGAGGCCGTGCGGCGGATGGTGATGGAAGGGCTCGGGGTGGCCAAG CACCACGACGCGCTGAGCGCGTCCATGTGGCACCTGTTCCGGATGTCGGAGTACAAGGCG CCCAACGCCGCGGAGAAGGTGGTCAGGTACGGGGCGCATCAGGACACCAACTGGCTCAGC GTCGTCTGCCAGCACGAGGTGGCCGGGCTGGAGATGCAGAGCAGGGGTGGCGAGTGGATC GTCGTCCAGCCGTCGCCCACGTCGCTGGTTTTCATGGTCGGCAACGAGCTCCGGGCATGG ACGAACGACCGTCTATATGCTCCATTCCACCGGATCACCGTCGCTGGGGACGTCCCCAGA TACTCCGCGATGCTGTTCTCGGTCCCCAGCTTCCAGGTTCAGGTGGCAGACGAGCTCGTG GACGACGAACACCCTCCCCGTTTCAAGCCCCATGACAACAACGACTTCGTCTGCTTCTGC GTTTCCGAAGAAGGCGCTCTCCATCAAGATAAACTCAAGGCCTTCTGTGGAGTGTAA

Peptide Sequence

PEP ID	Zm00001d039102_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:170102019:170103743:-1 gene:Zm00001d039102 transcript:Zm00001d039102_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable 2-oxoglutarate-dependent dioxygenase AOP1
Sequence	MGGEAKKLPRIDFSEVDPSAPGGQAWGTARGEVMDALATFGCFEAHYPALAPRLRAELFE GAVRPLFALSADAKRRNCYGADRPFHGYLGDVPGFPGYESLAIVDGTKDESVRGFARLMW PDGGDNSDSFCGTVVEAAQRIFQLEEAVRRMVMEGLGVAKHHDALSASMWHLFRMSEYKA PNAAEKVVRYGAHQDTNWLSVVCQHEVAGLEMQSRGGEWIVVQPSPTSLVFMVGNELRAW TNDRLYAPFHRITVAGDVPRYSAMLFSVPSFQVQVADELVDDEHPPRFKPHDNNDFVCFC VSEEGALHQDKLKAFCGV

Transcript Sequence

Transcript ID	Zm00001d039102_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:170102019:170103743:-1 gene:Zm00001d039102 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable 2-oxoglutarate-dependent dioxygenase AOP1
Sequence	GCGGGTCAGCAAACCAAAAGCAGAGCACGCAGCCCAGCTTCACGAGATTCCGTGACTGCG ACGGCGAGGATGGGCGGCGAGGCGAAGAAGCTCCCCAGGATCGACTTCTCCGAGGTGGAC CCGTCTGCGCCGGGCGGCCAGGCATGGGGCACGGCGCGCGGCGAGGTGATGGACGCGCTG GCCACCTTCGGCTGCTTCGAGGCGCACTACCCGGCTCTGGCCCCTAGGCTCCGGGCCGAG CTCTTCGAAGGCGCCGTAAGGCCGCTCTTCGCGCTGTCCGCCGACGCCAAGCGCCGCAAC TGCTACGGCGCCGATAGGCCGTTCCACGGCTACCTTGGCGACGTCCCGGGGTTCCCTGGC TACGAGAGCCTCGCCATCGTGGACGGCACCAAGGACGAGTCCGTCCGCGGCTTCGCCCGC CTCATGTGGCCCGACGGCGGCGACAACAGCGACAGTTTCTGCGGTACTGTCGTTGAGGCG GCGCAGCGGATCTTCCAGCTGGAGGAGGCCGTGCGGCGGATGGTGATGGAAGGGCTCGGG GTGGCCAAGCACCACGACGCGCTGAGCGCGTCCATGTGGCACCTGTTCCGGATGTCGGAG TACAAGGCGCCCAACGCCGCGGAGAAGGTGGTCAGGTACGGGGCGCATCAGGACACCAAC TGGCTCAGCGTCGTCTGCCAGCACGAGGTGGCCGGGCTGGAGATGCAGAGCAGGGGTGGC GAGTGGATCGTCGTCCAGCCGTCGCCCACGTCGCTGGTTTTCATGGTCGGCAACGAGCTC CGGGCATGGACGAACGACCGTCTATATGCTCCATTCCACCGGATCACCGTCGCTGGGGAC GTCCCCAGATACTCCGCGATGCTGTTCTCGGTCCCCAGCTTCCAGGTTCAGGTGGCAGAC GAGCTCGTGGACGACGAACACCCTCCCCGTTTCAAGCCCCATGACAACAACGACTTCGTC TGCTTCTGCGTTTCCGAAGAAGGCGCTCTCCATCAAGATAAACTCAAGGCCTTCTGTGGA GTGTAACGAGCAGCAGAACATATCAGCCGTCCGGCATCTGTGTTATTATACTTTTACCTC AGCCTTGCATGCAGCAGAGGCCAGGCCACCCCTGTAGACTAGTACGTACAATTTTTAGAA CACGCGTGAGATGATAACTCGTCTGCATTTCTTATATTCTGAACATGAACAACAAAGCAT TCTGGTAGCCATGAAAAGAGCACGCGTGAGAAGATAACTCAGCTCCTTGCACTTGCTTTC AACTAGTTTCGACTGGTTGTAACTACTGCTTCCTACCGATTTTCGCTGCT