Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039089_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:169782827:169787367:-1 gene:Zm00001d039089 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malate dehydrogenase2 description:Malate dehydrogenase

Sequence

ATGAGGCCGGCGCTGCTCAAGTCCACGGCGGAGGTTTTCAAGAAGGCTGGTACTTATGAT
GAGAAGAAGCTGTTTGGTGTGACTACTCTTGATGTTGTTCGTGCTAAAACTTTTTATGCT
GGAAAAGCGGGTGTGCCAGTTACTGGGGTGAATGTTCCTGTTGTCGGAGGCCATGCGGGT
ATTACTATTCTGCCACTCTTCTCGCAGGCCACTCCTGCAAGCAATTCATTGTCCCAAGAA
GACATTGAGGCCCTCACCAAGAGGACACAAGATGGTGGGACAGAGGTGGTTGAAGCAAAG
GCGGGAAAAGGCTCTGCAACGTTGTCCATGGCATATGCTGGTGCTGTTTTTGCAGATGCA
TGTTTGAAGGGTCTGAATGGAGTTCCAGACATTGTAGAGTGCTCTTTTGTGCAATCAACT
GTGACAGAGTTGCCATTCTTTGCCTCCAAGGTTCGGCTCGGCAAGAATGGAGTGGAGGAA
GTGCTTGGTCTGGGTGAGCTCAACGAGTTCGAGAAGAAGGGGCTGGAAAACCTCAAGGGC
GAGCTCAAGTCTTCCATCGACAAGGGTATCAAGTTTGCCCACGGGAACTAG

Peptide Sequence

PEP ID

Zm00001d039089_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:169782827:169787367:-1 gene:Zm00001d039089 transcript:Zm00001d039089_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malate dehydrogenase2 description:Malate dehydrogenase

Sequence

MRPALLKSTAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKAGVPVTGVNVPVVGGHAG
ITILPLFSQATPASNSLSQEDIEALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADA
CLKGLNGVPDIVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGELNEFEKKGLENLKG
ELKSSIDKGIKFAHGN

Transcript Sequence

Transcript ID

Zm00001d039089_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:169782827:169787367:-1 gene:Zm00001d039089 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:malate dehydrogenase2 description:Malate dehydrogenase

Sequence

GGGCGGAGACGTCGAGACAACACGCCAGCCCCTCACCTTTTTTCTCTCTCAACCCGCCAG
CGCCACCAGCAACTTCCCTCAGATCCCATCCACCCCTCGCTATTAAAGCAGCCCAGGCCG
CCGCCCGCCGCCGCTCACCCACCAATCCACAGCGAGACCCGACCCCGCCGTCGCGATGAG
GCCGGCGCTGCTCAAGTCCACGGCGGAGGTTTTCAAGAAGGCTGGTACTTATGATGAGAA
GAAGCTGTTTGGTGTGACTACTCTTGATGTTGTTCGTGCTAAAACTTTTTATGCTGGAAA
AGCGGGTGTGCCAGTTACTGGGGTGAATGTTCCTGTTGTCGGAGGCCATGCGGGTATTAC
TATTCTGCCACTCTTCTCGCAGGCCACTCCTGCAAGCAATTCATTGTCCCAAGAAGACAT
TGAGGCCCTCACCAAGAGGACACAAGATGGTGGGACAGAGGTGGTTGAAGCAAAGGCGGG
AAAAGGCTCTGCAACGTTGTCCATGGCATATGCTGGTGCTGTTTTTGCAGATGCATGTTT
GAAGGGTCTGAATGGAGTTCCAGACATTGTAGAGTGCTCTTTTGTGCAATCAACTGTGAC
AGAGTTGCCATTCTTTGCCTCCAAGGTTCGGCTCGGCAAGAATGGAGTGGAGGAAGTGCT
TGGTCTGGGTGAGCTCAACGAGTTCGAGAAGAAGGGGCTGGAAAACCTCAAGGGCGAGCT
CAAGTCTTCCATCGACAAGGGTATCAAGTTTGCCCACGGGAACTAGGCACCTTGCCCGGC
TTCTAACAATTGATGCCCCTTGCATTTTTGTTTGACTGCCTATTTTTCCTGCCCCCCGTA
TGGTTGGGGCAATGAGGCGTAGTGGTCGATAATAAAACCCAGCGGAACAAAGAAAACGTG
TACCAGAAACTGTTTGCAAACACCGGTGCCTTTTTTTTTGTGTTGAACCACCATTAGTTG
AGCCGTGAGGGAATGGTGAACAAGCTTTCCACTTGC