Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039086_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:169733422:169738386:-1 gene:Zm00001d039086 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	ATGGTGGCCGGCAGGGTCAAGGCGGCCATGGGCTTCCAGCGGAGCCCGGCCACGCCCAAG CCCGGGGCCTCCTCCTCCTCCTCCTCCTCGCGCAAGGCGCCGCCGCCGCTGCAGCTGCCC GGGTCGGCCGCGCTGCCGGAGACGCCGCGCCGGAGGTCCTCGGGCTCTCCGGCGCCGCCA GGCTCCGGGTCCAAGGGCGGCGGCGGCCCATTCTCGCGCTACTTCCCGCGGTCGTCCGCG CAGGTGCAGCCGGCGCGCGCGTCGGGCCAGCCCGAGCCGCCGCCGCCGCCGCCGCCGCCG CCGTCGTGCCCGGGCCCCGCCGCCGCCGCTGACCTCGCCCGCCTCGTCGAGGAGCTCCGG GAGCGCGAGTCCCGCCTCCGCACCGAGCTGCTGGAGCACAAGATCCTCAAGGAGACCGTC GCCATCGTGCCGTTCCTCGAGACCGAGCTCGCCGCCAAGAGCAGCGACCTCGGCCGCTGC CGCGACGCGCTGTCGCGCCTCGAGGCCGAGAACGCAAGCCTCCGCGCCGAGCTCCACGCC GCCAGGGGCAGCCAGCAGAGGGTGGTTCAGCTGGAGAAGGAGCTGGCGGAGGTGAAGAGG CACCGTCGCCGGGACTCCGGCCCCGATGCCGACCGTCACGATGATGACTGCTCGTCGTCG GTGTCGTCGCACAACTCCGACTCCGATCGCTCCAATGCGCCGACCAACGCGGTCGTGCCC GGGCTGTTGATCGTCCCTCCTCCTGCTCCTCCTCCTCCTCCCCCGCCGCCGCCGCCGCCT TCTTACAAGTCCAGGTCCTACTTCTCTGCCTCGTCGCGCGCATCGCCGGCCAACTCCTCC TCGTCCAGCTCCACCTCGTCCGCGCCATCGACGCCAACCTACTCTTCAGACACCGCGGCG TCGCGAAACCGCGTGCCGGAGCTCTCCCAGCTCCCGCCGATACCCGCCCCACCCCCGCCG CCGCCCCCACCCCCGCCACCGGCAATGCCGGCGCGCGGACGCCGCAGCGCGTGCTCGTCA CCTTCGACCTCGAGCGGCAGCAGCGGCGGCGGCTGCGGCAGAGGCTCGGGGCCTCCTGCG CCGCCGCCGCCGCCTCCGCCTGCGGCGAGGAGGAGCTCCAGAGCTTCGTCCCCTGCGGCT TCGGGAACGGCCCCGGCGCCCGCCCCCTGCGTCAGGCGAGTCCCCGAGGTGGTGGAATTC TACCACTCGCTAATGCGGAGGGACTCCAGGTCTAGGGACGCCGCCGCTGCCGCCGAAGCT GGCGCCAGTGGGGGTGCCGCCGCCGCGAGGGATATGATCGGCGAGATCGAGAACCGCTCT TCTCATCTTCTCGCGATCAAATCAGACGTGGAGAGGCAGGGCGACTTCATCCGGTTCCTG ATCAAGGAGGTGCAGGGCGCGGCGTTCGTCGACATCGAGGACGTGGTCACCTTTGTCAAG TGGCTGGACGTCGAGCTCTCACGTCTGGTGGACGAGAGGGCGGTGCTGAAGCACTTCGAC TGGCCGGAGGGGAAGGCGGACGCGCTGCGTGAGGCCGCGTTCGGGTACCGCGACCTGAAG AAGGTCGAGTCGGAGGCGTCGTCCTTCTGCGATGACCCCCGGCAGCCCTGCTCTTCTGCT CTCAAGAAGATGCAGGCCGTCTTCGAGAAGTTAGAGCATGGAGTGTACAGCCTTGTGCGT GTGCGAGACGGCGCAATGAGCCGGTACCGTGGGTATCAGATCCCATGGGAGTGGATGCAG GACACTGGAATTGTTAGTCAGATCAAACTGCAATCAGTGAAGCTGGCAATGAAGTACCTG AGGAGGGTTTCCTCAGAGATTCAGGCCATACAGGTCGGCCCTGACGAAGAGGAGCTGGTG CTTCAAGGAGTCCGATTTGCCTTCAGAGTGCACCAGTTTGCAGGCGGTTTCGACGTCGAT ACGATGCGCGCCTTTCAGGAGTTGAAGGAGACGGCGTCAGCCTTTCAGCAGTGGGGAGGC CAAAACCAACACCTGCATCAGCAAAGGCTCGCTGGCAGAAGTTGA

Peptide Sequence

PEP ID	Zm00001d039086_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:169733422:169738386:-1 gene:Zm00001d039086 transcript:Zm00001d039086_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	MVAGRVKAAMGFQRSPATPKPGASSSSSSSRKAPPPLQLPGSAALPETPRRRSSGSPAPP GSGSKGGGGPFSRYFPRSSAQVQPARASGQPEPPPPPPPPPSCPGPAAAADLARLVEELR ERESRLRTELLEHKILKETVAIVPFLETELAAKSSDLGRCRDALSRLEAENASLRAELHA ARGSQQRVVQLEKELAEVKRHRRRDSGPDADRHDDDCSSSVSSHNSDSDRSNAPTNAVVP GLLIVPPPAPPPPPPPPPPPSYKSRSYFSASSRASPANSSSSSSTSSAPSTPTYSSDTAA SRNRVPELSQLPPIPAPPPPPPPPPPPAMPARGRRSACSSPSTSSGSSGGGCGRGSGPPA PPPPPPPAARRSSRASSPAASGTAPAPAPCVRRVPEVVEFYHSLMRRDSRSRDAAAAAEA GASGGAAAARDMIGEIENRSSHLLAIKSDVERQGDFIRFLIKEVQGAAFVDIEDVVTFVK WLDVELSRLVDERAVLKHFDWPEGKADALREAAFGYRDLKKVESEASSFCDDPRQPCSSA LKKMQAVFEKLEHGVYSLVRVRDGAMSRYRGYQIPWEWMQDTGIVSQIKLQSVKLAMKYL RRVSSEIQAIQVGPDEEELVLQGVRFAFRVHQFAGGFDVDTMRAFQELKETASAFQQWGG QNQHLHQQRLAGRS

Transcript Sequence

Transcript ID	Zm00001d039086_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:169733422:169738386:-1 gene:Zm00001d039086 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence	ATGGTGGCCGGCAGGGTCAAGGCGGCCATGGGCTTCCAGCGGAGCCCGGCCACGCCCAAG CCCGGGGCCTCCTCCTCCTCCTCCTCCTCGCGCAAGGCGCCGCCGCCGCTGCAGCTGCCC GGGTCGGCCGCGCTGCCGGAGACGCCGCGCCGGAGGTCCTCGGGCTCTCCGGCGCCGCCA GGCTCCGGGTCCAAGGGCGGCGGCGGCCCATTCTCGCGCTACTTCCCGCGGTCGTCCGCG CAGGTGCAGCCGGCGCGCGCGTCGGGCCAGCCCGAGCCGCCGCCGCCGCCGCCGCCGCCG CCGTCGTGCCCGGGCCCCGCCGCCGCCGCTGACCTCGCCCGCCTCGTCGAGGAGCTCCGG GAGCGCGAGTCCCGCCTCCGCACCGAGCTGCTGGAGCACAAGATCCTCAAGGAGACCGTC GCCATCGTGCCGTTCCTCGAGACCGAGCTCGCCGCCAAGAGCAGCGACCTCGGCCGCTGC CGCGACGCGCTGTCGCGCCTCGAGGCCGAGAACGCAAGCCTCCGCGCCGAGCTCCACGCC GCCAGGGGCAGCCAGCAGAGGGTGGTTCAGCTGGAGAAGGAGCTGGCGGAGGTGAAGAGG CACCGTCGCCGGGACTCCGGCCCCGATGCCGACCGTCACGATGATGACTGCTCGTCGTCG GTGTCGTCGCACAACTCCGACTCCGATCGCTCCAATGCGCCGACCAACGCGGTCGTGCCC GGGCTGTTGATCGTCCCTCCTCCTGCTCCTCCTCCTCCTCCCCCGCCGCCGCCGCCGCCT TCTTACAAGTCCAGGTCCTACTTCTCTGCCTCGTCGCGCGCATCGCCGGCCAACTCCTCC TCGTCCAGCTCCACCTCGTCCGCGCCATCGACGCCAACCTACTCTTCAGACACCGCGGCG TCGCGAAACCGCGTGCCGGAGCTCTCCCAGCTCCCGCCGATACCCGCCCCACCCCCGCCG CCGCCCCCACCCCCGCCACCGGCAATGCCGGCGCGCGGACGCCGCAGCGCGTGCTCGTCA CCTTCGACCTCGAGCGGCAGCAGCGGCGGCGGCTGCGGCAGAGGCTCGGGGCCTCCTGCG CCGCCGCCGCCGCCTCCGCCTGCGGCGAGGAGGAGCTCCAGAGCTTCGTCCCCTGCGGCT TCGGGAACGGCCCCGGCGCCCGCCCCCTGCGTCAGGCGAGTCCCCGAGGTGGTGGAATTC TACCACTCGCTAATGCGGAGGGACTCCAGGTCTAGGGACGCCGCCGCTGCCGCCGAAGCT GGCGCCAGTGGGGGTGCCGCCGCCGCGAGGGATATGATCGGCGAGATCGAGAACCGCTCT TCTCATCTTCTCGCGATCAAATCAGACGTGGAGAGGCAGGGCGACTTCATCCGGTTCCTG ATCAAGGAGGTGCAGGGCGCGGCGTTCGTCGACATCGAGGACGTGGTCACCTTTGTCAAG TGGCTGGACGTCGAGCTCTCACGTCTGGTGGACGAGAGGGCGGTGCTGAAGCACTTCGAC TGGCCGGAGGGGAAGGCGGACGCGCTGCGTGAGGCCGCGTTCGGGTACCGCGACCTGAAG AAGGTCGAGTCGGAGGCGTCGTCCTTCTGCGATGACCCCCGGCAGCCCTGCTCTTCTGCT CTCAAGAAGATGCAGGCCGTCTTCGAGAAGTTAGAGCATGGAGTGTACAGCCTTGTGCGT GTGCGAGACGGCGCAATGAGCCGGTACCGTGGGTATCAGATCCCATGGGAGTGGATGCAG GACACTGGAATTGTTAGTCAGATCAAACTGCAATCAGTGAAGCTGGCAATGAAGTACCTG AGGAGGGTTTCCTCAGAGATTCAGGCCATACAGGTCGGCCCTGACGAAGAGGAGCTGGTG CTTCAAGGAGTCCGATTTGCCTTCAGAGTGCACCAGTTTGCAGGCGGTTTCGACGTCGAT ACGATGCGCGCCTTTCAGGAGTTGAAGGAGACGGCGTCAGCCTTTCAGCAGTGGGGAGGC CAAAACCAACACCTGCATCAGCAAAGGCTCGCTGGCAGAAGTTGAGACGCATGTATTTAT AGCAATCCGTTACTACAGGATAGTGGAAGCATCTATTTACCTGGCCAAATGCTCCACTCC TTTTCTTTTTTTTTAACCTTCCCGTCAAGAAGCTATATTTCGACAGATTCTTTATTATTT TTAATATGCATAAGAGCATGCAGAAAGACGCTTAGCGTGTCAATACCTTGCGTGTGGGCT ATCATTTACACGCTCCTATGAGTGATTAACTCGCATCCATCGATGGACATTTCTCTCTTC TTACGTTCTCGCCTCAAGACAAGGATTTTACAGGTGCGAAAACACCCGTGTCTGCTTGTC GTGATTGATTTTTTTTCTATCACAAATTATCGAC