Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039072_T037
CDS Infomation

cds chromosome:B73_RefGen_v4:6:169545980:169552596:-1 gene:Zm00001d039072 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SUPPRESSOR OF PHYA-105 1
Sequence

ATGGAAGGGACGGCGGCGGAGGTGGGCGGCGCTGGCGCTGACGCGGCCGGGGATGTGCAG
ATTAAGGGTGCCAAGGAGAATGCGCAGCCCACGGCGGCGCAGCAGCAGCAGCCGTCCGGC
AGCGAGGCGCTGGAGATGCCGGCCACGCCACTCCAGCGGGACATAGACTGGTCCGAGCAT
TTCTCCTTCTTCACCTCGCTGGGTGGGTTCGGGGGCAGCTCGGACGGCGCGAGGGGCCTC
ACCAGCGTCGGCCTGTCCAATTCCGAGTCCAGGCCAGACAGTGTGGCACAGCGTGGCTTG
GACCACGACACTGAAGAGAGGGTGGAGGAGCTCACATTGAAGAATTGCATCAATACTGGT
ATCCAGCCTGAGGTTTCTGCTGGTGGGAGCACAAGCAGCAGGGATAGGCCTACCCGTATT
AAGGGCCTGTGGGGTAATTTTACACGGATCGCCCGGAGAACTAGCGATTTGGCCAGCAGG
GAAAACACCGCACTGAGTTCTGGCGACATTGCAAACTTGAGGGCTGGTGATGCTTCTAGC
ATGGAAAAGCTGGCGACGAGCCTTGCCAGCAATATCATCTCAAGGAACAACAATGCGTCT
GGCAATGAGGCACCTATGAGTCATGTTGGATATGTCAATAATGAGTTCATGATGTGCAGC
CAGCAGATTCTCTTGTCTCCATGGTCTAATCAGGATAATGCTCTTAAAGTAAGCAGCTTC
TCAAATAGGATTCTTAACCGGATGAGAAGTAAGACTGTGGCACCCTCATCTAGGGTTCTA
CGATCACCACTTCAAATCAAATCAAAAGGTAAAGGGGTTGTGTGCCAAGGTGCACGGGAG
GAGATCCAAGTGCAAGCTAATGCAAGACCCAGAGACCCTTTGGACAAGATTCCGACTATT
CCTAGCTCAATTCATGATTGTATGGCCAGAGTGGACCATATGCTTTTCAGTACTGGTGGA
AATGTTACAAAATCCCACTCTGAGGGATCTAGCCTGAGGGAACTGATTAAGCCTGGGTGG
CAAACAATGACTAAGTTTGAGAAAATGCATTTGTTTAAGCAGATCATTGATCTTGTGGAT
AAGTGTCATGCACAGGGTTTTACTTTGCAGCATTTGCGACCATCATATTTTATGGTCCTT
TCTTCAAATCAAGTTAAATATATCGGCTCTTATACCACACAAGATTTGCCAACATCAATC
AAACAAGAGGTTGCTAGAGAAGATCTTGTGAATAGAAAAAGAACTTTTGGACAGAGAATT
GATCACCAAGAGTCTAATGACCATGGAAATTTGACGCTGAAGTATCAAAAGGTTGATGAG
CAAGGCTCAGTCGCTATCAGGCAACCAGCAAATACATTTTGGACCGACAAAATATGTGAC
AATCAAAATGAAGATGTCAATCGAGGTGTTTTGAGGCAAGAAAATTTTAGCCACACTGCC
AGAGAAGGTTTTAAGTTGGTCGAACCATATGGCAGTAATATATCTTGTGCTCAGCATGTA
TCTAGTTCTGCCACCCAACAACCAGCATTTGAATTGAGGAATCTTGAGGAAAGCTGGTAC
AAAAGCCCAGAGGAGCTCAGTCAATTTAAAGGCACATTCCCATCAAACATCTACAGCCTT
GGGGTTCTTCTATTTGAGCTCTTTTGCTGTTCTGAGACATGGGAGGTGCACTGTGCTGCA
ATGTCAAATCTTCGTCAACGCATCCTGCCTCCAAATTTTCTTTCAGAAAGTCCCAAGGAG
GCTGGCTTCTGCCTTTGGTTGCTGCATCCAGATCCTTGTTCAAGACCAAAAGCAAAAGAG
ATTCTTGGATGTGACTTGATAAATGGGGGTCAGGATTTGTCGTTGTTAGATGAGGCACCA
GTTTCCATCGGTGAAGATGACACTGAATCTAGTTTGCTACTTAACTTCCTTTCTCAATTG
AAAGAAGAAAAGGCGATGCAGTCTGCCAAGTTATCGGCAGAGCTTGGAAGCTTACAAACA
GATATCACAGAGGTTGACAAAAGACACTCAGCAAGAATGAGATTGAGTTTAGATGATACA
GATGTACTGCCAAGTTCTAGTGCTTTGTCAGGAGCTTCTGTGAGTGCCCTTCAAGGTGCA
TTGCTGTCAGGTTTGTTACCAGCGTCATACAAGTCGAGCATATATGAGGAGAGGGTAATG
AGGAATTTGGTGCAGCTTGAAAATGCATACTACTCCATGAGGTCCTCGCTGGACACCTGT
GAAACAAATGTAATCAAACGGCCAGATAACGAGGCTTTGAGGGCCCGTGAAAATTTCCAT
CAACTTCATAGTGATTCTGATGCCAAGGACGAGAAAACAGATCGTCTTGGATGCTTTTTT
GATGGTTTATGCAAATATGCCCGGCACAATAGGTTTGAGGTACGAGGAATTTTGAAGAAT
GCAGATATACTTAACTCTCCGAATGTCATCTGTTCGTTGAGTTTTGATAGGGATGAAGAA
TATTTTGCTGCTGCTGGAGTTTCAAAGAAAATAAAAATATTTGAATTTGATGCACTCTTA
AATGATCGTGTTGATATTCATTACCCACTGATAGAGATGCCTAGCAAGTCCAAGCTTAGC
TGTGTCTGTTGGAACAACTATATAAAGAACTACCTGGCTTCAACAGACTATGATGGCACT
GTTCAGCTATGGGATGCCAGCTCTGGTCAAGGATTCACACAGTTTACAGAGCACCGGAAA
AGGACTTGGTCTGTGAGTTTTTCAGATGTCGACCCTACTAAGTTGGCAAGTGGTAGTGAT
GATTGTTGCGTGAAAGTATGGAGTATTAATCAGGCATGTTACTGA

Peptide Sequence

PEP ID

Zm00001d039072_P037
PEP Infomation

pep chromosome:B73_RefGen_v4:6:169545980:169552596:-1 gene:Zm00001d039072 transcript:Zm00001d039072_T037 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SUPPRESSOR OF PHYA-105 1
Sequence

MEGTAAEVGGAGADAAGDVQIKGAKENAQPTAAQQQQPSGSEALEMPATPLQRDIDWSEH
FSFFTSLGGFGGSSDGARGLTSVGLSNSESRPDSVAQRGLDHDTEERVEELTLKNCINTG
IQPEVSAGGSTSSRDRPTRIKGLWGNFTRIARRTSDLASRENTALSSGDIANLRAGDASS
MEKLATSLASNIISRNNNASGNEAPMSHVGYVNNEFMMCSQQILLSPWSNQDNALKVSSF
SNRILNRMRSKTVAPSSRVLRSPLQIKSKGKGVVCQGAREEIQVQANARPRDPLDKIPTI
PSSIHDCMARVDHMLFSTGGNVTKSHSEGSSLRELIKPGWQTMTKFEKMHLFKQIIDLVD
KCHAQGFTLQHLRPSYFMVLSSNQVKYIGSYTTQDLPTSIKQEVAREDLVNRKRTFGQRI
DHQESNDHGNLTLKYQKVDEQGSVAIRQPANTFWTDKICDNQNEDVNRGVLRQENFSHTA
REGFKLVEPYGSNISCAQHVSSSATQQPAFELRNLEESWYKSPEELSQFKGTFPSNIYSL
GVLLFELFCCSETWEVHCAAMSNLRQRILPPNFLSESPKEAGFCLWLLHPDPCSRPKAKE
ILGCDLINGGQDLSLLDEAPVSIGEDDTESSLLLNFLSQLKEEKAMQSAKLSAELGSLQT
DITEVDKRHSARMRLSLDDTDVLPSSSALSGASVSALQGALLSGLLPASYKSSIYEERVM
RNLVQLENAYYSMRSSLDTCETNVIKRPDNEALRARENFHQLHSDSDAKDEKTDRLGCFF
DGLCKYARHNRFEVRGILKNADILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALL
NDRVDIHYPLIEMPSKSKLSCVCWNNYIKNYLASTDYDGTVQLWDASSGQGFTQFTEHRK
RTWSVSFSDVDPTKLASGSDDCCVKVWSINQACY

Transcript Sequence

Transcript ID

Zm00001d039072_T037
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:169545980:169552596:-1 gene:Zm00001d039072 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SUPPRESSOR OF PHYA-105 1
Sequence

GCGGCGAATGTCGCTATTTGGATCGTGCGAATCCTCCTGACCCGTGGCCCGGAACCGCAG
CCAATCGCACGCGGGGTCGGGGGCTCGTGGCGGCGCTGCGCTGTGCGCGAGGATGCGCCG
CGCGGGCGGCTCGCTGCTGGTCTGTTGCGCGCGCCCGCCGCGAGGTATGGCTCCCCGCCG
CTGAATCGGTCCTGGGGCGGTTTTTGCCTTTGCGCGACTTGGCCCGTGCGCCGTGACCTT
ATTGCGCGGGCGACGCGCGGTTTTCGCAGGGTAGGTTTGGTGCCATGGAAGGGACGGCGG
CGGAGGTGGGCGGCGCTGGCGCTGACGCGGCCGGGGATGTGCAGATTAAGGGTGCCAAGG
AGAATGCGCAGCCCACGGCGGCGCAGCAGCAGCAGCCGTCCGGCAGCGAGGCGCTGGAGA
TGCCGGCCACGCCACTCCAGCGGGACATAGACTGGTCCGAGCATTTCTCCTTCTTCACCT
CGCTGGGTGGGTTCGGGGGCAGCTCGGACGGCGCGAGGGGCCTCACCAGCGTCGGCCTGT
CCAATTCCGAGTCCAGGCCAGACAGTGTGGCACAGCGTGGCTTGGACCACGACACTGAAG
AGAGGGTGGAGGAGCTCACATTGAAGAATTGCATCAATACTGGTATCCAGCCTGAGGTTT
CTGCTGGTGGGAGCACAAGCAGCAGGGATAGGCCTACCCGTATTAAGGGCCTGTGGGGTA
ATTTTACACGGATCGCCCGGAGAACTAGCGATTTGGCCAGCAGGGAAAACACCGCACTGA
GTTCTGGCGACATTGCAAACTTGAGGGCTGGTGATGCTTCTAGCATGGAAAAGCTGGCGA
CGAGCCTTGCCAGCAATATCATCTCAAGGAACAACAATGCGTCTGGCAATGAGGCACCTA
TGAGTCATGTTGGATATGTCAATAATGAGTTCATGATGTGCAGCCAGCAGATTCTCTTGT
CTCCATGGTCTAATCAGGATAATGCTCTTAAAGTAAGCAGCTTCTCAAATAGGATTCTTA
ACCGGATGAGAAGTAAGACTGTGGCACCCTCATCTAGGGTTCTACGATCACCACTTCAAA
TCAAATCAAAAGGTAAAGGGGTTGTGTGCCAAGGTGCACGGGAGGAGATCCAAGTGCAAG
CTAATGCAAGACCCAGAGACCCTTTGGACAAGATTCCGACTATTCCTAGCTCAATTCATG
ATTGTATGGCCAGAGTGGACCATATGCTTTTCAGTACTGGTGGAAATGTTACAAAATCCC
ACTCTGAGGGATCTAGCCTGAGGGAACTGATTAAGCCTGGGTGGCAAACAATGACTAAGT
TTGAGAAAATGCATTTGTTTAAGCAGATCATTGATCTTGTGGATAAGTGTCATGCACAGG
GTTTTACTTTGCAGCATTTGCGACCATCATATTTTATGGTCCTTTCTTCAAATCAAGTTA
AATATATCGGCTCTTATACCACACAAGATTTGCCAACATCAATCAAACAAGAGGTTGCTA
GAGAAGATCTTGTGAATAGAAAAAGAACTTTTGGACAGAGAATTGATCACCAAGAGTCTA
ATGACCATGGAAATTTGACGCTGAAGTATCAAAAGGTTGATGAGCAAGGCTCAGTCGCTA
TCAGGCAACCAGCAAATACATTTTGGACCGACAAAATATGTGACAATCAAAATGAAGATG
TCAATCGAGGTGTTTTGAGGCAAGAAAATTTTAGCCACACTGCCAGAGAAGGTTTTAAGT
TGGTCGAACCATATGGCAGTAATATATCTTGTGCTCAGCATGTATCTAGTTCTGCCACCC
AACAACCAGCATTTGAATTGAGGAATCTTGAGGAAAGCTGGTACAAAAGCCCAGAGGAGC
TCAGTCAATTTAAAGGCACATTCCCATCAAACATCTACAGCCTTGGGGTTCTTCTATTTG
AGCTCTTTTGCTGTTCTGAGACATGGGAGGTGCACTGTGCTGCAATGTCAAATCTTCGTC
AACGCATCCTGCCTCCAAATTTTCTTTCAGAAAGTCCCAAGGAGGCTGGCTTCTGCCTTT
GGTTGCTGCATCCAGATCCTTGTTCAAGACCAAAAGCAAAAGAGATTCTTGGATGTGACT
TGATAAATGGGGGTCAGGATTTGTCGTTGTTAGATGAGGCACCAGTTTCCATCGGTGAAG
ATGACACTGAATCTAGTTTGCTACTTAACTTCCTTTCTCAATTGAAAGAAGAAAAGGCGA
TGCAGTCTGCCAAGTTATCGGCAGAGCTTGGAAGCTTACAAACAGATATCACAGAGGTTG
ACAAAAGACACTCAGCAAGAATGAGATTGAGTTTAGATGATACAGATGTACTGCCAAGTT
CTAGTGCTTTGTCAGGAGCTTCTGTGAGTGCCCTTCAAGGTGCATTGCTGTCAGGTTTGT
TACCAGCGTCATACAAGTCGAGCATATATGAGGAGAGGGTAATGAGGAATTTGGTGCAGC
TTGAAAATGCATACTACTCCATGAGGTCCTCGCTGGACACCTGTGAAACAAATGTAATCA
AACGGCCAGATAACGAGGCTTTGAGGGCCCGTGAAAATTTCCATCAACTTCATAGTGATT
CTGATGCCAAGGACGAGAAAACAGATCGTCTTGGATGCTTTTTTGATGGTTTATGCAAAT
ATGCCCGGCACAATAGGTTTGAGGTACGAGGAATTTTGAAGAATGCAGATATACTTAACT
CTCCGAATGTCATCTGTTCGTTGAGTTTTGATAGGGATGAAGAATATTTTGCTGCTGCTG
GAGTTTCAAAGAAAATAAAAATATTTGAATTTGATGCACTCTTAAATGATCGTGTTGATA
TTCATTACCCACTGATAGAGATGCCTAGCAAGTCCAAGCTTAGCTGTGTCTGTTGGAACA
ACTATATAAAGAACTACCTGGCTTCAACAGACTATGATGGCACTGTTCAGCTATGGGATG
CCAGCTCTGGTCAAGGATTCACACAGTTTACAGAGCACCGGAAAAGGACTTGGTCTGTGA
GTTTTTCAGATGTCGACCCTACTAAGTTGGCAAGTGGTAGTGATGATTGTTGCGTGAAAG
TATGGAGTATTAATCAGGCATGTTACTGAAATACATCCACGCATTTCTTTATCAGCTTAT
CTGCAGTTTTCTTACTTTTGACTCCTTATTTTGAGCATGTGTGTTATGTCATTCATTCCT