Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039051_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:6:169294006:169306439:1 gene:Zm00001d039051 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar transporter ERD6-like 6
Sequence

ATGGCGAGGAGCAGGACGTCGGGCGGCGGCGAGTACGAGAGCGGCAGCGACCACGACGGC
GCGCTGCAGAAGCCGCTGCTGCCCAACAGCGGGAGCTGGTACCGGATGGGGATGGGGTCG
CGCCAGTCCAGCCTCAACGCCGCCGGCACCTCCTCCATGGCCGTCCTGCGCGAGTCCCAC
GTCTCCGCCTTCCTCTGCACGCTCATCGTCGCGCTCGGCCCCATCCAGTTCGGCTTCACC
GGCGGCTACTCCTCCCCGACGCAGGCCAGCATCATCCGGGACCTCAACCTCTCCATCTCC
GAGTTCTCGGTGTTCGGCTCGCTGTCCAACGTGGGCGCCATGGTCGGGGCGATCGCCAGC
GGCCAGATGGCCGAGTACGTTGGCCGCAAAGGGGACTCTTCATTTCTGTATATGGGACGC
TTGCTTGAAGGATTCGGTGTCGGTATCATTTCCTATGTGGTACCGGTATACATAGCAGAG
ATATCTCCACAAAACATGAGAGGGGCTCTTGGCTCTGTGAACCAGTTATCTGTAACCCTT
GGTATCATGTTTGCCTATTTGCTCGGCTTGTTTGTTCCTTGGAGGCTTCTTGCAGTAATA
GGAACCTTGCCCTGCATAGTGTTGATACCTGGCCTTTTCTTCATTCCGGAATCTCCAAGA
TGGCTGGCAAAGATGAATATGATGGATGATTGCGAGACTTCTCTACAAGTTCTGAGAGGA
TTCGATGCTGACATCACTGCAGAATTGAATGATATAAAGAGAGCAGTAATGTCAGCAAAC
AAAAGGGCTACAATTCGTTTCCAAGAGTTGAACCAAAAGAAATACCGAACGCCCCTAATT
ATAGGAATTGGTCTACTTGTGCTGCAACAGCTAAGTGGAATAAATGGTATACTATTTTAT
GCAAGTAGCATCTTCAAAGCTGCCGGTCTGAAGGACAGTGACTTGGACACCTTTGCACTT
GGAGCTATTCAGGCATGTTCTTGCCACTTTTGTTACAACCATGTTCTTGGACAGAGCTGG
GCGGCGAATCCTCCTTATTATTTCTTCTGCTGGGATGACTCTAAGTCTTCTTGTAGTTGC
TATTGTATTTTACATCAAGGTATGTTCAGGTTCCTTTGTGATAAGATTCTGATGAGAAAA
CAGTTCTTCTTCTGTACTCTTTGCACTACTGCAGATAATATTTCACATGACTCTGACTTG
TATGACATCTTAAGTATGGTGTCCTTGGTTGGTGTCGTGGCTTATGTCATTGCCTTCTCC
TTCGGTATGGGTGCCATTCCTTGGATCATAATGTCTGAGATCCTCCCAGTTAGCATCAAG
AGTCTTGCAGGAAGCTTCGCGACCCTTGCCAACTGGTTGACATCCTTTGGAATAACAATG
ACGGCAAATTTGCTGATCAGCTGGAGTGCTGGAGGTACGTTTACCTCCTACATGATTGTG
AGTGCCTTCACTCTCGTGTTCGTAATCGTTTGGGTGCCAGAGACAAAGGGAAGAACCCTC
GAAGAGATACAATGGTCGTTCCGCTGA

Peptide Sequence

PEP ID

Zm00001d039051_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:6:169294006:169306439:1 gene:Zm00001d039051 transcript:Zm00001d039051_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar transporter ERD6-like 6
Sequence

MARSRTSGGGEYESGSDHDGALQKPLLPNSGSWYRMGMGSRQSSLNAAGTSSMAVLRESH
VSAFLCTLIVALGPIQFGFTGGYSSPTQASIIRDLNLSISEFSVFGSLSNVGAMVGAIAS
GQMAEYVGRKGDSSFLYMGRLLEGFGVGIISYVVPVYIAEISPQNMRGALGSVNQLSVTL
GIMFAYLLGLFVPWRLLAVIGTLPCIVLIPGLFFIPESPRWLAKMNMMDDCETSLQVLRG
FDADITAELNDIKRAVMSANKRATIRFQELNQKKYRTPLIIGIGLLVLQQLSGINGILFY
ASSIFKAAGLKDSDLDTFALGAIQACSCHFCYNHVLGQSWAANPPYYFFCWDDSKSSCSC
YCILHQGMFRFLCDKILMRKQFFFCTLCTTADNISHDSDLYDILSMVSLVGVVAYVIAFS
FGMGAIPWIIMSEILPVSIKSLAGSFATLANWLTSFGITMTANLLISWSAGGTFTSYMIV
SAFTLVFVIVWVPETKGRTLEEIQWSFR

Transcript Sequence

Transcript ID

Zm00001d039051_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:169294006:169306439:1 gene:Zm00001d039051 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar transporter ERD6-like 6
Sequence

CCGCATCGATTGTTGTCCGCTGTTCTCCTTCCTCCTCGTCCTCCTTCAGGCCAGCGGGCA
AGAAGAAGAAGAAGAAAAATCAAGGCTTGCGGCGAGAGGCTGTGCCCGGCCGTCCTGCGC
GAGTCCCACGTCTCCGCCTTCCTCTGCACGCTCATCGTCGCGCTCGGCCCCATCCAGTTC
GGCTTCACCAGCGGCTTCTCCTCCCCGACCCAGGACGCCATGGTTCGGGACCTCAACCTC
TCTATCTCCGAGTTCTCGGCGTTCGGATCGCTGTCCAACGTCGGCGGCATGGTCGGGGCG
ATCGCCAGCGGGCAGATGGCCGAGTACATTGGCCGTAAAGGGTCGTTGATGATTGCTGCA
ATCCCAAATATCATCGGTTGGCTTGCGATCTCCTTTGCAAAAGATGCCTCATTTCTATAT
ATGGGACGATTGCTTGAAGGGTTTGGTGTCGGCATCATATCCTACACGGTACCGGTATAC
ATAGCAGAGATATCTCCTCAGAACATGAGGGGAGCTCTTGGTTCTGTGAACCAGTTGTCT
GTGACCTTTGGCATATTCTTGGCCTATTTGCTCGGCATGTTTATTCCTTGGAGACTTCTT
GCTGTGATTGGAGCCTTGCCCTGCACAATGTTGATTCCTGGACTATTCTTCATTCCAGAA
TCTCCCAGATGGCTGGCAAAGATGAATTTGACGGAAGATTGTGAGACGTCCCTACAAGTG
CTGAGGGGGTTTGAGACTGACATCACAACAGAAGTGAATGATATAAAGAGGGCAGTGGCA
TCATCAAGTAAGAGGACCACAATCAGTTTTCAAGAATTAAACCAAAAGAAATACCGCACG
CCACTACTTCTAGGGATTGGCCTACTTGTACTGCAAAATCTTAGTGGAATCAACGGTGTA
CTGTTTTATGCAAGTAGCATCTTCAAAGCTGCAGGGGTTACAAACAGCGACTTGGCCACC
TGTTCACTTGGTGCTATTCAGGTCCTTGCTACTGGAGTTACAACATGGCTGTTAGACCGA
GCTGGACGACGCATCCTTCTCATTATTTCTACCTCTGGCATGACTCTATGCCTTCTTGCC
GTTTCTGTTGTATTTTTTCTCAAGGATAACATTTCACAGGATTCTAACTCATACTACATC
TTAACAATGATCTCCCTTGTTGGTATTGTGTCTTTTGTCATTACCTTCTCGTTTGGTATG
GGTGCCATTCCATGGCTCATGATGTCTGAGATCCTCCCGGTTAGCATCAAGAGCCTTGGC
GGAAGCATCGCAACACTGGCCAACTGGCTGACATCCTTCGCCATAACAATGACGACGAAC
TTGATGCTCACGTGGAGTGTTGGAGGCACTTTTCTCTCGTACATGGTTGTGAGCGCCTTC
ACCATCGTTTTTGTTGTCCTTTGGGTGCCGGAGACGAAGGGGAGAACTCTAGAGGAGATA
CAATTTTCGTTTCGCTGAGCATTCAGCGTCAGCTGCAATGGTTGCCCGAGTGTTTATCTT
AGGGCCTGTTTCGATCCCATGAGCTAAAGCAAAAAGAAGCTAAAATTTAGTCACTTTATA
AACTAAAGTTCCAATCAGGAGGAGCTAAAAGTGAATAAAATAGCAAAAGAATATCTTTTA
GTCACTTTTAGCTTCTAAAGAGGAGCTAGAATTTAGTCCCTTGTTTTAGCTTATACTCCT
TCCATCCTAAAAAAATATAGGTCTTTCTAACTTTTCTTTTTTCTGTTCATATTCATTCGA
ATAATGATAAATATAGACATACGTATAAACTATTCATTAATAAATGTATCAAATAAATTA
TAGGCCTGTTTGGTTTGCTGTCTAATTTATCATATTTTACCACACTTTTGTGACTAATAT
TATGGCCCGTTTGGCACAGCTCCAGCTCCTGATTCTAAGCGAGGATCTGGAGGAGCCGTG
CCAAACGGATATTTTTTAAACTGATTCTCGTGTGGAGCCGAAAGATCGGGAGTCGTTTTT
GTGAAGAAAGGTGGGATCTAAAAAAACCTGCTCCACCCTCCATTAAAACAGCTCCTCAAC
CAACCAAATATGGACCTCCCCTTAAAGTTTAATCGAAATTACCCGCAATTGCCATTGGAC
AAAAACATAACGACCCAATTTATGGATTAAACATTTGAGACCATTTTATGCACTACTATT
ATGAGAATATTTTATATATTATTTTTTTCATTTTTTTTCTATATATGCATCCTACTTATT
GGTTTGTAACAAAGTTGAACTGCATAAGATAAAACAGACAATCGTCACAGACCACCAACT
CTCAGAAGACAGAATCAGTTTACTTGCCAAACGGTTTTAAAAATGATTCTGATTTTTTAG
GAGAATCAGGAGGATCAGCTCCTCACAAGGATCAGGATTTGGAGCTAAAGAAGCAGGAGC
TAGAGCTTTGCCAAACGGGTCCTTAGTTCGTTAATTCGAATGACTAACCTTAGATAAGCT
AGGACACATTTAGCCATAAAGGCATCCTGCGCTAGCGTCCAAGAAAGGAAAAGAAAATAC
ATGTGGGCTTTGTTGACTAGCATCCCTGCGCTAGCGGCGAGCCGGTGATAGAAGTTTTGG
CCCACCGAAATCTGGATCGAGTGGGTTGCAGCATGAAATCCGGCATGATATGGACATGCA
ACAGGTTCCTTGGTGGATCAAGGTCCACCCGACACTTCCGTCGAGGGAAGCGGGAAAGGA
GGCATAAGATATTTTCTTTTTCTAAGAGTTTTCATTTTCTCAAAAAAATAGTTATTTTTT
TTAGAAAATAGAAATCCTTTGGAGAGTTGCCAAACTAGTCTTAAAAGAAAAAGAGAATAA
CAAGCTAGTTTTTTTTATAAAGAGCCAAAAGCAACTCTAAGAGACTAGTTATATCGTTTT
GTAAAAGTAAAATTATCTATTATTAGAAGAAACATATATTTAATATCTTTAATATACTCT
GTAAATGGCTTTTAAAATTTAGTACATAACTCTTTATTCCTCTATTCCCTCTACCTTCCC
TTTGTAATTTTTTATAGCCTCATCCACTCGCCACCAATTGGAGAATTGAGCACATGTTTC
TTTTCTCGTACTAGCTTAATTGTTCCTCTCCGTACGAATGTGATGTGGCTGTGTGAGCGT
TCGCCACCAGCTATGGATCAGTGTGACAAGTGGATGATGAGCTGGATGGAAGTCGTGTGC
AGCACAGAAAAAGAGCAATAGTCCCTTCTGGGTCTCTGACGAGTGGGATCCTGGATAGAC
CTGCCTGGCACGATGACTGTTCCGGTGTTTCCCCATTCAACGGACTCCTGGTACTCCTCC
AGTCCTCCCTCCCGGCTCCCTCCCAGTACCCACGGTCCCACCCCACCCGGAGAAAACGAA
ACAAACCAAATCTCGCTGCGAGCTGGGCGGCGAGGGCGCGCGGCGCCATGGCGAGGAGCA
GGACGTCGGGCGGCGGCGAGTACGAGAGCGGCAGCGACCACGACGGCGCGCTGCAGAAGC
CGCTGCTGCCCAACAGCGGGAGCTGGTACCGGATGGGGATGGGGTCGCGCCAGTCCAGCC
TCAACGCCGCCGGCACCTCCTCCATGGCCGTCCTGCGCGAGTCCCACGTCTCCGCCTTCC
TCTGCACGCTCATCGTCGCGCTCGGCCCCATCCAGTTCGGCTTCACCGGCGGCTACTCCT
CCCCGACGCAGGCCAGCATCATCCGGGACCTCAACCTCTCCATCTCCGAGTTCTCGGTGT
TCGGCTCGCTGTCCAACGTGGGCGCCATGGTCGGGGCGATCGCCAGCGGCCAGATGGCCG
AGTACGTTGGCCGCAAAGGGGACTCTTCATTTCTGTATATGGGACGCTTGCTTGAAGGAT
TCGGTGTCGGTATCATTTCCTATGTGGTACCGGTATACATAGCAGAGATATCTCCACAAA
ACATGAGAGGGGCTCTTGGCTCTGTGAACCAGTTATCTGTAACCCTTGGTATCATGTTTG
CCTATTTGCTCGGCTTGTTTGTTCCTTGGAGGCTTCTTGCAGTAATAGGAACCTTGCCCT
GCATAGTGTTGATACCTGGCCTTTTCTTCATTCCGGAATCTCCAAGATGGCTGGCAAAGA
TGAATATGATGGATGATTGCGAGACTTCTCTACAAGTTCTGAGAGGATTCGATGCTGACA
TCACTGCAGAATTGAATGATATAAAGAGAGCAGTAATGTCAGCAAACAAAAGGGCTACAA
TTCGTTTCCAAGAGTTGAACCAAAAGAAATACCGAACGCCCCTAATTATAGGAATTGGTC
TACTTGTGCTGCAACAGCTAAGTGGAATAAATGGTATACTATTTTATGCAAGTAGCATCT
TCAAAGCTGCCGGTCTGAAGGACAGTGACTTGGACACCTTTGCACTTGGAGCTATTCAGG
CATGTTCTTGCCACTTTTGTTACAACCATGTTCTTGGACAGAGCTGGGCGGCGAATCCTC
CTTATTATTTCTTCTGCTGGGATGACTCTAAGTCTTCTTGTAGTTGCTATTGTATTTTAC
ATCAAGGTATGTTCAGGTTCCTTTGTGATAAGATTCTGATGAGAAAACAGTTCTTCTTCT
GTACTCTTTGCACTACTGCAGATAATATTTCACATGACTCTGACTTGTATGACATCTTAA
GTATGGTGTCCTTGGTTGGTGTCGTGGCTTATGTCATTGCCTTCTCCTTCGGTATGGGTG
CCATTCCTTGGATCATAATGTCTGAGATCCTCCCAGTTAGCATCAAGAGTCTTGCAGGAA
GCTTCGCGACCCTTGCCAACTGGTTGACATCCTTTGGAATAACAATGACGGCAAATTTGC
TGATCAGCTGGAGTGCTGGAGGTACGTTTACCTCCTACATGATTGTGAGTGCCTTCACTC
TCGTGTTCGTAATCGTTTGGGTGCCAGAGACAAAGGGAAGAACCCTCGAAGAGATACAAT
GGTCGTTCCGCTGAGCACCAACATCGTCAAAATGCGAAATGGTTCTTCGAGTTTTGTCGC
TTTAGATACTCAAATCACTCGACGAAGGCCACACATTCTTTCTGTTCATAAAAGGTCTTG
TACATGAGATTGCATACACCGTTGTTATAACTTTACCCCCAATAGACTTGTAAATGCTTG
TGCAGTAACTCTTATATTACTTTTGCTTCAACATTGTAAGATAGAAGACTTGCCAAAATA
AAATCTGAACCTTGGGTCCAATATTCCATGTAAACACGAGCATGTTTCTTGATCAATCAA
AATCTCAAGCATTTTTGTTGAA