Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039050_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:169248094:169248969:-1 gene:Zm00001d039050 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-3-methyladenine glycosylase 1

Sequence

ATGGGGCGACCGGCGCGCTCCCGTTCTCCAGCCACAGAGCCGCCTCCGGCGGTCACCGGC
CTTCGCTCCTCCAAGATCTCCTTTCGCTCCCGTAAGATCGTCAAGACAGCATCCGCGAAA
CCTTTGGCCACGACCGCCCTGGCACTAGCGCCGCAGGCGCCTCCGCCTCCAGTGCTTCCT
GCGCTGTCGTCCCCCGGAGAGCTTGCGGCCGCGCTGCGCCACCTCCAAGCCGCGGACCCT
CTCCTCACCGCGGTCATTGCCAACACTGAGGCGCCCACCTTCACCGCCACACCCTCCCTC
CCCGCGTTCCACTCCCTCGCGCGCTCCATCCTATACCAGCAGCTCGCGACCTCCGCTGCG
GACGCCATCTACGCACGCTTCCTTGCGCTCCTCCCCTCTGCTTCGGCGGCGGCCGCAGCC
GTAGCCGCTGACGCGGTCACACCTGCCGCCGTCCTTGCCCTCGCCGCCGCTGACCTGCGT
ACCATCGGCGTATCCGGCCGCAAGGCATCCTACCTCCACGACCTCGCGGCCAGATTCGCA
GCCGGGGAGCTCTCTGACTCCGCAGTCGCCGCGATGGATGAGGCTGCGCTCCTCGCGGAG
CTCACCAAGGTCAGAGGCGTCGGCGAGTGGACTGTCCACATGTTCATGATCTTCTCGCTG
CACCGCCCCGACATTCTGCCGTGTGGCGACCTCGGTGTGCGCAAGGGCGTGCAGGAGCTG
TACAAGCTCAAGTCGCTGCCCAATCCGGAGGAGATGGCAGCATTGTGCGAGCGGTGGAGG
CCATACCGGTCAGTCGGCGCGTGGTACATGTGGCGCCTCATGGAGAGCAAGGGCGCTGCG
TCCAAGAAGAAGAATAAGGGTAATGCGAGCTCTTAG

Peptide Sequence

PEP ID

Zm00001d039050_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:169248094:169248969:-1 gene:Zm00001d039050 transcript:Zm00001d039050_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-3-methyladenine glycosylase 1

Sequence

MGRPARSRSPATEPPPAVTGLRSSKISFRSRKIVKTASAKPLATTALALAPQAPPPPVLP
ALSSPGELAAALRHLQAADPLLTAVIANTEAPTFTATPSLPAFHSLARSILYQQLATSAA
DAIYARFLALLPSASAAAAAVAADAVTPAAVLALAAADLRTIGVSGRKASYLHDLAARFA
AGELSDSAVAAMDEAALLAELTKVRGVGEWTVHMFMIFSLHRPDILPCGDLGVRKGVQEL
YKLKSLPNPEEMAALCERWRPYRSVGAWYMWRLMESKGAASKKKNKGNASS

Transcript Sequence

Transcript ID

Zm00001d039050_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:169248094:169248969:-1 gene:Zm00001d039050 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-3-methyladenine glycosylase 1

Sequence

ATGGGGCGACCGGCGCGCTCCCGTTCTCCAGCCACAGAGCCGCCTCCGGCGGTCACCGGC
CTTCGCTCCTCCAAGATCTCCTTTCGCTCCCGTAAGATCGTCAAGACAGCATCCGCGAAA
CCTTTGGCCACGACCGCCCTGGCACTAGCGCCGCAGGCGCCTCCGCCTCCAGTGCTTCCT
GCGCTGTCGTCCCCCGGAGAGCTTGCGGCCGCGCTGCGCCACCTCCAAGCCGCGGACCCT
CTCCTCACCGCGGTCATTGCCAACACTGAGGCGCCCACCTTCACCGCCACACCCTCCCTC
CCCGCGTTCCACTCCCTCGCGCGCTCCATCCTATACCAGCAGCTCGCGACCTCCGCTGCG
GACGCCATCTACGCACGCTTCCTTGCGCTCCTCCCCTCTGCTTCGGCGGCGGCCGCAGCC
GTAGCCGCTGACGCGGTCACACCTGCCGCCGTCCTTGCCCTCGCCGCCGCTGACCTGCGT
ACCATCGGCGTATCCGGCCGCAAGGCATCCTACCTCCACGACCTCGCGGCCAGATTCGCA
GCCGGGGAGCTCTCTGACTCCGCAGTCGCCGCGATGGATGAGGCTGCGCTCCTCGCGGAG
CTCACCAAGGTCAGAGGCGTCGGCGAGTGGACTGTCCACATGTTCATGATCTTCTCGCTG
CACCGCCCCGACATTCTGCCGTGTGGCGACCTCGGTGTGCGCAAGGGCGTGCAGGAGCTG
TACAAGCTCAAGTCGCTGCCCAATCCGGAGGAGATGGCAGCATTGTGCGAGCGGTGGAGG
CCATACCGGTCAGTCGGCGCGTGGTACATGTGGCGCCTCATGGAGAGCAAGGGCGCTGCG
TCCAAGAAGAAGAATAAGGGTAATGCGAGCTCTTAG