Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039043_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:6:169160404:169166340:1 gene:Zm00001d039043 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	ATGGGAACCCGCGGCGTCGCCCTGCTGCTCCTCGCGGCGGTGCTGCTCCTCCAGGCGCTC CTCCTCGCGTCGTCGGAGGGCCTGGTGCGGGTCGCGCTGAAGAAGCTGCCCGTCGACCAG AACGGCCGCGTCGCCGCGCGCCTCTCCGCCGAGGAGAGGCAGCGCCTCCTCCTCCGCGGC GCCAACGCCCTGGGCTCAGGCGGCGACGACGACTCCGACGTCATCGCGCTCAAGAACTAC ATGAACGCGCAGTACTTTGGGGAGATCGGCGTCGGCTCGCCGCAGCAGAAGTTCACCGTC ATCTTCGACACCGGCAGTTCCAACCTCTGGGTGCCGTCCTCCAAGTGCTACTTCTCGATC GCTTGCTACTTCCACTCGCGCTACAAGTCAGGGCAGTCAAGCACTTACAAGAAGAACGGA AAACCTGCTGCCATACGCTATGGAACTGGTTCCATTGCTGGTTTTTTCAGTGAGGATAGC GTTACATTAGGTGATCTGGTTGTGAAGGATCAGGAATTTATTGAAGCTACAAAGGAGCCA GGGCTTACCTTCATGGTTGCAAAATTTGATGGCATTCTTGGGCTAGGCTTTCAAGAAATC TCTGTTGGGAATGCAACACCAGTGTGGTATAACATGGTGAAACAAGGTCTCATCAGCGAC CCTGTTTTCTCTTTCTGGTTTAACCGACATGCTGATGAAGGAGAAGGTGGTGAAATTGTG TTTGGTGGAATGGATTCTAGCCACTACAAGGGTGATCACACGTTTGTCCCAGTCACTCGG AAGGGATACTGGCAGTTCAACATGGGTGATGTCCTGGTTGATGGAAAGTCCACTGGGTTT TGTGCCGGTGGCTGTGCAGCCATCGCAGATTCTGGAACTTCCTTGCTTGCTGGCCCCACA GCCATAATTACTGAAATCAATGAAAAGATTGGTGCTGCTGGTGTAGTCAGCCAAGAGTGC AAGACTGTTGTTTCTCAATATGGACAGCAGATCCTAGATCTTTTGCTAGCTGAGACACAA CCAGCGAAGATCTGTTCTCAGGTTGGTCTGTGCACTTTTGATGGCACCCATGGTGTCAGC GCTGGAATTCGGAGCGTAGTGGATGATGAAGCTGGGAAATCAAATGGTGGTCTCAAGAGT GATCCAATGTGCAATGCTTGTGAGATGGCTGTGGTATGGATGCAGAACCAACTTGCCCAG AACAAGACACAGGAGCTCATCCTGAACTACATTAATCAGCTTTGCGAGCGTCTTCCGAGT CCGATGGGAGAATCAGCCGTGGACTGTGGCAGTCTTGCGTCCATGCCTGACATTGCGTTC ACCATTGGAGGCAAGAAGTTCAAGCTGAAACCAGAGCAGTACATTCTGAAGGTTGGTGAA GGACAGGCTGCCCAGTGCATCAGCGGATTCACAGCTATGGATATCCCACCACCCCGTGGC CCTCTCTGGATCTTGGGTGATGTTTTCATGGGAGTCTACCACACCGTCTTCGACTATGGC AAGCTGAGGGTTGGCTTCGCAGAGTCGGCCTAG

Peptide Sequence

PEP ID	Zm00001d039043_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:6:169160404:169166340:1 gene:Zm00001d039043 transcript:Zm00001d039043_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	MGTRGVALLLLAAVLLLQALLLASSEGLVRVALKKLPVDQNGRVAARLSAEERQRLLLRG ANALGSGGDDDSDVIALKNYMNAQYFGEIGVGSPQQKFTVIFDTGSSNLWVPSSKCYFSI ACYFHSRYKSGQSSTYKKNGKPAAIRYGTGSIAGFFSEDSVTLGDLVVKDQEFIEATKEP GLTFMVAKFDGILGLGFQEISVGNATPVWYNMVKQGLISDPVFSFWFNRHADEGEGGEIV FGGMDSSHYKGDHTFVPVTRKGYWQFNMGDVLVDGKSTGFCAGGCAAIADSGTSLLAGPT AIITEINEKIGAAGVVSQECKTVVSQYGQQILDLLLAETQPAKICSQVGLCTFDGTHGVS AGIRSVVDDEAGKSNGGLKSDPMCNACEMAVVWMQNQLAQNKTQELILNYINQLCERLPS PMGESAVDCGSLASMPDIAFTIGGKKFKLKPEQYILKVGEGQAAQCISGFTAMDIPPPRG PLWILGDVFMGVYHTVFDYGKLRVGFAESA

Transcript Sequence

Transcript ID	Zm00001d039043_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:169160404:169166340:1 gene:Zm00001d039043 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	GCTCCGCCTTGGGCTGCCGCAGATCAGCGAACATGGGAACCCGCGGCGTCGCCCTGCTGC TCCTCGCGGCGGTGCTGCTCCTCCAGGCGCTCCTCCTCGCGTCGTCGGAGGGCCTGGTGC GGGTCGCGCTGAAGAAGCTGCCCGTCGACCAGAACGGCCGCGTCGCCGCGCGCCTCTCCG CCGAGGAGAGGCAGCGCCTCCTCCTCCGCGGCGCCAACGCCCTGGGCTCAGGCGGCGACG ACGACTCCGACGTCATCGCGCTCAAGAACTACATGAACGCGCAGTACTTTGGGGAGATCG GCGTCGGCTCGCCGCAGCAGAAGTTCACCGTCATCTTCGACACCGGCAGTTCCAACCTCT GGGTGCCGTCCTCCAAGTGCTACTTCTCGATCGCTTGCTACTTCCACTCGCGCTACAAGT CAGGGCAGTCAAGCACTTACAAGAAGAACGGAAAACCTGCTGCCATACGCTATGGAACTG GTTCCATTGCTGGTTTTTTCAGTGAGGATAGCGTTACATTAGGTGATCTGGTTGTGAAGG ATCAGGAATTTATTGAAGCTACAAAGGAGCCAGGGCTTACCTTCATGGTTGCAAAATTTG ATGGCATTCTTGGGCTAGGCTTTCAAGAAATCTCTGTTGGGAATGCAACACCAGTGTGGT ATAACATGGTGAAACAAGGTCTCATCAGCGACCCTGTTTTCTCTTTCTGGTTTAACCGAC ATGCTGATGAAGGAGAAGGTGGTGAAATTGTGTTTGGTGGAATGGATTCTAGCCACTACA AGGGTGATCACACGTTTGTCCCAGTCACTCGGAAGGGATACTGGCAGTTCAACATGGGTG ATGTCCTGGTTGATGGAAAGTCCACTGGGTTTTGTGCCGGTGGCTGTGCAGCCATCGCAG ATTCTGGAACTTCCTTGCTTGCTGGCCCCACAGCCATAATTACTGAAATCAATGAAAAGA TTGGTGCTGCTGGTGTAGTCAGCCAAGAGTGCAAGACTGTTGTTTCTCAATATGGACAGC AGATCCTAGATCTTTTGCTAGCTGAGACACAACCAGCGAAGATCTGTTCTCAGGTTGGTC TGTGCACTTTTGATGGCACCCATGGTGTCAGCGCTGGAATTCGGAGCGTAGTGGATGATG AAGCTGGGAAATCAAATGGTGGTCTCAAGAGTGATCCAATGTGCAATGCTTGTGAGATGG CTGTGGTATGGATGCAGAACCAACTTGCCCAGAACAAGACACAGGAGCTCATCCTGAACT ACATTAATCAGCTTTGCGAGCGTCTTCCGAGTCCGATGGGAGAATCAGCCGTGGACTGTG GCAGTCTTGCGTCCATGCCTGACATTGCGTTCACCATTGGAGGCAAGAAGTTCAAGCTGA AACCAGAGCAGTACATTCTGAAGGTTGGTGAAGGACAGGCTGCCCAGTGCATCAGCGGAT TCACAGCTATGGATATCCCACCACCCCGTGGCCCTCTCTGGATCTTGGGTGATGTTTTCA TGGGAGTCTACCACACCGTCTTCGACTATGGCAAGCTGAGGGTTGGCTTCGCAGAGTCGG CCTAGGGATATGGTTTGGCAGCAACCCGTCCAGAGGCAAACGCGTAATTTGTGTGTTTAT GCGACCGGCGATGTGTGTATATATGCTACTACATGTTTAGTGATGCTTTCCGAGACCTGA GACAACGCCCGTCTGTTTTAACGTGGCGCAAGAATAATTCTGGTTCTGGATGTATTCTCC GTACACAAAGGCGTGTCTGATGCAATGGTGACCATCTTGCGGTTGCGTGTTTGAAATAGC CTTTTCGCATTCGTGGGCATTTGCGGGTGCGGGTTCCGAAAAGATTTTTTTTTGTATTTG TGGGGTATGCGGGAGGCTTTATCTTGGTTTTATCTTTTGTTTAGTTTAAGCTACGTAGGA TTTGTTTAGTTTTTAAACTCAGGCAACCTTGTCTCGTACTCCGCGTGCTCCCAGCGTCAG ATTTTGGGCATTTAGTTGGGCTGGGCTAGCCTTTGAAGCAGACAACGTATCCGTAGACCA TGCTGCGCGTGGCTCTAGAGATGTCAACGAGTGGTTGTAGTACGGGTGAATAAATACCTG TCTATGTTTATATTAAGTTATTCTGTATTTATAAAGATGGTATCTTATGTACATGTACAT GTGTGTATATATAGAATACTATCTTTTCAAATCAGATCTAACGGTGCACGATATCAGGGG TTCTATTAAACGAACCAACCAAGGATGTAGGGTTTTTTAAATATATATATATATAT