Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039040_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:169030660:169031891:1 gene:Zm00001d039040 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:light harvesting complex mesophyll7 description:Light harvesting complex mesophyll7

Sequence

ATGGCGAGCAGCACCATGGCCCTCTCCTCCACGGCCTTCGCCGGCAAGGCCGTGAACGTG
CCGTCGTCGTCCGCCTTCGGCGAGGCCCGCGTGACGATGCGCAAGACGGCGGCGAAGGCC
AAGCCAGCGGCGGCGTCCGGGAGCCCGTGGTACGGCCCCGACCGCGTGCTGTACCTGGGC
CCACTGTCCGGCGAGCCGCCGAGCTACCTGACGGGCGAGTTCCCGGGCGACTACGGCTGG
GACACCGCGGGGCTGTCGGCGGACCCGGAGACGTTCGCCAAGAACCGGGAGCTGGAGGTG
ATCCACTCCCGCTGGGCCATGCTGGGCGCGCTCGGCTGCGTCTTCCCGGAGCTTCTCGCC
CGCAACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGGCTCCCAGATCTTCAGC
GAGGGCGGGCTGGACTACCTCGGGAACCCGAGCCTCATCCACGCGCAGAGCATCCTTGCC
ATCTGGGCCTGCCAGGTCGTGCTCATGGGCGCCGTCGAGGGCTACCGCATCGCCGGCGGC
CCGCTCGGCGAGGTCGTCGACCCGCTCTACCCCGGCGGCAGCTTCGACCCGCTCGGCCTC
GCCGACGACCCCGAGGCCTTCGCCGAGCTCAAGGTCAAGGAGCTCAAGAACGGCCGCCTC
GCCATGTTCTCCATGTTCGGATTCTTCGTCCAGGCCATCGTCACCGGGAAGGGCCCGCTC
GAGAACCTCGCTGACCACATTGCCGACCCCGTCAACAACAACGCTTGGGCCTACGCCACC
AACTTCGTCCCCGGCAAGTGA

Peptide Sequence

PEP ID

Zm00001d039040_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:169030660:169031891:1 gene:Zm00001d039040 transcript:Zm00001d039040_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:light harvesting complex mesophyll7 description:Light harvesting complex mesophyll7

Sequence

MASSTMALSSTAFAGKAVNVPSSSAFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLG
PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG
PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
ENLADHIADPVNNNAWAYATNFVPGK

Transcript Sequence

Transcript ID

Zm00001d039040_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:169030660:169031891:1 gene:Zm00001d039040 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:light harvesting complex mesophyll7 description:Light harvesting complex mesophyll7

Sequence

CTGAGTCGCAGAAATATCAAACCTAGGACAGGAGACGAGGTGCCACTTCTTCAAAATCTG
AACTGTGCCATCACAAAAGAAAGAAAGAAAAAAGGAAGAGAAATCCACACCACAGCCACC
GCAAGATCCCGGGCGCCCAATCACCCTTCTCCACGGAGATTCCTAGCCTCAGCCACAGCC
CACATCTGCCTCATCGTCTCCCTGAGGCTCCCGTCGCGCCAAGTGTTCCAGCATCCCGGA
CGCACCAATGGCATCCAAGCATCAGATTTATTTTTTATTTTCTGGCAACATTCAAGATAG
AACTTGCTCGCGGCGGTGTTTCCCTCCGTCGCTTTAAATACCTTCGTCGCCTCCACAAGT
CCACAGCATCTCAAGCCACCATCGATCTGCAAGTCTCGCTACGTAGCAGTGCAATAAAAA
AAGCAGCCGCAATGGCGAGCAGCACCATGGCCCTCTCCTCCACGGCCTTCGCCGGCAAGG
CCGTGAACGTGCCGTCGTCGTCCGCCTTCGGCGAGGCCCGCGTGACGATGCGCAAGACGG
CGGCGAAGGCCAAGCCAGCGGCGGCGTCCGGGAGCCCGTGGTACGGCCCCGACCGCGTGC
TGTACCTGGGCCCACTGTCCGGCGAGCCGCCGAGCTACCTGACGGGCGAGTTCCCGGGCG
ACTACGGCTGGGACACCGCGGGGCTGTCGGCGGACCCGGAGACGTTCGCCAAGAACCGGG
AGCTGGAGGTGATCCACTCCCGCTGGGCCATGCTGGGCGCGCTCGGCTGCGTCTTCCCGG
AGCTTCTCGCCCGCAACGGCGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGGCTCCC
AGATCTTCAGCGAGGGCGGGCTGGACTACCTCGGGAACCCGAGCCTCATCCACGCGCAGA
GCATCCTTGCCATCTGGGCCTGCCAGGTCGTGCTCATGGGCGCCGTCGAGGGCTACCGCA
TCGCCGGCGGCCCGCTCGGCGAGGTCGTCGACCCGCTCTACCCCGGCGGCAGCTTCGACC
CGCTCGGCCTCGCCGACGACCCCGAGGCCTTCGCCGAGCTCAAGGTCAAGGAGCTCAAGA
ACGGCCGCCTCGCCATGTTCTCCATGTTCGGATTCTTCGTCCAGGCCATCGTCACCGGGA
AGGGCCCGCTCGAGAACCTCGCTGACCACATTGCCGACCCCGTCAACAACAACGCTTGGG
CCTACGCCACCAACTTCGTCCCCGGCAAGTGA