Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039038_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:169020979:169022727:-1 gene:Zm00001d039038 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit D
Sequence	ATGGGCTTCGACGTGGGCGTCGTCCCGTTCAACCCCGACGGCTGGGGTCCTCCTGACGTC CCGGCGATTCCGCAGTCTCTGGGGGGCGGTGCCTCCATCCCCTTCGCGCCCTTCTCCCGC TCCGACAAGCTGGGCCGCATCGCCGACTGGACGCGCAACCACGCCGGTCCCGCCGCCTAC GCCGCGGCGTCCCGGGACTCCGTATTCGACTTCACCTCCGCGGACGACTCGCTCGTCGCC GGGGCCGAGGACTCCTCGTTCCGCCTCGTCGATGCTAAGCCGCAGCCGCGGCCGCAACGG TTCGGCCCCAAGTGGCGCTTCAACCAGCGCCAGCAGCTCCCACAGCGCCAAGACGAGGAG GTGGAGGCGCGCCGCCGCTTGGCCGAGAAGGAGCGCGCACGCCGCGATCGCCACTTCCAG AACAACCGCTCACATCACCACCCTGGCTTCCGGGGCAACCAGCCCTCGTCGTCAGCCAAG CCCTCCGTCGACATCCAGCCCGACTGGACCATGCGCGAGCAGATCCCCTTCGCCAACTTC ACCAAGCTCTCCTTCTCCGTGTCCGACCAGCCCGAGGATCTCCTCTTATGCGGCGCCGTC GAGTCCTACGATCGGGCCTATGACCGTGTCAACCCCAAGGCCGCGCGCCGTCTCGAGCGC TTCAAGTCCCGCAACTTCTTCAAGGTCACCACCACCGACGACCCTGTCATCCGCCGCCTC GCTGAGGAGGACAAAGCCACGGTGTTCGCGACTGATGCCATCCTCGCCGCTCTCATGTGC ACGCCCCGCAGCATCCTATCATGGGACATTGTCGTGCAGCGTGTGGGCAACAAGCTGTTC CTTGACAAGCGTGATGGCTCCCAGCTCGACCTGCTCACTGTCAACGAGACTGCGCAGGAG CAGCTTCCTGAGAACAAGGATGACATCAACTCCGCGCACTCGCTCGCTGTTGAGGCCACC TACATCAACCAGAACTTCTCACAGCAGGTGCTGCACCGCAATGGTGAGAAGGTTAACTTT GACGAGCCCAACCCATTTGCTTCTGAGGGTGAAGAGGCTGCATCTGTTGGCTACCGCTAC CGCCGTTGGAAGTTGAATGATGAGATCAGCCTTGTTGCTCGCTGTGAGGTGCATGCTGTC AATGTTGATCCAAGTGGTACTCGCCAGTTTATTACCGTCAATGCCTTAAATGAGTTTGAT TCAAAGATTACTGGTGTTGACTGGAGGCAGAAACTTGAGACCCAGCGTGGAGCTGTCCTT GCTACAGAGCTCAAGAACAATGCCAACAAACTTGCTCGCTGGACTGCCCAGGCTTTGCTT GCTGGTGCTGACATGATGAAGTTGGGCTATGTGTCACGAGTGAACCCCCGTGATCAGTAC AACCATTCTGTGCTCACTGTGATGGGATACAAGCCAAGGGATTTTGCTGCACAGATCAAC CTCAACACTGCAAACATGTGGGGAATCGTCAAGTCAATTGTGGACATCTGCATGAAGTTT GAAGAGGGCAAGTATGTGTTTGTCAAAGATCCAGCAAAGCCACAGTTGAGGATCTATGAG GTACCATCTGATGCGTTTGAGAATGATTATGTTGAAGAGCCACTTCCAGAGGAGGAGCAG GTTCGCCCGCTTGGAGAAGTTGACGCCACTGCAGAGGAAATGGATGCAGTTGCTGAGGCA GAGGCCAACAATGTATCTTCTGCTAATGGTGGTGAGGGTGGGAAGAGTGCAGAAGCGACC CTTGCTTGA

Peptide Sequence

PEP ID	Zm00001d039038_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:169020979:169022727:-1 gene:Zm00001d039038 transcript:Zm00001d039038_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit D
Sequence	MGFDVGVVPFNPDGWGPPDVPAIPQSLGGGASIPFAPFSRSDKLGRIADWTRNHAGPAAY AAASRDSVFDFTSADDSLVAGAEDSSFRLVDAKPQPRPQRFGPKWRFNQRQQLPQRQDEE VEARRRLAEKERARRDRHFQNNRSHHHPGFRGNQPSSSAKPSVDIQPDWTMREQIPFANF TKLSFSVSDQPEDLLLCGAVESYDRAYDRVNPKAARRLERFKSRNFFKVTTTDDPVIRRL AEEDKATVFATDAILAALMCTPRSILSWDIVVQRVGNKLFLDKRDGSQLDLLTVNETAQE QLPENKDDINSAHSLAVEATYINQNFSQQVLHRNGEKVNFDEPNPFASEGEEAASVGYRY RRWKLNDEISLVARCEVHAVNVDPSGTRQFITVNALNEFDSKITGVDWRQKLETQRGAVL ATELKNNANKLARWTAQALLAGADMMKLGYVSRVNPRDQYNHSVLTVMGYKPRDFAAQIN LNTANMWGIVKSIVDICMKFEEGKYVFVKDPAKPQLRIYEVPSDAFENDYVEEPLPEEEQ VRPLGEVDATAEEMDAVAEAEANNVSSANGGEGGKSAEATLA

Transcript Sequence

Transcript ID	Zm00001d039038_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:169020979:169022727:-1 gene:Zm00001d039038 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit D
Sequence	ATGGGCTTCGACGTGGGCGTCGTCCCGTTCAACCCCGACGGCTGGGGTCCTCCTGACGTC CCGGCGATTCCGCAGTCTCTGGGGGGCGGTGCCTCCATCCCCTTCGCGCCCTTCTCCCGC TCCGACAAGCTGGGCCGCATCGCCGACTGGACGCGCAACCACGCCGGTCCCGCCGCCTAC GCCGCGGCGTCCCGGGACTCCGTATTCGACTTCACCTCCGCGGACGACTCGCTCGTCGCC GGGGCCGAGGACTCCTCGTTCCGCCTCGTCGATGCTAAGCCGCAGCCGCGGCCGCAACGG TTCGGCCCCAAGTGGCGCTTCAACCAGCGCCAGCAGCTCCCACAGCGCCAAGACGAGGAG GTGGAGGCGCGCCGCCGCTTGGCCGAGAAGGAGCGCGCACGCCGCGATCGCCACTTCCAG AACAACCGCTCACATCACCACCCTGGCTTCCGGGGCAACCAGCCCTCGTCGTCAGCCAAG CCCTCCGTCGACATCCAGCCCGACTGGACCATGCGCGAGCAGATCCCCTTCGCCAACTTC ACCAAGCTCTCCTTCTCCGTGTCCGACCAGCCCGAGGATCTCCTCTTATGCGGCGCCGTC GAGTCCTACGATCGGGCCTATGACCGTGTCAACCCCAAGGCCGCGCGCCGTCTCGAGCGC TTCAAGTCCCGCAACTTCTTCAAGGTCACCACCACCGACGACCCTGTCATCCGCCGCCTC GCTGAGGAGGACAAAGCCACGGTGTTCGCGACTGATGCCATCCTCGCCGCTCTCATGTGC ACGCCCCGCAGCATCCTATCATGGGACATTGTCGTGCAGCGTGTGGGCAACAAGCTGTTC CTTGACAAGCGTGATGGCTCCCAGCTCGACCTGCTCACTGTCAACGAGACTGCGCAGGAG CAGCTTCCTGAGAACAAGGATGACATCAACTCCGCGCACTCGCTCGCTGTTGAGGCCACC TACATCAACCAGAACTTCTCACAGCAGGTGCTGCACCGCAATGGTGAGAAGGTTAACTTT GACGAGCCCAACCCATTTGCTTCTGAGGGTGAAGAGGCTGCATCTGTTGGCTACCGCTAC CGCCGTTGGAAGTTGAATGATGAGATCAGCCTTGTTGCTCGCTGTGAGGTGCATGCTGTC AATGTTGATCCAAGTGGTACTCGCCAGTTTATTACCGTCAATGCCTTAAATGAGTTTGAT TCAAAGATTACTGGTGTTGACTGGAGGCAGAAACTTGAGACCCAGCGTGGAGCTGTCCTT GCTACAGAGCTCAAGAACAATGCCAACAAACTTGCTCGCTGGACTGCCCAGGCTTTGCTT GCTGGTGCTGACATGATGAAGTTGGGCTATGTGTCACGAGTGAACCCCCGTGATCAGTAC AACCATTCTGTGCTCACTGTGATGGGATACAAGCCAAGGGATTTTGCTGCACAGATCAAC CTCAACACTGCAAACATGTGGGGAATCGTCAAGTCAATTGTGGACATCTGCATGAAGTTT GAAGAGGGCAAGTATGTGTTTGTCAAAGATCCAGCAAAGCCACAGTTGAGGATCTATGAG GTACCATCTGATGCGTTTGAGAATGATTATGTTGAAGAGCCACTTCCAGAGGAGGAGCAG GTTCGCCCGCTTGGAGAAGTTGACGCCACTGCAGAGGAAATGGATGCAGTTGCTGAGGCA GAGGCCAACAATGTATCTTCTGCTAATGGTGGTGAGGGTGGGAAGAGTGCAGAAGCGACC CTTGCTTGA