Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039036_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:6:168999800:169005010:1 gene:Zm00001d039036 gene_biotype:protein_coding transcript_biotype:protein_coding description:16S rRNA processing protein RimM family
Sequence

ATGGCGCCTCCTACCTCTGCATCGGCGCGGCCGCTATCCCTCCCCCTCACCGTCCCTCTC
TCCTGTCACCGCTCCCACTTGCTCCCCGCGCCCAACGCTCGCCTCCTCACCCGGCGCCGC
GTCGCGCTCGCGCCGACCCGGCCTGGCGCCACGCTCCTATCCAGCCTCAGTGACGCCCGG
GAGGAGGAGGAGGATGAAAGTGGTTTCTATGAGGAGGATGAGCAACAGGAATTCGAGGAT
GAGGAGGAACAGGGGTACGACGGGGAGAACGAGGAGCTGGTCGAGGTGGGATACGTGTCA
GGCGCGCACGGGGTGCGCGGCGACGTCCTCGTCACGCCACGCACCGACTTTCCGGAGCTC
CGCCTTGCCACGCCGGGGACGAGATGGCTGAGGGCTCGAGCTGCTGGCAAGCAGCAGGTC
AGGGAATTCGAGCTTGTTCGGGGAAGGGCGCACACGGGGAAGAAGAGTTGGATCGTCAGC
TTTGATGGCGTCAACAACCTGGACGAGGCTAGGCAAATAGTTGGTTCAGCTGTACTTGTG
AAAGCTCGAGATAGACCAGAAATTGAGGATGATGAATTCTATTCACTTGACCTTGTTGGA
ATGAGAGTTATTGTCAAGGATACAGGCAAGCTCGTAGGAACAGTTGGTCAGGTTTTCAAT
TTCGGAGGTGGAGATCTTCTACAGGTGATAATGGGCTCTTCTGAGGGTACTGCTGTTGAT
CCAGATTCAGAAAATCAAGATTCAATTTCATCACGTGAGCATGTGTGGATTCCATTTGCT
GAAGATATTGTACCTGATGTTGATATGGCAAGCAGAGAAATGCGGATTACACCTCCGAAG
GGGTTACTTGAGCTCAATTCTCGTTCTGACAAGAGATCGAAGAAAGAAAGGCGTGCGATG
GAGTGGAAGGACAGGAAAAGGTTTCAACGTCGTGTAATTGCAGGAAAGAAGGTACTCTCC
GAAATGGACCAAGTCCATGTTCTGGAAGGTTTGGTATCAGGGGACAAGGTCCAAAAGGCA
TCACTTGCAGAGCAGATTGGGAGCATTGACTTTCAATTGTTCCGACATGCAGTACATTGT
GTTAGCAAGCAGATTGAGAGCTCTTCAATGAATTTGCTCGCTAACTCTTCACTGTCAAGG
AAAAAAGTGATCAAAATACCATACAAGACTCTCATCAACCTTGGGGACAAAGCTGAACAT
GCATTCAGTACTGAATTTAAAAATGGACTTGACATTCTTTTGAAGTCCAAAGCAGCTATT
GTGCTTGTTAGAAACGGCTCTGACTCTGATACTGAGTTTCTGAGTTTGCTCAATTCTTTT
AGTGAATTAATGAAGGTTGTAGAAAATAAAGTTTCTCCCCCTTTAATTGTCATTGCCCCA
GCTGGTCATGTGGAGTCAGTTCGGAAATGCCTGGTAGAGAATGACTATTTTGGTTTTGAC
ACTCAAAAGAACCATTCACAGGTGTGGGTGCTGGAAGAGGTGGAGCTTCCAGTTGTCAGT
ATATGCTCGGAGGGAAACAGAAAAAAAGTTCTGATGAAGTCTCCCTGGGAGATAATAAAA
AAGCCAACAGGTTCTGGAGCAATCTTCAGCTTACTGTTATCAAACAAAATTTTGGAAACC
CTCAATGAAATGGGTGTACAGTATACACAGATCTGCAGCTCATCCAACAAACCAATCATC
GGGCATCCTTTGCTCTTTGGGGCTGTCGCTTCCCGCGGGGCTGATGTTGGCATCCAGGTC
TCCAAGACCGGTGAAACATTAGACGATTTCGACGTGATCCTTTCCATCGACCAGCTGAAC
AAGATGTGCCGAGATGTCACCCAGATCAGGTTCTCCGCTCGCTCCGAACAGAACGTGCAC
GTCGAGCATGTCGACGGGCAGTGGGTCGCCGTCCAGCCGGAGGTGGCAAATTCCCATCGC
CTGCATGCCGAGGTTACGAGTGTCTTAGACTCTTGCGCTCCTGATAAGCTGTGTGTCATG
GAGATTGTTGAGCAATAA

Peptide Sequence

PEP ID

Zm00001d039036_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:6:168999800:169005010:1 gene:Zm00001d039036 transcript:Zm00001d039036_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:16S rRNA processing protein RimM family
Sequence

MAPPTSASARPLSLPLTVPLSCHRSHLLPAPNARLLTRRRVALAPTRPGATLLSSLSDAR
EEEEDESGFYEEDEQQEFEDEEEQGYDGENEELVEVGYVSGAHGVRGDVLVTPRTDFPEL
RLATPGTRWLRARAAGKQQVREFELVRGRAHTGKKSWIVSFDGVNNLDEARQIVGSAVLV
KARDRPEIEDDEFYSLDLVGMRVIVKDTGKLVGTVGQVFNFGGGDLLQVIMGSSEGTAVD
PDSENQDSISSREHVWIPFAEDIVPDVDMASREMRITPPKGLLELNSRSDKRSKKERRAM
EWKDRKRFQRRVIAGKKVLSEMDQVHVLEGLVSGDKVQKASLAEQIGSIDFQLFRHAVHC
VSKQIESSSMNLLANSSLSRKKVIKIPYKTLINLGDKAEHAFSTEFKNGLDILLKSKAAI
VLVRNGSDSDTEFLSLLNSFSELMKVVENKVSPPLIVIAPAGHVESVRKCLVENDYFGFD
TQKNHSQVWVLEEVELPVVSICSEGNRKKVLMKSPWEIIKKPTGSGAIFSLLLSNKILET
LNEMGVQYTQICSSSNKPIIGHPLLFGAVASRGADVGIQVSKTGETLDDFDVILSIDQLN
KMCRDVTQIRFSARSEQNVHVEHVDGQWVAVQPEVANSHRLHAEVTSVLDSCAPDKLCVM
EIVEQ

Transcript Sequence

Transcript ID

Zm00001d039036_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:168999800:169005010:1 gene:Zm00001d039036 gene_biotype:protein_coding transcript_biotype:protein_coding description:16S rRNA processing protein RimM family
Sequence

ACGGTCTGGATCCTCCTATCCAATTCCGTCTCGCGTTCCTCTCGTCGGCTCGTCGCTCTC
CGAGCCGCGAAATGGCGCCTCCTACCTCTGCATCGGCGCGGCCGCTATCCCTCCCCCTCA
CCGTCCCTCTCTCCTGTCACCGCTCCCACTTGCTCCCCGCGCCCAACGCTCGCCTCCTCA
CCCGGCGCCGCGTCGCGCTCGCGCCGACCCGGCCTGGCGCCACGCTCCTATCCAGCCTCA
GTGACGCCCGGGAGGAGGAGGAGGATGAAAGTGGTTTCTATGAGGAGGATGAGCAACAGG
AATTCGAGGATGAGGAGGAACAGGGGTACGACGGGGAGAACGAGGAGCTGGTCGAGGTGG
GATACGTGTCAGGCGCGCACGGGGTGCGCGGCGACGTCCTCGTCACGCCACGCACCGACT
TTCCGGAGCTCCGCCTTGCCACGCCGGGGACGAGATGGCTGAGGGCTCGAGCTGCTGGCA
AGCAGCAGGTCAGGGAATTCGAGCTTGTTCGGGGAAGGGCGCACACGGGGAAGAAGAGTT
GGATCGTCAGCTTTGATGGCGTCAACAACCTGGACGAGGCTAGGCAAATAGTTGGTTCAG
CTGTACTTGTGAAAGCTCGAGATAGACCAGAAATTGAGGATGATGAATTCTATTCACTTG
ACCTTGTTGGAATGAGAGTTATTGTCAAGGATACAGGCAAGCTCGTAGGAACAGTTGGTC
AGGTTTTCAATTTCGGAGGTGGAGATCTTCTACAGGTGATAATGGGCTCTTCTGAGGGTA
CTGCTGTTGATCCAGATTCAGAAAATCAAGATTCAATTTCATCACGTGAGCATGTGTGGA
TTCCATTTGCTGAAGATATTGTACCTGATGTTGATATGGCAAGCAGAGAAATGCGGATTA
CACCTCCGAAGGGGTTACTTGAGCTCAATTCTCGTTCTGACAAGAGATCGAAGAAAGAAA
GGCGTGCGATGGAGTGGAAGGACAGGAAAAGGTTTCAACGTCGTGTAATTGCAGGAAAGA
AGGTACTCTCCGAAATGGACCAAGTCCATGTTCTGGAAGGTTTGGTATCAGGGGACAAGG
TCCAAAAGGCATCACTTGCAGAGCAGATTGGGAGCATTGACTTTCAATTGTTCCGACATG
CAGTACATTGTGTTAGCAAGCAGATTGAGAGCTCTTCAATGAATTTGCTCGCTAACTCTT
CACTGTCAAGGAAAAAAGTGATCAAAATACCATACAAGACTCTCATCAACCTTGGGGACA
AAGCTGAACATGCATTCAGTACTGAATTTAAAAATGGACTTGACATTCTTTTGAAGTCCA
AAGCAGCTATTGTGCTTGTTAGAAACGGCTCTGACTCTGATACTGAGTTTCTGAGTTTGC
TCAATTCTTTTAGTGAATTAATGAAGGTTGTAGAAAATAAAGTTTCTCCCCCTTTAATTG
TCATTGCCCCAGCTGGTCATGTGGAGTCAGTTCGGAAATGCCTGGTAGAGAATGACTATT
TTGGTTTTGACACTCAAAAGAACCATTCACAGGTGTGGGTGCTGGAAGAGGTGGAGCTTC
CAGTTGTCAGTATATGCTCGGAGGGAAACAGAAAAAAAGTTCTGATGAAGTCTCCCTGGG
AGATAATAAAAAAGCCAACAGGTTCTGGAGCAATCTTCAGCTTACTGTTATCAAACAAAA
TTTTGGAAACCCTCAATGAAATGGGTGTACAGTATACACAGATCTGCAGCTCATCCAACA
AACCAATCATCGGGCATCCTTTGCTCTTTGGGGCTGTCGCTTCCCGCGGGGCTGATGTTG
GCATCCAGGTCTCCAAGACCGGTGAAACATTAGACGATTTCGACGTGATCCTTTCCATCG
ACCAGCTGAACAAGATGTGCCGAGATGTCACCCAGATCAGGTTCTCCGCTCGCTCCGAAC
AGAACGTGCACGTCGAGCATGTCGACGGGCAGTGGGTCGCCGTCCAGCCGGAGGTGGCAA
ATTCCCATCGCCTGCATGCCGAGGTTACGAGTGTCTTAGACTCTTGCGCTCCTGATAAGC
TGTGTGTCATGGAGATTGTTGAGCAATAAAAGTTTCTTGCCTGTGTACTGTACATAATCA
CAAGTACTTGATAGATGCGTGAGGTTTTTCTTCTGCTATTGTTTTGCTATGAATTTTTAG
GGGAGCATCTACGAAGGGGAATACCAGCCACCCACTGC