Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039004_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:168636264:168637959:1 gene:Zm00001d039004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 87 description:NAC87 NAC type transcription factor

Sequence

ATGACGTGGTGCAATGGCTTCAACGACGTGCGCGCCGCCGTGGAGAGCAGCCTGTCTCCG
GCCGCAGCCGCCGTGGGCAAGACGGCGGCGGCGTCGCTCGCCGTCCTGGTCAAGATGTGC
CCGTCGTGCGGCCACCGCGCGCAATATGAGCAGAAGAGCACGACGATCCAGGACTTGCCG
GGGCTGCCGGCCGGCGTGAAGTTCGACCCGACGGACCAGGAGCTGCTGGAGCACTTGGAG
GGGAAGGCGAGGCCGGACACGCGGAAGCTCCACCCCCTCGTCGACGAGTTCATCCCCACC
ATCGACGGCGAGAACGGCATCTGCTACACGCACCCGGAGAGGCTCCCCGGTGTGAGCAAG
GACGGGCTTGTTCGGCACTTCTTCCACCGGCCGTCCAGGGCGTACACGACGGGGACGAGG
AAGCGGCGGAAGGTGCACAGCGGCGACGACGGCGGCGAGACGCGGTGGCACAAGACGGGC
AAGACCAGGCCGGTGCTGTCCAACGGCAGGCCCCGCGGGTACAAGAAGATCCTGGTGCTC
TACACAAACTACGGCAAGCAGCGCAAGCCCGAGAAGACCAACTGGGTGATGCACCAGTAC
CACCTCGGCTCCGACGAGGAGGAGCGCGACGGCGAGCTCGTCGTCTCCAAGGTCTTCTTC
CAGACGCATCCTAGGCAGTGCGGCTACACCATGGCCAGGGAGTCCGCCGTCGTCGTCCCT
GCCGCCGCCGCAGTCACCGGCAGCAGCAACGCGTTTATTGCCGGCCATCACCAGAGTGGT
GGTGGTGGTAGCGTCCTCAGAGAAGCAAACGGCGGAGCTGATCAGCTCTACAGCCCAGGA
GCAATGATGGGGTATGACCAGGAGGGGCCTGGAAACAGGGCACCTCCTGCCCCTGCTGTG
GCTCCCCACTTCATGCCTAACTTTGTTGTCCATGCAGCAAGAGCTAGCTTTGGCCCTTGA

Peptide Sequence

PEP ID

Zm00001d039004_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:168636264:168637959:1 gene:Zm00001d039004 transcript:Zm00001d039004_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 87 description:NAC87 NAC type transcription factor

Sequence

MTWCNGFNDVRAAVESSLSPAAAAVGKTAAASLAVLVKMCPSCGHRAQYEQKSTTIQDLP
GLPAGVKFDPTDQELLEHLEGKARPDTRKLHPLVDEFIPTIDGENGICYTHPERLPGVSK
DGLVRHFFHRPSRAYTTGTRKRRKVHSGDDGGETRWHKTGKTRPVLSNGRPRGYKKILVL
YTNYGKQRKPEKTNWVMHQYHLGSDEEERDGELVVSKVFFQTHPRQCGYTMARESAVVVP
AAAAVTGSSNAFIAGHHQSGGGGSVLREANGGADQLYSPGAMMGYDQEGPGNRAPPAPAV
APHFMPNFVVHAARASFGP

Transcript Sequence

Transcript ID

Zm00001d039004_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:168636264:168637959:1 gene:Zm00001d039004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 87 description:NAC87 NAC type transcription factor

Sequence

GACCAACCCCCTTTGGTTGTGGTTCCCCCTCTCCGGCCGATCCCTGTCGATCGAGCCGGG
CGCTACCTCTTGTCAGCCCTTCTTTAATCGCGCGCCTGCTGTCCTCTCCTCGCTCATGGA
GACGTCGTCGTTCTAGCTAGATCAGTTACTGCCCAGCCTTAGCTAGCTAGTCGTCGTCGT
CGCCCGCCCGCGCGCGCGCTTCGCTCGTTCTTCGTTATCTATCGATCGACAAGGAAGCAG
CTAAAATTAGGGGGTTCGATCAATTCGTTGTTATGACGTGGTGCAATGGCTTCAACGACG
TGCGCGCCGCCGTGGAGAGCAGCCTGTCTCCGGCCGCAGCCGCCGTGGGCAAGACGGCGG
CGGCGTCGCTCGCCGTCCTGGTCAAGATGTGCCCGTCGTGCGGCCACCGCGCGCAATATG
AGCAGAAGAGCACGACGATCCAGGACTTGCCGGGGCTGCCGGCCGGCGTGAAGTTCGACC
CGACGGACCAGGAGCTGCTGGAGCACTTGGAGGGGAAGGCGAGGCCGGACACGCGGAAGC
TCCACCCCCTCGTCGACGAGTTCATCCCCACCATCGACGGCGAGAACGGCATCTGCTACA
CGCACCCGGAGAGGCTCCCCGGTGTGAGCAAGGACGGGCTTGTTCGGCACTTCTTCCACC
GGCCGTCCAGGGCGTACACGACGGGGACGAGGAAGCGGCGGAAGGTGCACAGCGGCGACG
ACGGCGGCGAGACGCGGTGGCACAAGACGGGCAAGACCAGGCCGGTGCTGTCCAACGGCA
GGCCCCGCGGGTACAAGAAGATCCTGGTGCTCTACACAAACTACGGCAAGCAGCGCAAGC
CCGAGAAGACCAACTGGGTGATGCACCAGTACCACCTCGGCTCCGACGAGGAGGAGCGCG
ACGGCGAGCTCGTCGTCTCCAAGGTCTTCTTCCAGACGCATCCTAGGCAGTGCGGCTACA
CCATGGCCAGGGAGTCCGCCGTCGTCGTCCCTGCCGCCGCCGCAGTCACCGGCAGCAGCA
ACGCGTTTATTGCCGGCCATCACCAGAGTGGTGGTGGTGGTAGCGTCCTCAGAGAAGCAA
ACGGCGGAGCTGATCAGCTCTACAGCCCAGGAGCAATGATGGGGTATGACCAGGAGGGGC
CTGGAAACAGGGCACCTCCTGCCCCTGCTGTGGCTCCCCACTTCATGCCTAACTTTGTTG
TCCATGCAGCAAGAGCTAGCTTTGGCCCTTGAACCGAGAATTCAGGACAAGATACAAACC
TATCAAATTTGCCAGATATAAATAGGCATTTAGGAATTAGGAGCATGTGCAAACTCCCAG
GACCTGAACACAATTCACTACTTGTGCAGTTGTGCTGGATTGTATAAAAAATGTCATGTT
CTCACCCTCTAACTTCACGTTCATTTACAAG