Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039002_T083
CDS Infomation

cds chromosome:B73_RefGen_v4:6:168612319:168621007:-1 gene:Zm00001d039002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 3 description:Putative homeodomain-like transcription factor superfamily protein

Sequence

ATGGAGTCCTCCGACGACGGGGGCTCCGGGCCGCTGCTGCTGGCGGCGGGGATGGGGAGT
CCCGGCCATTCGTTGGTCCCCGCGGCCGTCGGCGGTGCGAGTAGCGCACCTGGCGCCTCC
GGATCCGGGGGGAAGCCGCCGGTGAAGCGCGTCATGAAGACGCCCTACCAGCTGGAGGTT
CTGGAGAGGACGTATGCAGAGGATTCGTACCCAAACGAGACGAAGCGGGCGGAGCTATCG
GTGCAGTTAAACCTCACGGACAGGCAGCTGCAGATGTGGTTCTGCCACCGCCGGCTCAAG
GACCGGAAACCGCTGGCCAAGAGGCAACTGAGGGACGACGAGGTTAGCGCCCCAGTCATA
GCGCCATCACCTGTGCTTCCGCCTCCATCGCCGCCCAGCGAGATGATAGCGGGGACTGTT
GGAACCTATCGTGAGCAGCTGCCACCCTATTCCAGGAGAGGGCCTGACCGGCCATCCGTG
CCTAGGCTATCTGTGCCCGAGATTGGGAGGAGATACTACGAACCTCCACAAGTTATGCTG
CCTCACATGGCACCAGTGCACCTTACACAAGCGGAGCATCGGGTGATCAATTCTGTAGAA
GCACTTATAGGGGAGCCTTTGAGGGATGATGGGCCAGTGCTTGGTATTGAATTTGATCCA
CTTCCTCCTGGTGCATTTGGCACACCTATAGTTCCTGAGCCACCAAGGCAGCCCTTCCGA
TCATATGATACCAAGATGTTTTTTGGGCATGATTCCAAACCCATGAAGGCAGTACATGAA
TATCAATTTCTTCCTGAGCAGCCAAGTGACACATATGAGAGGGCAAGCCAGTCACACTTC
TATAATGCTCCAGCAGAGGCATCAAACTTGAGGGTAGCTCCTCTGTCTACAGGTTCACGC
TTTCTACATGGACTTGAGCAGGCACCTAGCTATACGTTTCACAGTCAATCATCTGGTTCT
AGCCATTCGGCTCATCGTGGCAGATCGCCGATTGCATTGGCATTGACAGATCATGAGGGG
GCTTTGTCAAATATTAATGTTAGCCCAACTCCAATCCATGGCAAATTTAGCATCCCTCAA
GTTGCTGGATTTGAAAGCTCCCTCGCATCCTCTGAAAGAATGGGATATCATGATGATGAT
ACATATCGTGTGGACAGAAAGCGCAAGCATAATGAGGAAGCTAAGACTGTTAGGGAGGTT
GAGGCTCATGAAAAGAGAATCAGAAAGGAGCTTGAGAAGCAAGATCTGCTGAATAGAAAG
AGAGAAGAACAAATGCAGAGGGAAACAGAGAGACTTGGTCGTGAGAGACGAAAGGAAGAG
GAGAGGTTGATGCGTGAAAGGCAGAGGGAAGAAGAGAAATTCCAAAGGGAACAAAGACGT
GCACACAAGCGTATGGAAAAGTTTATGCAGAAACAATCTATAAGAGCTGAAAAACTAAGA
CAAAAAGAGGAGCTTCGACGAGAGAAAGAAGCAGCGAAGCAGAAGGCTGCTAATGAGAGG
GCTACAGCACGTAGAATCGCGCGGGAGAGTATGGAACTGATGGAAGATGAGCGCTTAGAA
TTATTAGAACTGGCCTCTCGTAGTAAAGGGCTCCTCTCAATGGTTTCTCTTGATAGTGAC
ACATTACAGCAGCTTGATTCATTTAGAGGAATGCTGGGAAAGTTTCCTCCTGAAACTGTG
AGACTGAAGGTGCCTTTTTCAATAAAACCATGGGCAGATTCCGAGGATATTATTGGAAAC
CTTTTGATGGTTTGGAAGTTCTTTGTTACCTTTGGTGATGTTCTTGGGCTTCCATCATTC
ACATTGGATGAGTTCGTGCAGGCTCTTCATGATTATGATTCAAGGCTCTTAGGTGAATTG
CATATTGCTCTGTTGAAATCTATCATTAAAGATATTGAGGATGTTGCCCGGACTCCTTCA
GTTGCTTTAGGTGTAAATCAGAGCAGTTCTGCCAATCCTGGAGGTGGTCACCCACAAATT
GTTGAAGGGGCGTATGCTTGGGGCATCAACATACTTAACTGGCAGCACCACTTGAACTTT
CTTACATGGCCAGAAATATTGCGCCAATTTGGTTTATGTGCTGGTTTTGGGCCTCAGTTA
AAGAAAAGCAATGCTGAAATTGTCCATCACCGTGACAATAACGAGGTCCATAATGGTGTA
GATGTCATTTCCATTCTGCGAAATGGTTCAGCGGCTGTGAAGGCTGCTGCTTTAATGAAA
GAAAGAGGGTATACTAATCGCAGGTCTCGACACCGTCTGACACCTGGAACAGTAAAGTTT
GCTGCTTTCTATGTACTGTCACTTGAAGGGAGCAGAGGTCTCACGATATTGGAAGTTGCA
GAAAAGATCCAGAAATCTGGACTGAGAGACCTTACAACAAGTAAGACACCAGAGGCATCT
GTATCTGCGGCATTGTCGAGAGACACTAAGCTTTTTGAAAGAACAGCACCTTCGACATAT
TGTGTTAAAACTCCTTACAGAAAGGACCCAGATGACTCTGAGGCTGTGTTGTCAGCAGCA
CGTGAAAAAATCAGGGTTTTTCAGAATACACTTTCAGAGTGTGAAGAAGTGGAGAAGGAT
GTGGATGAGGCTGAGAGGGATGAGGATTCTGAATGTGATGATGCTACTGATGACGCTGAT
GGTGACGACGTGAATATTGAGGGCAAGGATGCCAAGTCTCCTCTAGTTGGAGCTCAATAT
GACACACAAATTACAGTAGTTGGTGATGTAAAGAAAGAATCAAACAGTGTGATGAACATA
TCAGTGCCACCAAGCATTCAAATTAAATCTAGTGCAAGTGTACCGTTGCATACTTTAGAC
AGTAAAGCAAGTAGTTCAACTGACCCACAAGTTGGAGATGATGATAAAGACACTGAGATA
GATGAAAGTAACCAAGGGGAGTCCTGGGTACAGGGGTTAGCTGAGGGTGACTATTGTGAT
CTTAGTGTGGACGAACGGCTCAATGCTTTCGTTGCGCTTATTGGTGTTGCCACAGAAGGA
AATTCTATCCGTGCAATTCTGGAGGAACGCCTAGAAGCAGCAAGTGCTTTGAAAAAACAA
ATGTGGGCTGAGGCACAACTTGATAAGAGGCGTTCAAGGGATGACTTTACTAGTAAGGTG
CAGTATGATTCTTGTGTGGGTATAAAGGTTGATACAGATCAAAAAAATAATGCTGCTGAA
AGTACACTTGTGCCAGTGGATAACCCTATTAGAAACAACAACGGAAATTCCAGTTTGACG
AACAACGATTTACTTGTTGATAAGCAGAACCAGCTTATTACTGGTGATGTATTTCAACAA
TGGAATGGTGTAAGCCAAGAATTGAGTACTAACCCCGAAAGCTTGTCTGTTCAGCAATAT
GCTTCATCTGAGAAAACTAGATCTCAGTTGAAATCTTTCATAGGTCACAAGGCAGAACAG
CTATACGTGTACAGATCGCTACCCCTTGGACAAGATCGGAGACGGAACCGGTATTGGCAG
TTTTCTGCATCTTCATCATCCTATGACCCTGGTTCGGGAAGAGTCTTTTTTGAATCTAGA
GATGGATATTGGAGGGTCATTGATTCATCTGAGGCGTTTGAAGCTTTGGTATCTTCCCTT
GATACTCGTGGCATCCGTGAGTCACATCTACACTCAATGTTGCAAAGTATCGAGCCAACT
TTTAGGGAAGCTGTTGAGAGGAAGAAGTGTGTTAGTTTAGAACACACAACTGGGTGGACT
GACAATGGAAGTAATGAAAGTCCAAACTGCAACAATGAGTTTGGAAGTCCATGCAGTACC
CTTTCTGGTGTTGCTTCTGATAATCTTATGGCATATTCAGATACTTTCAAGATAGAAATT
GGGCACAACGAAGCTGAGAAAAGTTCTATCTCGAAAAGGGCTTCTGTGTTTCTGAAATGG
ATGTGGAGAGAGTGCTACTGTCACCAATCCACGTACACCATGAAATATGGAAAGAAGCGG
TGCCCTGAGTTGATTCAATCTTGTGACCATTGCTACCAGATATACTTAGCTGAAGAACAA
CACTGTTCTTCTTGTCACAAGTCATTCAAACCCATTCACAATTTCTTGGAGCACTTATCA
CAA

Peptide Sequence

PEP ID

Zm00001d039002_P083
PEP Infomation

pep chromosome:B73_RefGen_v4:6:168612319:168621007:-1 gene:Zm00001d039002 transcript:Zm00001d039002_T083 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 3 description:Putative homeodomain-like transcription factor superfamily protein

Sequence

MESSDDGGSGPLLLAAGMGSPGHSLVPAAVGGASSAPGASGSGGKPPVKRVMKTPYQLEV
LERTYAEDSYPNETKRAELSVQLNLTDRQLQMWFCHRRLKDRKPLAKRQLRDDEVSAPVI
APSPVLPPPSPPSEMIAGTVGTYREQLPPYSRRGPDRPSVPRLSVPEIGRRYYEPPQVML
PHMAPVHLTQAEHRVINSVEALIGEPLRDDGPVLGIEFDPLPPGAFGTPIVPEPPRQPFR
SYDTKMFFGHDSKPMKAVHEYQFLPEQPSDTYERASQSHFYNAPAEASNLRVAPLSTGSR
FLHGLEQAPSYTFHSQSSGSSHSAHRGRSPIALALTDHEGALSNINVSPTPIHGKFSIPQ
VAGFESSLASSERMGYHDDDTYRVDRKRKHNEEAKTVREVEAHEKRIRKELEKQDLLNRK
REEQMQRETERLGRERRKEEERLMRERQREEEKFQREQRRAHKRMEKFMQKQSIRAEKLR
QKEELRREKEAAKQKAANERATARRIARESMELMEDERLELLELASRSKGLLSMVSLDSD
TLQQLDSFRGMLGKFPPETVRLKVPFSIKPWADSEDIIGNLLMVWKFFVTFGDVLGLPSF
TLDEFVQALHDYDSRLLGELHIALLKSIIKDIEDVARTPSVALGVNQSSSANPGGGHPQI
VEGAYAWGINILNWQHHLNFLTWPEILRQFGLCAGFGPQLKKSNAEIVHHRDNNEVHNGV
DVISILRNGSAAVKAAALMKERGYTNRRSRHRLTPGTVKFAAFYVLSLEGSRGLTILEVA
EKIQKSGLRDLTTSKTPEASVSAALSRDTKLFERTAPSTYCVKTPYRKDPDDSEAVLSAA
REKIRVFQNTLSECEEVEKDVDEAERDEDSECDDATDDADGDDVNIEGKDAKSPLVGAQY
DTQITVVGDVKKESNSVMNISVPPSIQIKSSASVPLHTLDSKASSSTDPQVGDDDKDTEI
DESNQGESWVQGLAEGDYCDLSVDERLNAFVALIGVATEGNSIRAILEERLEAASALKKQ
MWAEAQLDKRRSRDDFTSKVQYDSCVGIKVDTDQKNNAAESTLVPVDNPIRNNNGNSSLT
NNDLLVDKQNQLITGDVFQQWNGVSQELSTNPESLSVQQYASSEKTRSQLKSFIGHKAEQ
LYVYRSLPLGQDRRRNRYWQFSASSSSYDPGSGRVFFESRDGYWRVIDSSEAFEALVSSL
DTRGIRESHLHSMLQSIEPTFREAVERKKCVSLEHTTGWTDNGSNESPNCNNEFGSPCST
LSGVASDNLMAYSDTFKIEIGHNEAEKSSISKRASVFLKWMWRECYCHQSTYTMKYGKKR
CPELIQSCDHCYQIYLAEEQHCSSCHKSFKPIHNFLEHLSQ

Transcript Sequence

Transcript ID

Zm00001d039002_T083
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:168612319:168621007:-1 gene:Zm00001d039002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 3 description:Putative homeodomain-like transcription factor superfamily protein

Sequence

GGGGTGCGCCCGCCGATCCTGTTCTACTTCGCGTCTGGGCTGCGACGTTACCTACTGCCG
CCGTCACCCATTGGTGGAATTCGTGGCGCGGATCGAGCCGCGGGCTTGCTTCCGGCTCGG
TGCCTGTGTATTTATTCGCGGAAATCGCCCTAGCGTGTGATTAGGTTTGTTGTTCTTCTG
TGTGGCCTAGTCTTCGCGTGTTGTGGTTTGTTGTCCGCTGGAGGCGAATCTAGGGTTACG
GTCGTCCGGGATGGAGTCCTCCGACGACGGGGGCTCCGGGCCGCTGCTGCTGGCGGCGGG
GATGGGGAGTCCCGGCCATTCGTTGGTCCCCGCGGCCGTCGGCGGTGCGAGTAGCGCACC
TGGCGCCTCCGGATCCGGGGGGAAGCCGCCGGTGAAGCGCGTCATGAAGACGCCCTACCA
GCTGGAGGTTCTGGAGAGGACGTATGCAGAGGATTCGTACCCAAACGAGACGAAGCGGGC
GGAGCTATCGGTGCAGTTAAACCTCACGGACAGGCAGCTGCAGATGTGGTTCTGCCACCG
CCGGCTCAAGGACCGGAAACCGCTGGCCAAGAGGCAACTGAGGGACGACGAGGTTAGCGC
CCCAGTCATAGCGCCATCACCTGTGCTTCCGCCTCCATCGCCGCCCAGCGAGATGATAGC
GGGGACTGTTGGAACCTATCGTGAGCAGCTGCCACCCTATTCCAGGAGAGGGCCTGACCG
GCCATCCGTGCCTAGGCTATCTGTGCCCGAGATTGGGAGGAGATACTACGAACCTCCACA
AGTTATGCTGCCTCACATGGCACCAGTGCACCTTACACAAGCGGAGCATCGGGTGATCAA
TTCTGTAGAAGCACTTATAGGGGAGCCTTTGAGGGATGATGGGCCAGTGCTTGGTATTGA
ATTTGATCCACTTCCTCCTGGTGCATTTGGCACACCTATAGTTCCTGAGCCACCAAGGCA
GCCCTTCCGATCATATGATACCAAGATGTTTTTTGGGCATGATTCCAAACCCATGAAGGC
AGTACATGAATATCAATTTCTTCCTGAGCAGCCAAGTGACACATATGAGAGGGCAAGCCA
GTCACACTTCTATAATGCTCCAGCAGAGGCATCAAACTTGAGGGTAGCTCCTCTGTCTAC
AGGTTCACGCTTTCTACATGGACTTGAGCAGGCACCTAGCTATACGTTTCACAGTCAATC
ATCTGGTTCTAGCCATTCGGCTCATCGTGGCAGATCGCCGATTGCATTGGCATTGACAGA
TCATGAGGGGGCTTTGTCAAATATTAATGTTAGCCCAACTCCAATCCATGGCAAATTTAG
CATCCCTCAAGTTGCTGGATTTGAAAGCTCCCTCGCATCCTCTGAAAGAATGGGATATCA
TGATGATGATACATATCGTGTGGACAGAAAGCGCAAGCATAATGAGGAAGCTAAGACTGT
TAGGGAGGTTGAGGCTCATGAAAAGAGAATCAGAAAGGAGCTTGAGAAGCAAGATCTGCT
GAATAGAAAGAGAGAAGAACAAATGCAGAGGGAAACAGAGAGACTTGGTCGTGAGAGACG
AAAGGAAGAGGAGAGGTTGATGCGTGAAAGGCAGAGGGAAGAAGAGAAATTCCAAAGGGA
ACAAAGACGTGCACACAAGCGTATGGAAAAGTTTATGCAGAAACAATCTATAAGAGCTGA
AAAACTAAGACAAAAAGAGGAGCTTCGACGAGAGAAAGAAGCAGCGAAGCAGAAGGCTGC
TAATGAGAGGGCTACAGCACGTAGAATCGCGCGGGAGAGTATGGAACTGATGGAAGATGA
GCGCTTAGAATTATTAGAACTGGCCTCTCGTAGTAAAGGGCTCCTCTCAATGGTTTCTCT
TGATAGTGACACATTACAGCAGCTTGATTCATTTAGAGGAATGCTGGGAAAGTTTCCTCC
TGAAACTGTGAGACTGAAGGTGCCTTTTTCAATAAAACCATGGGCAGATTCCGAGGATAT
TATTGGAAACCTTTTGATGGTTTGGAAGTTCTTTGTTACCTTTGGTGATGTTCTTGGGCT
TCCATCATTCACATTGGATGAGTTCGTGCAGGCTCTTCATGATTATGATTCAAGGCTCTT
AGGTGAATTGCATATTGCTCTGTTGAAATCTATCATTAAAGATATTGAGGATGTTGCCCG
GACTCCTTCAGTTGCTTTAGGTGTAAATCAGAGCAGTTCTGCCAATCCTGGAGGTGGTCA
CCCACAAATTGTTGAAGGGGCGTATGCTTGGGGCATCAACATACTTAACTGGCAGCACCA
CTTGAACTTTCTTACATGGCCAGAAATATTGCGCCAATTTGGTTTATGTGCTGGTTTTGG
GCCTCAGTTAAAGAAAAGCAATGCTGAAATTGTCCATCACCGTGACAATAACGAGGTCCA
TAATGGTGTAGATGTCATTTCCATTCTGCGAAATGGTTCAGCGGCTGTGAAGGCTGCTGC
TTTAATGAAAGAAAGAGGGTATACTAATCGCAGGTCTCGACACCGTCTGACACCTGGAAC
AGTAAAGTTTGCTGCTTTCTATGTACTGTCACTTGAAGGGAGCAGAGGTCTCACGATATT
GGAAGTTGCAGAAAAGATCCAGAAATCTGGACTGAGAGACCTTACAACAAGTAAGACACC
AGAGGCATCTGTATCTGCGGCATTGTCGAGAGACACTAAGCTTTTTGAAAGAACAGCACC
TTCGACATATTGTGTTAAAACTCCTTACAGAAAGGACCCAGATGACTCTGAGGCTGTGTT
GTCAGCAGCACGTGAAAAAATCAGGGTTTTTCAGAATACACTTTCAGAGTGTGAAGAAGT
GGAGAAGGATGTGGATGAGGCTGAGAGGGATGAGGATTCTGAATGTGATGATGCTACTGA
TGACGCTGATGGTGACGACGTGAATATTGAGGGCAAGGATGCCAAGTCTCCTCTAGTTGG
AGCTCAATATGACACACAAATTACAGTAGTTGGTGATGTAAAGAAAGAATCAAACAGTGT
GATGAACATATCAGTGCCACCAAGCATTCAAATTAAATCTAGTGCAAGTGTACCGTTGCA
TACTTTAGACAGTAAAGCAAGTAGTTCAACTGACCCACAAGTTGGAGATGATGATAAAGA
CACTGAGATAGATGAAAGTAACCAAGGGGAGTCCTGGGTACAGGGGTTAGCTGAGGGTGA
CTATTGTGATCTTAGTGTGGACGAACGGCTCAATGCTTTCGTTGCGCTTATTGGTGTTGC
CACAGAAGGAAATTCTATCCGTGCAATTCTGGAGGAACGCCTAGAAGCAGCAAGTGCTTT
GAAAAAACAAATGTGGGCTGAGGCACAACTTGATAAGAGGCGTTCAAGGGATGACTTTAC
TAGTAAGGTGCAGTATGATTCTTGTGTGGGTATAAAGGTTGATACAGATCAAAAAAATAA
TGCTGCTGAAAGTACACTTGTGCCAGTGGATAACCCTATTAGAAACAACAACGGAAATTC
CAGTTTGACGAACAACGATTTACTTGTTGATAAGCAGAACCAGCTTATTACTGGTGATGT
ATTTCAACAATGGAATGGTGTAAGCCAAGAATTGAGTACTAACCCCGAAAGCTTGTCTGT
TCAGCAATATGCTTCATCTGAGAAAACTAGATCTCAGTTGAAATCTTTCATAGGTCACAA
GGCAGAACAGCTATACGTGTACAGATCGCTACCCCTTGGACAAGATCGGAGACGGAACCG
GTATTGGCAGTTTTCTGCATCTTCATCATCCTATGACCCTGGTTCGGGAAGAGTCTTTTT
TGAATCTAGAGATGGATATTGGAGGGTCATTGATTCATCTGAGGCGTTTGAAGCTTTGGT
ATCTTCCCTTGATACTCGTGGCATCCGTGAGTCACATCTACACTCAATGTTGCAAAGTAT
CGAGCCAACTTTTAGGGAAGCTGTTGAGAGGAAGAAGTGTGTTAGTTTAGAACACACAAC
TGGGTGGACTGACAATGGAAGTAATGAAAGTCCAAACTGCAACAATGAGTTTGGAAGTCC
ATGCAGTACCCTTTCTGGTGTTGCTTCTGATAATCTTATGGCATATTCAGATACTTTCAA
GATAGAAATTGGGCACAACGAAGCTGAGAAAAGTTCTATCTCGAAAAGGGCTTCTGTGTT
TCTGAAATGGATGTGGAGAGAGTGCTACTGTCACCAATCCACGTACACCATGAAATATGG
AAAGAAGCGGTGCCCTGAGTTGATTCAATCTTGTGACCATTGCTACCAGATATACTTAGC
TGAAGAACAACACTGTTCTTCTTGTCACAAGTCATTCAAACCCATTCACAATTTCTTGGA
GCACTTATCACAATG