Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038989_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:6:168300047:168303054:-1 gene:Zm00001d038989 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence	ATGGACGCGCAGGCGCAGCCTTTCACCAGGCGGGCGCTGTCCAGGAGCTGCGGGTCCAAG GGGAGCCGGCTGTCCGTTGACCATCCGCCGCCGCCGCTGGCCGGCGGCCCTTCGGCGGAC AAGGGGGTGGCAGGGAGCTCGTCCTCGCTCGCGGTGCCGCCCGAGCCGGCCCGTCGTGAG GGCCCGCCCTCAGACGCGGAGAAGGTGAGGGAGAAGTTCTCCAAGCTACTGCTGGGGGAG GACATGTCCGGCACCGGCAAAGGGGTGACCTCTGCTCTCGCCCTTTCCAACGCCATCACT AATCTTGCAGCTTCTGTGTTTGGTGAGCAGCGCCGTCTGCAGCCCATGGCCGACGACCAG AAATCGCGGTGGAAGAAGGAGGTCGACTGGCTTTTGTCCGTCGCCGACCACATTGTTGAA TTTGTTCCTTCGCAGCAGGTCGCCGAGAATGGGACCTCCGTGGAGATAATGATAACCCAG CAACGTCAAGATCTACAGATGAACATCCCCGCGCTGCGCAAGCTCGATGCGATGCTCCTT GTAAGCATGGGCATGCTCTATCTTGACCATTCACTGAACAGTTCTGACTTCAGAGGGGAA TACCTCGACAGTTTCGCGGGTAAGCAGGAGTTCTGGTATGCGTCGAAAGACGCAGATGGA CCGGGCAAGGGCAGCACGCCGAGGCAGGACGACAAATGGTGGCTCCCGACTGTCAGGGTC CCTCCTGACGGTCTGTCAGGTGCATACAGTAAATGGCTTCAGAACCAGAAGGACCTCGTT GCGCAGGTGCTCAAGGCAGCAATGGCTATCAACGCTAATGTCCTTATGGAGATGGAGGTT CCTGAATCGTACACGGAGTCGCTACCGAAGAATGGGAAGTCCACCCTTGGGGATTCAGTG TACAGACTTATAACCGACGATCATTTCGACCCTGAAGAACTGCTACGCTCCGTGGACTCG TCGGATGAACACAGCATTGTTGATCTGAAGAACAGGATCGAAGCCTCAGCAGTCATCTGG CAGAAGAAAATGACCCACAACAAGGACAGCAAATTGCCCTGGGGACATAGTCACGAGAAG CGGGGAATGTTCGAAGGGAGGGCGGAGAACGTTCTTCTCCTCATCAAGCACAGGTTTCCT GGCATTGCCCAGTCGGCGCTGGACATAAGCAAGATCCAATGCAACAAGGATGTTGGCCTT GCCATTTTGGAGAGCTACTCCAGGACTCTGGAGAGCCTGGCTTTCACGGTCATGTCTCGG ATCGAGGACGTTCTGAGCGCGGACTTGGCCGCTCGAGATCTCAGGAACACGGAATCGATG AGAATCGCCGCCAGCTTAGCTTCGGACGACACCGACAAGGTCGTCTCAGACGCTAAAGCC GAGGTAGAGAAGACGGGGAGAATGGAGCCGGTTTCGCCGGCGCTATCTGACTTGGTCGGC CCGAAGCTGACGAAGATCTCGCCAGTTGCAACCAAGAGGTTTTCGTACCTTGAGAATCTG GGTGGAACAAGAAGCCCGATAGCAAGACACTAG

Peptide Sequence

PEP ID	Zm00001d038989_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:6:168300047:168303054:-1 gene:Zm00001d038989 transcript:Zm00001d038989_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence	MDAQAQPFTRRALSRSCGSKGSRLSVDHPPPPLAGGPSADKGVAGSSSSLAVPPEPARRE GPPSDAEKVREKFSKLLLGEDMSGTGKGVTSALALSNAITNLAASVFGEQRRLQPMADDQ KSRWKKEVDWLLSVADHIVEFVPSQQVAENGTSVEIMITQQRQDLQMNIPALRKLDAMLL VSMGMLYLDHSLNSSDFRGEYLDSFAGKQEFWYASKDADGPGKGSTPRQDDKWWLPTVRV PPDGLSGAYSKWLQNQKDLVAQVLKAAMAINANVLMEMEVPESYTESLPKNGKSTLGDSV YRLITDDHFDPEELLRSVDSSDEHSIVDLKNRIEASAVIWQKKMTHNKDSKLPWGHSHEK RGMFEGRAENVLLLIKHRFPGIAQSALDISKIQCNKDVGLAILESYSRTLESLAFTVMSR IEDVLSADLAARDLRNTESMRIAASLASDDTDKVVSDAKAEVEKTGRMEPVSPALSDLVG PKLTKISPVATKRFSYLENLGGTRSPIARH

Transcript Sequence

Transcript ID	Zm00001d038989_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:168300047:168303054:-1 gene:Zm00001d038989 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence	GCCAGCAGTTCTGCTTCCTCTTCCTTCCCTCTCTCTGCCCCAGAGGCCAGACACAGCGTC CCCGAAATCTAGCCAGCCACCGCCCACCGCCTCCCTCCTCCCCGCCTCTCTCTCTTTCTC TCTCTGCGCCAAGAAAGAGAAGGCGCCACGTTGACATTGCGGATGCCGTAGCGGGGGCGC GCGCGCCAGCCATGCGCTCGTGATGATCCGGCCGTTCCAGAAGATCGGCCACGGCCTCGA AAAGGTTCTCGTCCAGGCGCCGGAGGTCGTCGTCGCCGCCGTCGTTGGCCTCGGACGGCA CGGGCGCCTGCCTCCTCGATGGACGCGCAGGCGCAGCCTTTCACCAGGCGGGCGCTGTCC AGGAGCTGCGGGTCCAAGGGGAGCCGGCTGTCCGTTGACCATCCGCCGCCGCCGCTGGCC GGCGGCCCTTCGGCGGACAAGGGGGTGGCAGGGAGCTCGTCCTCGCTCGCGGTGCCGCCC GAGCCGGCCCGTCGTGAGGGCCCGCCCTCAGACGCGGAGAAGGTGAGGGAGAAGTTCTCC AAGCTACTGCTGGGGGAGGACATGTCCGGCACCGGCAAAGGGGTGACCTCTGCTCTCGCC CTTTCCAACGCCATCACTAATCTTGCAGCTTCTGTGTTTGGTGAGCAGCGCCGTCTGCAG CCCATGGCCGACGACCAGAAATCGCGGTGGAAGAAGGAGGTCGACTGGCTTTTGTCCGTC GCCGACCACATTGTTGAATTTGTTCCTTCGCAGCAGGTCGCCGAGAATGGGACCTCCGTG GAGATAATGATAACCCAGCAACGTCAAGATCTACAGATGAACATCCCCGCGCTGCGCAAG CTCGATGCGATGCTCCTTGTAAGCATGGGCATGCTCTATCTTGACCATTCACTGAACAGT TCTGACTTCAGAGGGGAATACCTCGACAGTTTCGCGGGTAAGCAGGAGTTCTGGTATGCG TCGAAAGACGCAGATGGACCGGGCAAGGGCAGCACGCCGAGGCAGGACGACAAATGGTGG CTCCCGACTGTCAGGGTCCCTCCTGACGGTCTGTCAGGTGCATACAGTAAATGGCTTCAG AACCAGAAGGACCTCGTTGCGCAGGTGCTCAAGGCAGCAATGGCTATCAACGCTAATGTC CTTATGGAGATGGAGGTTCCTGAATCGTACACGGAGTCGCTACCGAAGAATGGGAAGTCC ACCCTTGGGGATTCAGTGTACAGACTTATAACCGACGATCATTTCGACCCTGAAGAACTG CTACGCTCCGTGGACTCGTCGGATGAACACAGCATTGTTGATCTGAAGAACAGGATCGAA GCCTCAGCAGTCATCTGGCAGAAGAAAATGACCCACAACAAGGACAGCAAATTGCCCTGG GGACATAGTCACGAGAAGCGGGGAATGTTCGAAGGGAGGGCGGAGAACGTTCTTCTCCTC ATCAAGCACAGGTTTCCTGGCATTGCCCAGTCGGCGCTGGACATAAGCAAGATCCAATGC AACAAGGATGTTGGCCTTGCCATTTTGGAGAGCTACTCCAGGACTCTGGAGAGCCTGGCT TTCACGGTCATGTCTCGGATCGAGGACGTTCTGAGCGCGGACTTGGCCGCTCGAGATCTC AGGAACACGGAATCGATGAGAATCGCCGCCAGCTTAGCTTCGGACGACACCGACAAGGTC GTCTCAGACGCTAAAGCCGAGGTAGAGAAGACGGGGAGAATGGAGCCGGTTTCGCCGGCG CTATCTGACTTGGTCGGCCCGAAGCTGACGAAGATCTCGCCAGTTGCAACCAAGAGGTTT TCGTACCTTGAGAATCTGGGTGGAACAAGAAGCCCGATAGCAAGACACTAGCTGCTGTAG GTAGGGGGTGTAGTGAGGGTAGATGGATCATGCCGTCGCAGAGCCTTCGGAAGAAGCTTT GTACATAGCATAGATGCCCACTGCGAACGTTTGTCTAACGATAATGTGACATCTAATCGA CTAATAGAGGCAGAAGTTCTTAGAGCGCAAACATTATCACCAAAACCATGCCCTGCCCTG GCTTTCATAATCACTTTATTTAACACTTTTATCTTCATTGTTCATGGCGGCCTCTTCTAA TGTCACCCTTGCTGAAAATGCTCTTCTTGAGGGCCTTCCACAAAGTTGCAAGGAAGATAA AAAACAAATGTATGCCGGGGGAGCGATGGCGCCGATTAGTTTGAACGGCAATCATGACGT CTCTCCGTAACGTCAGTGGAGCAGTACGTCAAAGAGTTCTTTTTTTTATGTAGCAGAATA AATAATAACCAGCAAGTGAAACACGG