Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038975_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:168039021:168040019:-1 gene:Zm00001d038975 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L1p/L10e family
Sequence

ATGAAGAAGCGCGCTGCGGAGGCGCGCCCGAACCTCCTCGCCGACGAGCGCGACGACATC
GTGGTCCTCCAGCTCTCGCTACGCCGCATCCCCGCCTCGCGCAGCACCAAGCCGCGCCTC
CTCCCGATGCCACATCCCGTTGTTGGGCACGACGGCGCCTCCGTCTGCGTCATCTCGGAC
GACCGCACCAAGTCGCGGTCCCCTTCCGCCTCCGACCTCCACGCGTCCATGTCGCTCCAC
CGTTTCCCCGTCTCCGAGGTCATCCCGCTCTCTACGCTCCGCACGGATTACCGCCCGTAC
GAGTCTCGGCGCCGTCTCGCAGCCTCCCACGACCTCTTCGTCGCCGACCGCGCCATCCTC
CCCCTGCTGCCGCGCGTCCTCGGGAAGGCGTTCTACTCCACCAAGAAGGCTCCGATTGGA
GTCGATTTCACCCGCATCGGATGGCCGGAGCAGGTCCGCAGGGTTCTTGGCTCTGCTTTT
CTGTACCTGCGGTCAGGGACCTGCTCGGGGATTAAGGTGGGTAGGCTGGACATGGAGGAG
GAGGATATCGTGGACAATGTGATGGCCGCGGTGGAGGAGGCTGTCGAGAAGGTGCCAAAG
AAGTGGGGCAATGTCAGGGCGCTGCATCTGAAGGCTGTGGATTCAGTTGCCCTACCAATT
TACCAGGTTGTGCCGGAGTTGGGTATGAAAATCGAGGTGCCTGAGCCTGACATTGTTGGA
TCTGGGGAGGTCATCGAAAAGAAGGCGAATGCTGGTGCCGATGGAAGAGAGGTATTTGCC
AATGTGAGTTCCAAGAGGAAGAGGAATAAGAAGGAGCAGATTGAGGAGGGTGTTGTGATG
CAGGAAGAAGTTCAGGTGGATACAGAGAAAAAGAAGAAGACGAAGAGCATCATGGTTGAT
GATAGCCAGGAGGTTGGCAAGAAGGGTAGAGTGAAGGGCAAGCGTGCTACCGAGGAGGGA
AAGAAGAGGAAGAAGAGCATAAAGGGTGATCGTCGGTAA

Peptide Sequence

PEP ID

Zm00001d038975_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:168039021:168040019:-1 gene:Zm00001d038975 transcript:Zm00001d038975_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L1p/L10e family
Sequence

MKKRAAEARPNLLADERDDIVVLQLSLRRIPASRSTKPRLLPMPHPVVGHDGASVCVISD
DRTKSRSPSASDLHASMSLHRFPVSEVIPLSTLRTDYRPYESRRRLAASHDLFVADRAIL
PLLPRVLGKAFYSTKKAPIGVDFTRIGWPEQVRRVLGSAFLYLRSGTCSGIKVGRLDMEE
EDIVDNVMAAVEEAVEKVPKKWGNVRALHLKAVDSVALPIYQVVPELGMKIEVPEPDIVG
SGEVIEKKANAGADGREVFANVSSKRKRNKKEQIEEGVVMQEEVQVDTEKKKKTKSIMVD
DSQEVGKKGRVKGKRATEEGKKRKKSIKGDRR

Transcript Sequence

Transcript ID

Zm00001d038975_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:168039021:168040019:-1 gene:Zm00001d038975 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L1p/L10e family
Sequence

ATGAAGAAGCGCGCTGCGGAGGCGCGCCCGAACCTCCTCGCCGACGAGCGCGACGACATC
GTGGTCCTCCAGCTCTCGCTACGCCGCATCCCCGCCTCGCGCAGCACCAAGCCGCGCCTC
CTCCCGATGCCACATCCCGTTGTTGGGCACGACGGCGCCTCCGTCTGCGTCATCTCGGAC
GACCGCACCAAGTCGCGGTCCCCTTCCGCCTCCGACCTCCACGCGTCCATGTCGCTCCAC
CGTTTCCCCGTCTCCGAGGTCATCCCGCTCTCTACGCTCCGCACGGATTACCGCCCGTAC
GAGTCTCGGCGCCGTCTCGCAGCCTCCCACGACCTCTTCGTCGCCGACCGCGCCATCCTC
CCCCTGCTGCCGCGCGTCCTCGGGAAGGCGTTCTACTCCACCAAGAAGGCTCCGATTGGA
GTCGATTTCACCCGCATCGGATGGCCGGAGCAGGTCCGCAGGGTTCTTGGCTCTGCTTTT
CTGTACCTGCGGTCAGGGACCTGCTCGGGGATTAAGGTGGGTAGGCTGGACATGGAGGAG
GAGGATATCGTGGACAATGTGATGGCCGCGGTGGAGGAGGCTGTCGAGAAGGTGCCAAAG
AAGTGGGGCAATGTCAGGGCGCTGCATCTGAAGGCTGTGGATTCAGTTGCCCTACCAATT
TACCAGGTTGTGCCGGAGTTGGGTATGAAAATCGAGGTGCCTGAGCCTGACATTGTTGGA
TCTGGGGAGGTCATCGAAAAGAAGGCGAATGCTGGTGCCGATGGAAGAGAGGTATTTGCC
AATGTGAGTTCCAAGAGGAAGAGGAATAAGAAGGAGCAGATTGAGGAGGGTGTTGTGATG
CAGGAAGAAGTTCAGGTGGATACAGAGAAAAAGAAGAAGACGAAGAGCATCATGGTTGAT
GATAGCCAGGAGGTTGGCAAGAAGGGTAGAGTGAAGGGCAAGCGTGCTACCGAGGAGGGA
AAGAAGAGGAAGAAGAGCATAAAGGGTGATCGTCGGTAA