Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038972_T025
CDS Infomation

cds chromosome:B73_RefGen_v4:6:168012890:168020848:-1 gene:Zm00001d038972 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ubiquitin-conjugating enzyme E2 24
Sequence

ATGGATTTGTTTACAATTGACTCGGATAGTGAGTCATATACTGGGACCAGTGACAGTGAA
GACCAAGAATGTGAATTTACATATAGTGACCATGCCCAAAACATCTTGTCCAGTCTGGAT
GAGAGCATTGGCAAGATTGATAATTTTTTGACTTTTGAAAGGGGGTTTCTGCATGGGGAT
ATAGTCTGCCCTGTTTCTGATCCCTCAGGTCAGCTGGGACGTGTTGTTGGTGTTGCAATG
TTTGTTGACTTGGAGACAAGCTCAGGTGACATAATTAAAGATGTAAACAGCAAGAAGCTA
TCAAGAGTGAGATCTTTTGTTTCCGGTGACTGCGTTGTTATGGGGCCATGGATTGGACGA
GTGATAAGAGCATTTGATCTTGTCACACTTTTATTCAGTGATGGAGCAAAGTGTGAAATC
CTGTTAAGGGATTCGGATGTACTGAAGCCCATTCCTCCTGTTCTTTTTGAAGATGCACCT
TACTTTTATTATCCTGGCCAACGTGTGAGGATAGTCGATCCGTCAGTTTCCAAGTCAGCA
ACATGGTTATGTGGATCATGGAGGCCCAGTAGAGATGATGGTATTGTCTCTCATGTCGAT
GTAGGGCTGGTGCATGTGAACTGGATCACATCTGTAACCAATGTTTGGGGAGATAAATCA
TCAAGTCCTCCAAACATTCAGGACCCAAAGAAGCTCACCTTGCTGTCATGTTTCCCTTAC
GCTAATTGGCAACTAGGTGATTGGTGTGCTCTTATGACTGACAACAATGGATGCCTCTGG
ATGGATTCTGGCAAGTCTTGTATTCTTAGTGAAGACCAGAAGTGTGACTCTCATGCACAC
ATGTATTTTGAAAGTTATGGTTCAGATTGTTCTCAAACATTTGTTGTTGCCAAGACAAAG
AGCACTGTTGATGTTCTGTGGCAGAATGGAACTGTATCTCTTGGTCTAGAACCCCAGGCA
TTACTCCCTGTGAGTACCCTTGGTGACCATGATTTTTGGCCAGGTCAATTTGTCCTAGAA
AAACTGACTGTAGAAGATGCTGCAAGATGTCCGCGAACGGCAATAGTGAGTGATGTGGAT
GCACTGGAGCGAACAGTAAATGTAAAATGGATTGGTCCAGCACATAGTGACATTGTCAGC
TATGGAAGTGACCCTGCAGTGGAGACTGTAAGTGTTTATGAGCTAGTAGAGCACCCAGAT
TTCTCCTTCTGCACTGGCGAGGTCGTTATCAGGTCAGCTATGAACATAGACAAGTCTGAA
GCAGATCCCACAAATGGGTCATTGGCAAGCAAAGAATCATTGGTTACCTCCTCTGGCTTC
TTATCATGCACCGGAAATGTACTTGGGTACAAGGACAATGGAATTGAAGTGCAATGGGCT
AATGGTGTTATATCCAAGGTGCAACATTTTGAGATAATTGGATTGGACAAGCTTCTTGAT
AATAGTTCTGTAGAATCAATGAATGAGGAACATACAATTGGTGATTCATTAGACGAGGCT
GAGCAGGAGGAATTGAACCATGAGATTGCTCTGGAGTCTACTGAAGACTGCACTGGCTCC
TTGTGCAAAGCCACTGCTTTTCTATTTCCCAAGACAGCTTTTGACTTCCTGACAAATGTG
GCTGCTAGTTTGTTTGGTATTCATGGTTCTCCATCTCCAAGCTCAGTTTTGGTAGATCCT
CGATATGAAATTGTGAAGATGGCAGAAATGCAGCCATGTGCAGAAGAAACACCAAAAGAA
GAACAGATAGTGAAGTTTGTGGCGCAGATTGACAAGCCAATTCTCTCTTCAGAAGATGCC
ATCTCAAAAAGATTCGATGTAGTCACTGACTGTTTGGATCATCATTTTGTGAAGGAAAAT
GGCCATGAAAGTGTTACAAGAGGTTGGTTGAAGAAGGTGCGACTGGAATGGAACATCCTG
CAAAATGACCTACCAGATGGTATTCATGTGAGAGTTTATGAGGAAAGGATGGATCTTCTG
AGGGCTTGCATCGTTGGGGCACCTGGAACACCTTACCATGACAATCTTTTTTTCTTCGAT
ATTTTCTTTCCTCCTGATTACCCCCATGAACCACCTTCTGTTCACTATCACTCTGGTGGT
CTCCGCCTGAATCCAAATCTGTATGAGTCGGGAAAAGTGTGCCTCAGCCTCCTGAAGACA
TGGACAGGCACTGGTAACGAAGTGTGGAATGCTGAGAGCTCAACTGTTCTTCAGCTGCTG
TTATCGCTTCAGGCCCTTGTTCTCAACGAAAAACCTTACTTCAACGAGGCGGGATACGAC
AAATTTGTGGGCAAGGCTGATGGAGAGAAGAACTCCATCACGTACAATGAGAATGCCTTC
CTTCTGTCATGCAAATCCATGATGTATGTTTTACGCAAGCCTCCAAAGCATTTTGAGACG
TTGGTCAAGGAGCATTTCACCTGCCGTGCCCCGCACATCCTGGATGCCTGCGAGGCTTAT
CTTGGGGGCGATCTCGTCGGACACGCGCACGACAAAGCATACGTAGCAGAGGACGGCAAC
AAGAACTGCTCAACCGGTTTCAAGATAATGCTTGGTAAGCTTCTGCCGAAGCTCGTTACT
GCCTTCTGTGAGGCCGGTATCACCAGCGACCGGTAA

Peptide Sequence

PEP ID

Zm00001d038972_P025
PEP Infomation

pep chromosome:B73_RefGen_v4:6:168012890:168020848:-1 gene:Zm00001d038972 transcript:Zm00001d038972_T025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ubiquitin-conjugating enzyme E2 24
Sequence

MDLFTIDSDSESYTGTSDSEDQECEFTYSDHAQNILSSLDESIGKIDNFLTFERGFLHGD
IVCPVSDPSGQLGRVVGVAMFVDLETSSGDIIKDVNSKKLSRVRSFVSGDCVVMGPWIGR
VIRAFDLVTLLFSDGAKCEILLRDSDVLKPIPPVLFEDAPYFYYPGQRVRIVDPSVSKSA
TWLCGSWRPSRDDGIVSHVDVGLVHVNWITSVTNVWGDKSSSPPNIQDPKKLTLLSCFPY
ANWQLGDWCALMTDNNGCLWMDSGKSCILSEDQKCDSHAHMYFESYGSDCSQTFVVAKTK
STVDVLWQNGTVSLGLEPQALLPVSTLGDHDFWPGQFVLEKLTVEDAARCPRTAIVSDVD
ALERTVNVKWIGPAHSDIVSYGSDPAVETVSVYELVEHPDFSFCTGEVVIRSAMNIDKSE
ADPTNGSLASKESLVTSSGFLSCTGNVLGYKDNGIEVQWANGVISKVQHFEIIGLDKLLD
NSSVESMNEEHTIGDSLDEAEQEELNHEIALESTEDCTGSLCKATAFLFPKTAFDFLTNV
AASLFGIHGSPSPSSVLVDPRYEIVKMAEMQPCAEETPKEEQIVKFVAQIDKPILSSEDA
ISKRFDVVTDCLDHHFVKENGHESVTRGWLKKVRLEWNILQNDLPDGIHVRVYEERMDLL
RACIVGAPGTPYHDNLFFFDIFFPPDYPHEPPSVHYHSGGLRLNPNLYESGKVCLSLLKT
WTGTGNEVWNAESSTVLQLLLSLQALVLNEKPYFNEAGYDKFVGKADGEKNSITYNENAF
LLSCKSMMYVLRKPPKHFETLVKEHFTCRAPHILDACEAYLGGDLVGHAHDKAYVAEDGN
KNCSTGFKIMLGKLLPKLVTAFCEAGITSDR

Transcript Sequence

Transcript ID

Zm00001d038972_T025
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:168012890:168020848:-1 gene:Zm00001d038972 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable ubiquitin-conjugating enzyme E2 24
Sequence

GGAAAGGCGAGGCCTTTGCGCTCGCGCACCGTAGAAATCGTTACCGGCACCGCCACCACG
CCCACTCGAGCAAGCCGCCGAGCACCCAGCGAGAACCTCCCACTCCTCCCAGTGGCTCTC
TGTCCTCTCGCGCCCCCTCGCGTCCTCACTGCCACTTGAAATACCGGTGGGCACACGACC
GCTCCAGTGTTCAACTGCTCCGGGCTGTGATTTGGTGCGACTTGGTGTTGTTGGTGGTGG
TGCTACACGTCTTGGCCTCTGCTTCCTCGGAGGGATTGGAGCCGTTTGAACTCAGGAGCT
TGCTGCTGGCCATGGTCCAAGGGTTAGGGGATGGATTGAGGCGTGGGGGGAGAGGAGCGC
AGTAGCTTCCTCTTCTTCTTCTTCTTCGGTGCGCGGGTCTGGGCTCTCGGGAGCGAGCAT
GGCGGCGGGTTGGGATTGCGACAGGTATGGACACCATTGCGTCAGGCTCCAAATTTGGTA
CCTGCTTTCGAGGTTCGTTTCGCGTGTTGTCGATGGGGCGCCGGCGGTTTCCCCCCTGGC
TTCACTGCCTCTTGTGCCGGCGCAGCCGCTGCTCCTCCCCGGTTCCTACCGCGGCGAACC
CCAGCCGCGTGATCGTTGTTGAGGAGCGCGAATTATTCGTGCTATGACTATATTGTTGAT
TCTTCGTAGTTGTGTTTCTGCCATGTTCCCTCGGCTATCACTGGGGTTATGCCGTTACTT
CTTTGTTGTTGATTGAAAGCGAAAGAAATATCTGGCTTCTTTGTTGGGTTTGGAGCTGTG
AGATTAGGGAAATTTGTTTGTCTTGTTTGATTGGTGTGCAGGGTACTAAGGTTTAGTTGG
GCTCCATCTTTGTTTGCTTCTAGGATGATGTAACTAGCATGGATAGATAATTGGTTGTGT
TTGATTTATTCGGAAGGTTGGCTCATTTGATGGGTTGTGTCAATTGCCATAGCTGCTTAT
GAGTGGTTATGATGCTGCCGTGTATGTGATTTCTTGTTATCTTCATGTTTACCAGGAAGA
ATCTCAATTTCCCATGTCAAGTTTACAAAATGGCACTTGTGTTAACTAAAAAAACTAGTG
GTTTCCCTGATTCAAACTTTTGTTTGTCTGATAATTTCTTCAGTTAAATAAAGTTGGAAG
TACAGGTTATTTTAGGGAATCATCCACTCTGCCTTCTTTGGTTGATTTGGTTTTTGCCTG
CCCCATCTATTGGTGAATTAGTGCTTTAGCCTGAACTTTCAGATCTTTCATTCATTATGT
CTATTTTACCTTGCAGTAGGAAAAAGGACATACCGATTGCTGTAGTTGTCATCGATCAGG
GAAATAACTTTTACATGTTTGTATATGCGTACTCTAGCAAGCAAAACTCTGTGGCCCTGT
TTGGGACAGCTGCTGCTTGTTAAAAAAGCAGCTTATCTGATAAGCTGGTAAAAAGCAGCT
TCTGCTTGTTGGCTGCTTTTAGTTCATTTTGAGAAGCAGCTGAACTGATAAGCTGCTGCA
GAAGCTGCCTGTTTGGCAGAACTTCAGCTTAAATTTGTGAAGAAGCTGAAAATAAGCTGT
GCCAAACAGGGCCTGTATCTACTGTTTCTGCTGTCATTCTGGGTAATAATCTCAATATAT
CATTGCCTAAAAAATCTTAATATATCAGGCTTCCATGTTGTTGGAATACGGTATTTTTGT
TGGTTTGAACTGTCTTTTTTATTCTTTTGGTGTCTTGGACTATACTTATTATGGTGTTTG
AGAAATAAAATGGTAAATGCAAAGGCAAAAAAGAATCTGATATGTTTGAGCATTTTTAAC
CAATAATTATTTGTTCTTAGAATCATATTTCTGATCTGCCCCATTCATTTTTACGCAACA
ACTTCTAATTTAGAGGGTTTTATCTTTTTACTGTTCATATGCCCAACAAACTTCATTAAT
GGAATTAGCCTAGTATATTGAGAAAATTAAGGGGATTTTCTACTGTATTCGTCCTTGAAA
GCCTCAATTTCCTTGATCAGCATTTTCTATGAAGCATGTAAATATTTTTGTCTCTTTGTA
GGCTTGCATGTTGCATGATATTATTTTGTAGTAAGATGCGAAAGGACTTCTAGTTGAGTT
GGTTATGTGGTCTGAGTAGCACTCCTCAGGTCCTGGGTTTGACTCCCCGTGTGAGCGAAT
TTCAGGTTGTGGTTAAAAAAAATCCCCTCGTCTGTCCCACGCCAAAGCATAGGTCTAAGA
CTCGGTCCCCATCGCGGGTTTTTTGACCTGCGTGAGAAGGTCTTCTTCTTAATATAATGC
CTGTGTGCTGTCTTACCCCCGTAGGTCGAGTTTTTTTTTATTTTGTAGTAAGATGACCAT
TTGAACTAATCTTCTCTTGCTATGGTTTCAGGGTCAGCTGATCCTAGCAATTGGACCCGA
CAGACCATTTTATTCTGTGATCTCATCATAATTGAAGCCCCCACTGATGAAAAGCTGTTA
CCTTGGTTGCTTTCTTGAGTACTGGTCACCAGATAGTAGCATGTTCTCTTCTGTGTGATT
AGGCTTGATTGTGGACTGACACTCCTGGTCACTTATCTCTTGTGATCATCCAGAGTATAT
CATCTGTCAGCTGATCTTTTCTCTATGGAATCGCTTCCCTTTATGAAAGTATCCTTGTTT
TAGGGCAAATCTCCTTTGGCAAACATTGTTCAGGGTGCATCACTTTGCTGGTTATCCTGA
GCATATTCTCCTCGTCGAATGAACTATCAGCAGCGAAGAGACTTCCAAATGATATCCATC
AGGAAATTCTCATTTAGTTTGATGGAAGTTTCATAAGGTTTCGTACCATCTGATTTGCTG
GGCAAATCTCCTTTGGCAGTACTTATTAATAGCTCTTTTGGGGGCAAATCTCCTTTGGCA
TTAGCTTTAAGATTTCTCACTGGGCAAATCTCCTTTGGCACTAGTTCTACCTTTAGTTTC
ACATCGCTCTTCGGGCAAATCTCCTTTGGCACTAAATACCAATTATATTTACTATTTTTA
GTAAATCTCCTTCCGCTGTGCGCACTAGCATCTATATCTGGGTAATTCTCCTTTGGCATT
ATCAGTCAAGTGTGCTGCCTGCCTGCACATAACTTATACGAGAATATCAAGAAGTGATTC
TGGAAGAAATACTTGGCCAGCTGGTATATTGACCTTCTGGACATCAATTTGCATATTGTT
CCTTGTTCTTGAGATTACCACGTTACCCAAGCAGCCACACCTTACTAAGAAGGGTTTGAA
ATCATGGATTTGTTTACAATTGACTCGGATAGTGAGTCATATACTGGGACCAGTGACAGT
GAAGACCAAGAATGTGAATTTACATATAGTGACCATGCCCAAAACATCTTGTCCAGTCTG
GATGAGAGCATTGGCAAGATTGATAATTTTTTGACTTTTGAAAGGGGGTTTCTGCATGGG
GATATAGTCTGCCCTGTTTCTGATCCCTCAGGTCAGCTGGGACGTGTTGTTGGTGTTGCA
ATGTTTGTTGACTTGGAGACAAGCTCAGGTGACATAATTAAAGATGTAAACAGCAAGAAG
CTATCAAGAGTGAGATCTTTTGTTTCCGGTGACTGCGTTGTTATGGGGCCATGGATTGGA
CGAGTGATAAGAGCATTTGATCTTGTCACACTTTTATTCAGTGATGGAGCAAAGTGTGAA
ATCCTGTTAAGGGATTCGGATGTACTGAAGCCCATTCCTCCTGTTCTTTTTGAAGATGCA
CCTTACTTTTATTATCCTGGCCAACGTGTGAGGATAGTCGATCCGTCAGTTTCCAAGTCA
GCAACATGGTTATGTGGATCATGGAGGCCCAGTAGAGATGATGGTATTGTCTCTCATGTC
GATGTAGGGCTGGTGCATGTGAACTGGATCACATCTGTAACCAATGTTTGGGGAGATAAA
TCATCAAGTCCTCCAAACATTCAGGACCCAAAGAAGCTCACCTTGCTGTCATGTTTCCCT
TACGCTAATTGGCAACTAGGTGATTGGTGTGCTCTTATGACTGACAACAATGGATGCCTC
TGGATGGATTCTGGCAAGTCTTGTATTCTTAGTGAAGACCAGAAGTGTGACTCTCATGCA
CACATGTATTTTGAAAGTTATGGTTCAGATTGTTCTCAAACATTTGTTGTTGCCAAGACA
AAGAGCACTGTTGATGTTCTGTGGCAGAATGGAACTGTATCTCTTGGTCTAGAACCCCAG
GCATTACTCCCTGTGAGTACCCTTGGTGACCATGATTTTTGGCCAGGTCAATTTGTCCTA
GAAAAACTGACTGTAGAAGATGCTGCAAGATGTCCGCGAACGGCAATAGTGAGTGATGTG
GATGCACTGGAGCGAACAGTAAATGTAAAATGGATTGGTCCAGCACATAGTGACATTGTC
AGCTATGGAAGTGACCCTGCAGTGGAGACTGTAAGTGTTTATGAGCTAGTAGAGCACCCA
GATTTCTCCTTCTGCACTGGCGAGGTCGTTATCAGGTCAGCTATGAACATAGACAAGTCT
GAAGCAGATCCCACAAATGGGTCATTGGCAAGCAAAGAATCATTGGTTACCTCCTCTGGC
TTCTTATCATGCACCGGAAATGTACTTGGGTACAAGGACAATGGAATTGAAGTGCAATGG
GCTAATGGTGTTATATCCAAGGTGCAACATTTTGAGATAATTGGATTGGACAAGCTTCTT
GATAATAGTTCTGTAGAATCAATGAATGAGGAACATACAATTGGTGATTCATTAGACGAG
GCTGAGCAGGAGGAATTGAACCATGAGATTGCTCTGGAGTCTACTGAAGACTGCACTGGC
TCCTTGTGCAAAGCCACTGCTTTTCTATTTCCCAAGACAGCTTTTGACTTCCTGACAAAT
GTGGCTGCTAGTTTGTTTGGTATTCATGGTTCTCCATCTCCAAGCTCAGTTTTGGTAGAT
CCTCGATATGAAATTGTGAAGATGGCAGAAATGCAGCCATGTGCAGAAGAAACACCAAAA
GAAGAACAGATAGTGAAGTTTGTGGCGCAGATTGACAAGCCAATTCTCTCTTCAGAAGAT
GCCATCTCAAAAAGATTCGATGTAGTCACTGACTGTTTGGATCATCATTTTGTGAAGGAA
AATGGCCATGAAAGTGTTACAAGAGGTTGGTTGAAGAAGGTGCGACTGGAATGGAACATC
CTGCAAAATGACCTACCAGATGGTATTCATGTGAGAGTTTATGAGGAAAGGATGGATCTT
CTGAGGGCTTGCATCGTTGGGGCACCTGGAACACCTTACCATGACAATCTTTTTTTCTTC
GATATTTTCTTTCCTCCTGATTACCCCCATGAACCACCTTCTGTTCACTATCACTCTGGT
GGTCTCCGCCTGAATCCAAATCTGTATGAGTCGGGAAAAGTGTGCCTCAGCCTCCTGAAG
ACATGGACAGGCACTGGTAACGAAGTGTGGAATGCTGAGAGCTCAACTGTTCTTCAGCTG
CTGTTATCGCTTCAGGCCCTTGTTCTCAACGAAAAACCTTACTTCAACGAGGCGGGATAC
GACAAATTTGTGGGCAAGGCTGATGGAGAGAAGAACTCCATCACGTACAATGAGAATGCC
TTCCTTCTGTCATGCAAATCCATGATGTATGTTTTACGCAAGCCTCCAAAGCATTTTGAG
ACGTTGGTCAAGGAGCATTTCACCTGCCGTGCCCCGCACATCCTGGATGCCTGCGAGGCT
TATCTTGGGGGCGATCTCGTCGGACACGCGCACGACAAAGCATACGTAGCAGAGGACGGC
AACAAGAACTGCTCAACCGGTTTCAAGATAATGCTTGGTAAGCTTCTGCCGAAGCTCGTT
ACTGCCTTCTGTGAGGCCGGTATCACCAGCGACCGGTAAAACCAGCGCAAGCCTGCTCTC
TGCTGCATCAGCAATGGAATTGGGACCCTTTATTATATTGCGCGTGTATATTCGATGCTT
GTGTATTCCAAATAAAATGGCGCCTGGTTTGTGTGTTACTTGTGCCTGTCTTGTAAATGT
GAAACAGTATATACAGATGATTGCTGAACT