Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038968_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:167937166:167939239:-1 gene:Zm00001d038968 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence

ATGGCTCTGCGCGGCAACCTGCCCGTGCTGCTCCTTTTGTTCGCCGCGGCGGCCACCGCG
AGCGGTAAGTCGGCGAGGCTCGACCTTTTCCCAGCAGCACCGGGAGCATCGGTAACCGCG
CGGGCGAGGGGCGACCGGCGCCGGCACGCGTACATCTCCGCCCAGCTCCCGTCGCGCCGG
GGCGGAAGGCAGAGGGTTGCCGCGGAAGTGGCGTCGTCGTCCGCGGTCTCCTTGCCTATG
TCGTCGGGGGCCTACGCAGGCACAGGGCAGTACTTTGTGAAGGTCCTCGTGGGAACGCCC
GCGCAGGAGTTCACGCTGGTAGCGGACACCGGCAGCGAGCTCACCTGGGTCAAATGCGCC
GGTGGCGCCTCCCCGCCGGGTCTCGTGTTCCGGCCAGAGGCCTCCAAGTCGTGGGCGCCC
GTCCCGTGCTCGTCCGACACGTGCAAGTTGGACGTGCCCTTCTCCCTCGCCAACTGCTCC
TCGTCGGCCAGCCCATGCTCCTACGATTACCGGTACAAGGAAGGATCGGCTGGGGCGCTC
GGCGTCGTGGGCACCGACTCGGCGACCATCGCGCTGCCCGGCGGCAAGGTGGCGCAGCTG
CAAGACGTGGTCCTGGGTTGCTCCTCCACGCATGATGGCCAGAGCTTCAAGTCAGTAGAC
GGCGTGCTGAGCCTGGGCAACGCCAAGATCTCGTTCGCGTCCCGCGCCGCCGCGCGCTTC
GGTGGTAGCTTCTCCTACTGCCTCGTCGACCACCTCGCCCCGCGCAACGCCACCGGGTAC
CTCGCCTTCGGCCCAGGGCAGGTGCCCCGGACCCCGGCGACGCAGACGAAGCTGTTCCTG
GACCCCGCGATGCCCTTCTACGGCGTGAAGGTCGACGCCGTCCACGTGGCCGGCCAGGCC
CTCGACATCCCCGCCGAGGTGTGGGACCCCAAGAGCGGCGGCGTGATCCTCGACTCCGGC
ACGACCCTCACGGTCCTCGCCACCCCGGCGTACAAGGCCGTGGTCGCCGCGCTGACCAAG
CTCCTGGCCGGGGTCCCCAAAGTGGACTTCCCCCCGTTCGAGCACTGCTACAACTGGACG
GCACCGCGACCGGGAGCGCCGGAGATCCCAAAGCTGGCGGTGCAGTTCACCGGGTGCGCG
CGGCTGGAGCCACCGGCGAAGAGCTACGTGATCGACGTGAAACCTGGCGTGAAGTGCATC
GGCTTGCAGGAGGGCGAGTGGCCCGGCGTGTCGGTCATCGGCAACATCATGCAGCAAGAG
CACCTCTGGGAATTCGACCTCAAGAACATGGAGGTCAGGTTCATGCCGTCGACCTGCACC
CGGTGA

Peptide Sequence

PEP ID

Zm00001d038968_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:167937166:167939239:-1 gene:Zm00001d038968 transcript:Zm00001d038968_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence

MALRGNLPVLLLLFAAAATASGKSARLDLFPAAPGASVTARARGDRRRHAYISAQLPSRR
GGRQRVAAEVASSSAVSLPMSSGAYAGTGQYFVKVLVGTPAQEFTLVADTGSELTWVKCA
GGASPPGLVFRPEASKSWAPVPCSSDTCKLDVPFSLANCSSSASPCSYDYRYKEGSAGAL
GVVGTDSATIALPGGKVAQLQDVVLGCSSTHDGQSFKSVDGVLSLGNAKISFASRAAARF
GGSFSYCLVDHLAPRNATGYLAFGPGQVPRTPATQTKLFLDPAMPFYGVKVDAVHVAGQA
LDIPAEVWDPKSGGVILDSGTTLTVLATPAYKAVVAALTKLLAGVPKVDFPPFEHCYNWT
APRPGAPEIPKLAVQFTGCARLEPPAKSYVIDVKPGVKCIGLQEGEWPGVSVIGNIMQQE
HLWEFDLKNMEVRFMPSTCTR

Transcript Sequence

Transcript ID

Zm00001d038968_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:167937166:167939239:-1 gene:Zm00001d038968 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic aspartyl protease family protein
Sequence

GAATTGATGCTGCCATCTGCCATTGCCATTGTGTGAGGGAGACGACGTGAAAGGAGACCA
AGGGCCACGAGATGGCTCTGCGCGGCAACCTGCCCGTGCTGCTCCTTTTGTTCGCCGCGG
CGGCCACCGCGAGCGGTAAGTCGGCGAGGCTCGACCTTTTCCCAGCAGCACCGGGAGCAT
CGGTAACCGCGCGGGCGAGGGGCGACCGGCGCCGGCACGCGTACATCTCCGCCCAGCTCC
CGTCGCGCCGGGGCGGAAGGCAGAGGGTTGCCGCGGAAGTGGCGTCGTCGTCCGCGGTCT
CCTTGCCTATGTCGTCGGGGGCCTACGCAGGCACAGGGCAGTACTTTGTGAAGGTCCTCG
TGGGAACGCCCGCGCAGGAGTTCACGCTGGTAGCGGACACCGGCAGCGAGCTCACCTGGG
TCAAATGCGCCGGTGGCGCCTCCCCGCCGGGTCTCGTGTTCCGGCCAGAGGCCTCCAAGT
CGTGGGCGCCCGTCCCGTGCTCGTCCGACACGTGCAAGTTGGACGTGCCCTTCTCCCTCG
CCAACTGCTCCTCGTCGGCCAGCCCATGCTCCTACGATTACCGGTACAAGGAAGGATCGG
CTGGGGCGCTCGGCGTCGTGGGCACCGACTCGGCGACCATCGCGCTGCCCGGCGGCAAGG
TGGCGCAGCTGCAAGACGTGGTCCTGGGTTGCTCCTCCACGCATGATGGCCAGAGCTTCA
AGTCAGTAGACGGCGTGCTGAGCCTGGGCAACGCCAAGATCTCGTTCGCGTCCCGCGCCG
CCGCGCGCTTCGGTGGTAGCTTCTCCTACTGCCTCGTCGACCACCTCGCCCCGCGCAACG
CCACCGGGTACCTCGCCTTCGGCCCAGGGCAGGTGCCCCGGACCCCGGCGACGCAGACGA
AGCTGTTCCTGGACCCCGCGATGCCCTTCTACGGCGTGAAGGTCGACGCCGTCCACGTGG
CCGGCCAGGCCCTCGACATCCCCGCCGAGGTGTGGGACCCCAAGAGCGGCGGCGTGATCC
TCGACTCCGGCACGACCCTCACGGTCCTCGCCACCCCGGCGTACAAGGCCGTGGTCGCCG
CGCTGACCAAGCTCCTGGCCGGGGTCCCCAAAGTGGACTTCCCCCCGTTCGAGCACTGCT
ACAACTGGACGGCACCGCGACCGGGAGCGCCGGAGATCCCAAAGCTGGCGGTGCAGTTCA
CCGGGTGCGCGCGGCTGGAGCCACCGGCGAAGAGCTACGTGATCGACGTGAAACCTGGCG
TGAAGTGCATCGGCTTGCAGGAGGGCGAGTGGCCCGGCGTGTCGGTCATCGGCAACATCA
TGCAGCAAGAGCACCTCTGGGAATTCGACCTCAAGAACATGGAGGTCAGGTTCATGCCGT
CGACCTGCACCCGGTGATCGTAAAGCTGACCTCGATGGTTTTGTTGATCAGAGCATTTGA
AGGGAAATGTTTTTTCTGAACATAAAAAAATAGAAAACGAAAATGATGCTCTGCATAAAT
CAACTTTCTGCACGAGATACATATTGATATTCTGCGCGATTTGCTATCCTTGCATCGAAC
CTAGTACAGTACGCGCTTGACCGCAATGTATCGGTGTCACCCATCAACAACTTATATTAT
CATACAAAGCCATCACTACCGGAATCCGGGTCTTTGCCAAGTGTCGGCGGCTTTGCCGAG
TGCTTTTTATCGGGCACTCGGCAAAGACGCCTTTGCCGAGCGCCGCACTCGGCAAAGTCC
TATACTCGGTAAAGATCTGATTTACCGAGTGTAGGACACTTGGCACAGCCAAGCACTCGG
CAAAGACTGCTTTGCCGAGAGTCAAACACTCGGCAAAGATGGCTCTCGGCAAAGGGCCGT
TAGCGACCGTCTATAGCTGATGGTCGTCCGTCTTTGCCGAGTGCCAAATATTGGGTACTC
GGCAAAGGACGCTTTGCCGAGTGTCTTCTCTAGACACTCGGTAAAGTATATTTTTATTTT