Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038944_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:6:167398568:167401412:1 gene:Zm00001d038944 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

ATGTGTGCCATCAACCTGTTCCGGGCGTTCCCTCCGAGTTGCAGATCTGGCTCATCAGGT
GGTGGTGAGGGCGACGAGGAAGAGCCAATGTTCGACCCCGCGTGGTGCCACCTGCAGCTT
GTTTATGAGCTGCTGCTGAAATTTATCGGATCCTCGTCCTTGGACGCGAAGGTAGGGAAG
AAGCACTTTGATCACTCATTCATCGTGAAGCTCCTTAATCTTCTTGACTCCGAGGATCCA
AGAGAGAGGGATTGCTTGAAAACTATTCTGCACAGGGTATATGGGAAGTTCATGGTACAC
CGTCCTTTCATCCGCAAAGCAGTGAGCAACATATTTTACCAGTTTGTCTTTGAGACTGAT
CGGCACAATGGGATCGCGGAGCTGCTGGAGGTCTTTGGCAGTGTCATTAGTGGGTTTGCA
TTGCCTCTGAAAGAAGAACACAAGATCTTTCTTTGGAGAGTTCTGATTCCTTTACACAAA
CCAAAATCTGTTGGTGTGTATCTTCAGCAGTTGACCTACTGTGTAACACAGTTTCTGGAA
AAGGACCCAAAGCTTGCAAGCTCAGTGATAATTGGTTTGTTAAGATATTGGCCGATAACA
AACTGTCAGAAGGAAGTGATGTTTCTCAGTGAGATTGAAGAGATCTTGGAGTCTACCAGC
CAAGCAGAATTTCAGAAATGTATGGTACCGTTGTTTCGGCGAATTGCTCATTGTATTACC
AGTTCCCACTTCCAGGTTGCTGAAAGAGCGCTCTTCGTATGGAACAATGATCACATTATC
AGCTTGATTGCACAAAACCGCCAAGTGATCATGCCTCTTGTCATTCCAGCGCTAGAGCAA
AACATTCAGAATCACTGGAACCAGGCGGTCCTGAATCTGACCGTGAATGTCAAGAAAATG
TTATCTGAGATGGACGACGATCTCTTCTCGTCATGCCTGGCGAAGTACAAGGACGAAGAA
GAAAAACGCGTGTCGCTAGAAGCGAAGCGTAGACTTACGTGGGAGAAGCTCGAGTCAGCT
GCAGCTTTCCAGCCAGTGACTGGCCATACAGCCGTCCTAGTAGGCCACCGGCCGTCAGCA
AATCTGATCGCCACCATGATCTAG

Peptide Sequence

PEP ID

Zm00001d038944_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:6:167398568:167401412:1 gene:Zm00001d038944 transcript:Zm00001d038944_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

MCAINLFRAFPPSCRSGSSGGGEGDEEEPMFDPAWCHLQLVYELLLKFIGSSSLDAKVGK
KHFDHSFIVKLLNLLDSEDPRERDCLKTILHRVYGKFMVHRPFIRKAVSNIFYQFVFETD
RHNGIAELLEVFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSVGVYLQQLTYCVTQFLE
KDPKLASSVIIGLLRYWPITNCQKEVMFLSEIEEILESTSQAEFQKCMVPLFRRIAHCIT
SSHFQVAERALFVWNNDHIISLIAQNRQVIMPLVIPALEQNIQNHWNQAVLNLTVNVKKM
LSEMDDDLFSSCLAKYKDEEEKRVSLEAKRRLTWEKLESAAAFQPVTGHTAVLVGHRPSA
NLIATMI

Transcript Sequence

Transcript ID

Zm00001d038944_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:167398568:167401412:1 gene:Zm00001d038944 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

GGTTCCCAATGCCTCCCATGCTCGCCGTCGCCCCGTGCTAGCTCCTCTCCCGTCTCCGCT
TCCTCCACCTGCCGCGCCAGCGCCACGCCGCCTGGATCCGGCGAGCGCGTGGCCGGGAGC
CTCAGATCCGAGCGAAACCCATCGCGGCCTGCTCTAGGATGTGTGCCATCAACCTGTTCC
GGGCGTTCCCTCCGAGTTGCAGATCTGGCTCATCAGGTGGTGGTGAGGGCGACGAGGAAG
AGCCAATGTTCGACCCCGCGTGGTGCCACCTGCAGCTTGTTTATGAGCTGCTGCTGAAAT
TTATCGGATCCTCGTCCTTGGACGCGAAGGTAGGGAAGAAGCACTTTGATCACTCATTCA
TCGTGAAGCTCCTTAATCTTCTTGACTCCGAGGATCCAAGAGAGAGGGATTGCTTGAAAA
CTATTCTGCACAGGGTATATGGGAAGTTCATGGTACACCGTCCTTTCATCCGCAAAGCAG
TGAGCAACATATTTTACCAGTTTGTCTTTGAGACTGATCGGCACAATGGGATCGCGGAGC
TGCTGGAGGTCTTTGGCAGTGTCATTAGTGGGTTTGCATTGCCTCTGAAAGAAGAACACA
AGATCTTTCTTTGGAGAGTTCTGATTCCTTTACACAAACCAAAATCTGTTGGTGTGTATC
TTCAGCAGTTGACCTACTGTGTAACACAGTTTCTGGAAAAGGACCCAAAGCTTGCAAGCT
CAGTGATAATTGGTTTGTTAAGATATTGGCCGATAACAAACTGTCAGAAGGAAGTGATGT
TTCTCAGTGAGATTGAAGAGATCTTGGAGTCTACCAGCCAAGCAGAATTTCAGAAATGTA
TGGTACCGTTGTTTCGGCGAATTGCTCATTGTATTACCAGTTCCCACTTCCAGGTTGCTG
AAAGAGCGCTCTTCGTATGGAACAATGATCACATTATCAGCTTGATTGCACAAAACCGCC
AAGTGATCATGCCTCTTGTCATTCCAGCGCTAGAGCAAAACATTCAGAATCACTGGAACC
AGGCGGTCCTGAATCTGACCGTGAATGTCAAGAAAATGTTATCTGAGATGGACGACGATC
TCTTCTCGTCATGCCTGGCGAAGTACAAGGACGAAGAAGAAAAACGCGTGTCGCTAGAAG
CGAAGCGTAGACTTACGTGGGAGAAGCTCGAGTCAGCTGCAGCTTTCCAGCCAGTGACTG
GCCATACAGCCGTCCTAGTAGGCCACCGGCCGTCAGCAAATCTGATCGCCACCATGATCT
AGCTCATGCATGTATGCCGAACAAGCGAATGTGGTGCTCTCCCCCCCTTTTGGTGAGGCG
CAGCAAGTGTAGTGTTCTCTATTTTGCTCCTGCTTATTATTATTTTCCTTTTGCTGGTAT
GGGTAATCAGTGTAGTAGTAAGTTGTAACTATTTCCGGATGTTTATGTTCTTAAGGCAAG
GATACCTGTAACTTAAGACTGCCGAGTGCTGACACTCTACATGTATCTTTGCCTGTTTAT
GGATGAACAGGTGTCCTACAGTTTAAT