Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038944_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:6:167398568:167401408:1 gene:Zm00001d038944 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

ATGTGGAAGCAGCTCCTCAGCAAGCTGCCCCGGAAGTCGCCGGCCTGCGGGGATTCGGGC
CAGTGCAGCAATGGCACCGGTATACAGCGCACGAGCAGCTGCGGGAGCATCCCGCCCGGC
CGCCCGGCCTCCGCCATCCGGCGCATGTCATCCGCCGTCTTCCCCTCGAGTGTCGTGGCC
GGTATCGAGCCGCTGGTCTCGTTCAAGGATGTCCCCAACTCGGAGAAGCAGAACCTGTTC
GTCAGCAAGCTGAGCCTGTGCTGCGTCGTCTTCGATTTCTCGGACCCGAACAAGAGCTCA
GTGGAGAAGGATATCAAGAGGCAGGCATTGCTGGATCTTATAGAGTTTGTCGAGTCGACC
AACGCTCGCTTCTCGGAGGCAGCCATCGCGGCCTGCTCTAGGATGTGTGCCATCAACCTG
TTCCGGGCGTTCCCTCCGAGTTGCAGATCTGGCTCATCAGGTGGTGGTGAGGGCGACGAG
GAAGAGCCAATGTTCGACCCCGCGTGGTGCCACCTGCAGCTTGTTTATGAGCTGCTGCTG
AAATTTATCGGATCCTCGTCCTTGGACGCGAAGGTAGGGAAGAAGCACTTTGATCACTCA
TTCATCGTGAAGCTCCTTAATCTTCTTGACTCCGAGGATCCAAGAGAGAGGGATTGCTTG
AAAACTATTCTGCACAGGGTATATGGGAAGTTCATGGTACACCGTCCTTTCATCCGCAAA
GCAGTGAGCAACATATTTTACCAGTTTGTCTTTGAGACTGATCGGCACAATGGGATCGCG
GAGCTGCTGGAGGTCTTTGGCAGTGTCATTAGTGGGTTTGCATTGCCTCTGAAAGAAGAA
CACAAGATCTTTCTTTGGAGAGTTCTGATTCCTTTACACAAACCAAAATCTGTTGGTGTG
TATCTTCAGCAGTTGACCTACTGTGTAACACAGTTTCTGGAAAAGGACCCAAAGCTTGCA
AGCTCAGTGATAATTGGTTTGTTAAGATATTGGCCGATAACAAACTGTCAGAAGGAAGTG
ATGTTTCTCAGTGAGATTGAAGAGATCTTGGAGTCTACCAGCCAAGCAGAATTTCAGAAA
TGTATGGTACCGTTGTTTCGGCGAATTGCTCATTGTATTACCAGTTCCCACTTCCAGGTT
GCTGAAAGAGCGCTCTTCGTATGGAACAATGATCACATTATCAGCTTGATTGCACAAAAC
CGCCAAGTGATCATGCCTCTTGTCATTCCAGCGCTAGAGCAAAACATTCAGAATCACTGG
AACCAGGCGGTCCTGAATCTGACCGTGAATGTCAAGAAAATGTTATCTGAGATGGACGAC
GATCTCTTCTCGTCATGCCTGGCGAAGTACAAGGACGAAGAAGAAAAACGCGTGTCGCTA
GAAGCGAAGCGTAGACTTACGTGGGAGAAGCTCGAGTCAGCTGCAGCTTTCCAGCCAGTG
ACTGGCCATACAGCCGTCCTAGTAGGCCACCGGCCGTCAGCAAATCTGATCGCCACCATG
ATCTAG

Peptide Sequence

PEP ID

Zm00001d038944_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:6:167398568:167401408:1 gene:Zm00001d038944 transcript:Zm00001d038944_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

MWKQLLSKLPRKSPACGDSGQCSNGTGIQRTSSCGSIPPGRPASAIRRMSSAVFPSSVVA
GIEPLVSFKDVPNSEKQNLFVSKLSLCCVVFDFSDPNKSSVEKDIKRQALLDLIEFVEST
NARFSEAAIAACSRMCAINLFRAFPPSCRSGSSGGGEGDEEEPMFDPAWCHLQLVYELLL
KFIGSSSLDAKVGKKHFDHSFIVKLLNLLDSEDPRERDCLKTILHRVYGKFMVHRPFIRK
AVSNIFYQFVFETDRHNGIAELLEVFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSVGV
YLQQLTYCVTQFLEKDPKLASSVIIGLLRYWPITNCQKEVMFLSEIEEILESTSQAEFQK
CMVPLFRRIAHCITSSHFQVAERALFVWNNDHIISLIAQNRQVIMPLVIPALEQNIQNHW
NQAVLNLTVNVKKMLSEMDDDLFSSCLAKYKDEEEKRVSLEAKRRLTWEKLESAAAFQPV
TGHTAVLVGHRPSANLIATMI

Transcript Sequence

Transcript ID

Zm00001d038944_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:167398568:167401408:1 gene:Zm00001d038944 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

GGTTCCCAATGCCTCCCATGCTCGCCGTCGCCCCGTGCTAGCTCCTCTCCCGTCTCCGCT
TCCTCCACCTGCCGCGCCAGCGCCACGCCGCCTGGATCCGGCGAGCGCGTGGCCGGGAGC
CTCAGATCCGAGCGAAACCCAGCCTTCCCGTGGTGACGGCCTTCGCTCTAGCTCCAGATT
GGCTGGCGGCTGCCATTCCTCCTCCTCCTCTTCTCGCTCGAGGTTTCAAGGCGGGTCCGT
TCAGCTCTGGTGCTGGCGTGACAGTGGAAAGGCTTACTGTTGCCATGGTATTGGTGTGAC
GAACCCGTCAAGGTTTTGCGCAAGATGTGGAAGCAGCTCCTCAGCAAGCTGCCCCGGAAG
TCGCCGGCCTGCGGGGATTCGGGCCAGTGCAGCAATGGCACCGGTATACAGCGCACGAGC
AGCTGCGGGAGCATCCCGCCCGGCCGCCCGGCCTCCGCCATCCGGCGCATGTCATCCGCC
GTCTTCCCCTCGAGTGTCGTGGCCGGTATCGAGCCGCTGGTCTCGTTCAAGGATGTCCCC
AACTCGGAGAAGCAGAACCTGTTCGTCAGCAAGCTGAGCCTGTGCTGCGTCGTCTTCGAT
TTCTCGGACCCGAACAAGAGCTCAGTGGAGAAGGATATCAAGAGGCAGGCATTGCTGGAT
CTTATAGAGTTTGTCGAGTCGACCAACGCTCGCTTCTCGGAGGCAGCCATCGCGGCCTGC
TCTAGGATGTGTGCCATCAACCTGTTCCGGGCGTTCCCTCCGAGTTGCAGATCTGGCTCA
TCAGGTGGTGGTGAGGGCGACGAGGAAGAGCCAATGTTCGACCCCGCGTGGTGCCACCTG
CAGCTTGTTTATGAGCTGCTGCTGAAATTTATCGGATCCTCGTCCTTGGACGCGAAGGTA
GGGAAGAAGCACTTTGATCACTCATTCATCGTGAAGCTCCTTAATCTTCTTGACTCCGAG
GATCCAAGAGAGAGGGATTGCTTGAAAACTATTCTGCACAGGGTATATGGGAAGTTCATG
GTACACCGTCCTTTCATCCGCAAAGCAGTGAGCAACATATTTTACCAGTTTGTCTTTGAG
ACTGATCGGCACAATGGGATCGCGGAGCTGCTGGAGGTCTTTGGCAGTGTCATTAGTGGG
TTTGCATTGCCTCTGAAAGAAGAACACAAGATCTTTCTTTGGAGAGTTCTGATTCCTTTA
CACAAACCAAAATCTGTTGGTGTGTATCTTCAGCAGTTGACCTACTGTGTAACACAGTTT
CTGGAAAAGGACCCAAAGCTTGCAAGCTCAGTGATAATTGGTTTGTTAAGATATTGGCCG
ATAACAAACTGTCAGAAGGAAGTGATGTTTCTCAGTGAGATTGAAGAGATCTTGGAGTCT
ACCAGCCAAGCAGAATTTCAGAAATGTATGGTACCGTTGTTTCGGCGAATTGCTCATTGT
ATTACCAGTTCCCACTTCCAGGTTGCTGAAAGAGCGCTCTTCGTATGGAACAATGATCAC
ATTATCAGCTTGATTGCACAAAACCGCCAAGTGATCATGCCTCTTGTCATTCCAGCGCTA
GAGCAAAACATTCAGAATCACTGGAACCAGGCGGTCCTGAATCTGACCGTGAATGTCAAG
AAAATGTTATCTGAGATGGACGACGATCTCTTCTCGTCATGCCTGGCGAAGTACAAGGAC
GAAGAAGAAAAACGCGTGTCGCTAGAAGCGAAGCGTAGACTTACGTGGGAGAAGCTCGAG
TCAGCTGCAGCTTTCCAGCCAGTGACTGGCCATACAGCCGTCCTAGTAGGCCACCGGCCG
TCAGCAAATCTGATCGCCACCATGATCTAGCTCATGCATGTATGCCGAACAAGCGAATGT
GGTGCTCTCCCCCCCTTTTGGTGAGGCGCAGCAAGTGTAGTGTTCTCTATTTTGCTCCTG
CTTATTATTATTTTCCTTTTGCTGGTATGGGTAATCAGTGTAGTAGTAAGTTGTAACTAT
TTCCGGATGTTTATGTTCTTAAGGCAAGGATACCTGTAACTTAAGACTGCCGAGTGCTGA
CACTCTACATGTATCTTTGCCTGTTTATGGATGAACAGGTGTCCTACAGTT