Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038904_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:166755499:166757076:1 gene:Zm00001d038904 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine synthase 1 chloroplastic
Sequence	ATGGCGGCGACAACCCACGCCGCCTCCATGTCGTTCCTCCTCTCTCACCCCCAGTCGCGC TCTGCCACCCCAAGCCGCCACCTCCCGCTCCGTCCGGCAGCCCGCCGCGTCCAGTGCGCC ACCGACGCCGCCGCCCTTTCCCCGGCGGTCACCACCAAGCACCGGCGCGCGGCGGATGAG AACATCCGCGAGGAGGCGGCGCGGCACCCGGCCCCGAAGCAGGGCCTGTCGGCGTGGTAC GAGCCCTTCCCGCCGGCCCCGAACGGCGACCCCAACGAGCGCTACTCCCTGGACGAGATC GTGTACCGGTCCAGCTCGGGGGGCCTCCTCGACGTGCGGCACGACATGGAGGCGCTGTCC CGCTTCTCGGGCGCCTACTGGCGCGACCTCTTCGACTCCCGCATCGGGCGCACCACCTGG CCGTACGGGTCCGGCGTGTGGTCCAAGAAGGAGTTCGTGCTCCCCGAGATCGAGCCCGAC CACATCGTCTCCCTGTTCGAGGGCAACTCGAACCTGTTCTGGGCCGAGCGGCTGGGGCGC GACCACCTCGGCGGGATGAACGACCTGTGGGTGAAGCACTGCGGCATCTCCCACACGGGG TCGTTCAAGGACCTCGGCATGACCGTGCTGGTGAGCCAGGTGAACCGGCTCCGCCGCGCG CCGCTGTCGCGCCCCATCGCCGGCGTCGGGTGCGCGTCCACGGGGGACACCTCGGCCGCG CTCTCCGCCTACTGCGCCGCCGCGGGGATCCCGGCCATCGTCTTCCTCCCCGCCAACCGC ATCTCGCTGGAGCAGCTCATCCAGCCCATCGCCAACGGCGCCACCGTGCTCTCGCTCGAC ACCGACTTCGACGGGTGCATGAGGCTCATCAGGGAGGTGACCGCCGAGCTGCCTATCTAC CTCGCCAACTCGCTCAACTCCCTCCGCCTCGAGGGGCAGAAGACGGCGGCCATCGAGATA CTGCAGCAGTTCGACTGGGAGGTGCCCGACTGGGTGATCGTGCCGGGAGGCAATCTGGGG AACATATACGCCTTCTACAAGGGGTTCGAGATGTGCCGTGTCCTCGGGCTCGTCGACCGC GTGCCGCGCCTCGTCTGCGCGCAGGCGGCCAACGCGAACCCGCTCTACGGCTACTACAAG TCAGGCTGGACCGAATTCCAGCCGCAGGTGGCCAGGCCGACGTTCGCGTCAGCGATCCAG ATCGGCGACCCGGTGTCCGTCGACCGGGCCGTGGTGGCGCTCAAGGCGACGGACGGCATT GTCGAGGAGGCGACGGAGGAAGAGCTCATGAACGCGATGTCGCTCGCCGACCGCACCGGG ATGTTCGCCTGCCCGCACACCGGGGTCGCGCTCGCCGCCCTGTTCAAGCTCAGGGAGCAG CGCGTCATCGGGACGAACGACCGCACCGTGGTCGTCAGCACGGCTCACGGCCTCAAGTTC TCGCAGTCGAAGATCGACTACCATGACAGCAAGATCGAGGACATGGCTTGCAAGTACTCC AACCCGCCTGTGAGCGTGAAGGCCGACTTTGGCGCCGTCATGGATGTGCTGAAGAAGAGG CTCAAGGGCAAGCTCTGA

Peptide Sequence

PEP ID	Zm00001d038904_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:166755499:166757076:1 gene:Zm00001d038904 transcript:Zm00001d038904_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine synthase 1 chloroplastic
Sequence	MAATTHAASMSFLLSHPQSRSATPSRHLPLRPAARRVQCATDAAALSPAVTTKHRRAADE NIREEAARHPAPKQGLSAWYEPFPPAPNGDPNERYSLDEIVYRSSSGGLLDVRHDMEALS RFSGAYWRDLFDSRIGRTTWPYGSGVWSKKEFVLPEIEPDHIVSLFEGNSNLFWAERLGR DHLGGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRRAPLSRPIAGVGCASTGDTSAA LSAYCAAAGIPAIVFLPANRISLEQLIQPIANGATVLSLDTDFDGCMRLIREVTAELPIY LANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFEMCRVLGLVDR VPRLVCAQAANANPLYGYYKSGWTEFQPQVARPTFASAIQIGDPVSVDRAVVALKATDGI VEEATEEELMNAMSLADRTGMFACPHTGVALAALFKLREQRVIGTNDRTVVVSTAHGLKF SQSKIDYHDSKIEDMACKYSNPPVSVKADFGAVMDVLKKRLKGKL

Transcript Sequence

Transcript ID	Zm00001d038904_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:166755499:166757076:1 gene:Zm00001d038904 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine synthase 1 chloroplastic
Sequence	ATGGCGGCGACAACCCACGCCGCCTCCATGTCGTTCCTCCTCTCTCACCCCCAGTCGCGC TCTGCCACCCCAAGCCGCCACCTCCCGCTCCGTCCGGCAGCCCGCCGCGTCCAGTGCGCC ACCGACGCCGCCGCCCTTTCCCCGGCGGTCACCACCAAGCACCGGCGCGCGGCGGATGAG AACATCCGCGAGGAGGCGGCGCGGCACCCGGCCCCGAAGCAGGGCCTGTCGGCGTGGTAC GAGCCCTTCCCGCCGGCCCCGAACGGCGACCCCAACGAGCGCTACTCCCTGGACGAGATC GTGTACCGGTCCAGCTCGGGGGGCCTCCTCGACGTGCGGCACGACATGGAGGCGCTGTCC CGCTTCTCGGGCGCCTACTGGCGCGACCTCTTCGACTCCCGCATCGGGCGCACCACCTGG CCGTACGGGTCCGGCGTGTGGTCCAAGAAGGAGTTCGTGCTCCCCGAGATCGAGCCCGAC CACATCGTCTCCCTGTTCGAGGGCAACTCGAACCTGTTCTGGGCCGAGCGGCTGGGGCGC GACCACCTCGGCGGGATGAACGACCTGTGGGTGAAGCACTGCGGCATCTCCCACACGGGG TCGTTCAAGGACCTCGGCATGACCGTGCTGGTGAGCCAGGTGAACCGGCTCCGCCGCGCG CCGCTGTCGCGCCCCATCGCCGGCGTCGGGTGCGCGTCCACGGGGGACACCTCGGCCGCG CTCTCCGCCTACTGCGCCGCCGCGGGGATCCCGGCCATCGTCTTCCTCCCCGCCAACCGC ATCTCGCTGGAGCAGCTCATCCAGCCCATCGCCAACGGCGCCACCGTGCTCTCGCTCGAC ACCGACTTCGACGGGTGCATGAGGCTCATCAGGGAGGTGACCGCCGAGCTGCCTATCTAC CTCGCCAACTCGCTCAACTCCCTCCGCCTCGAGGGGCAGAAGACGGCGGCCATCGAGATA CTGCAGCAGTTCGACTGGGAGGTGCCCGACTGGGTGATCGTGCCGGGAGGCAATCTGGGG AACATATACGCCTTCTACAAGGGGTTCGAGATGTGCCGTGTCCTCGGGCTCGTCGACCGC GTGCCGCGCCTCGTCTGCGCGCAGGCGGCCAACGCGAACCCGCTCTACGGCTACTACAAG TCAGGCTGGACCGAATTCCAGCCGCAGGTGGCCAGGCCGACGTTCGCGTCAGCGATCCAG ATCGGCGACCCGGTGTCCGTCGACCGGGCCGTGGTGGCGCTCAAGGCGACGGACGGCATT GTCGAGGAGGCGACGGAGGAAGAGCTCATGAACGCGATGTCGCTCGCCGACCGCACCGGG ATGTTCGCCTGCCCGCACACCGGGGTCGCGCTCGCCGCCCTGTTCAAGCTCAGGGAGCAG CGCGTCATCGGGACGAACGACCGCACCGTGGTCGTCAGCACGGCTCACGGCCTCAAGTTC TCGCAGTCGAAGATCGACTACCATGACAGCAAGATCGAGGACATGGCTTGCAAGTACTCC AACCCGCCTGTGAGCGTGAAGGCCGACTTTGGCGCCGTCATGGATGTGCTGAAGAAGAGG CTCAAGGGCAAGCTCTGA