Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038894_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:166576973:166590299:-1 gene:Zm00001d038894 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase STN7 chloroplastic
Sequence

ATGGCCGCTAGTGGCCTCGGTCTCTCCACCTCCTTCCTCCCCGGCCACGACACCCTCCTC
CGGCGCCGGCGCCGGCGGCCGGCGGGCCACGCCGCCGCGTCGTTCCGGCCGGTGACGGCG
GAGCTCGGCGGCGTCGCGACGGAGCTGGGCCGCCAGCTGGTGGAGGCGGTGGGCGTGGGG
CTCCCCTGCACCGTCATGCAGTGCGGCGACGTCATCTACCGCAGCACGCTCCCCCGGAAC
GACGGGCTCACCATCACGGCCCCCGGCCTCACGCTCGCGCTCGCTACCGTGTCGTACCTC
TGGTCCACGCCAGGCGTCGCGCCGGGGTTCTTCGACATGTTCGTCCTCGCCTTCGCCGAA
CGCCTCTTCCGCCCTACCTTCCGCAAGGATGACTTGGTATTTGGGAAGAAGCTCGGGGAG
GGCGCATTCGGGGTCGTGTGTAAGGCTTCACTGGCGAACCCCGAAGCGGCGAAGAAGGTA
AGGCTAATGATATCTATAACACTGGCAATTTGTGTCAACAAGTCATACCAATGGACGTCT
AAAACCTTTTGTTCATCTTTGAAGCAAGGGGATTTGGTCGTGAAGAAGGCAACAGAGTAT
GGTGCAGTGGAGATTTGGATGAATGAACGTGTCAGGAGGGCATGCGCTAGTAGCTGTGCG
GATTTTATTTATGGCTTTTGCGAGACAAAAGCAAAAGGTAAGGGAGCTGAAGAATATTGG
CTTATTTGGCGTTTTGAAGGTGAGGATACACTTTATGATCTCATGCAAAGCAAGGAATTC
CCTTACAATGTGGAGACAAAAATTCTTGGCGGTATCCAAGACTTGCCAAAGGGAATAGCG
AGAGAGAATAAGATCATTCAAACGGTGATGAGACAACTCTTATTTGCTCTTGACGGACTT
CATTCGACAGGAATTGTTCACAGAGATATAAAACCTCAAAATGTGATATTTTCAGAGGGA
TCACGAACCTTCAAAATTATTGATCTTGGAGCAGCAGCTGACTTACGTGTAGGAATTAAC
TATATTCCTAAAGAGTTCCTTTTGGATCCAAGGTATGCTGCTCCAGAACAATATATTATG
AGCACACAAACCCCGTCTGCTCCTTCTGTTCCAGTTGCAACAACTTTGTCTCCAGTCCTG
TGGCAGCTGAACCTTCCTGACAGATTCGACATATATAGCTTGGGTCTCATATTCTTACAG
ATGGCATTCCCTTCACTACGAACTGATAGCAACCTCATACAATTTAATCGCCAACTGAAA
AGATGTGATTATGACTTACAAGCTTGGAGGAATCTGGTGGAGCCACGAGCGAGTGCTGAG
CTCCGGAGGGGCTTTGACATCATGGATTTAGACGGTGGTATCGGATGGGAACTCCTCACC
TCGATGGTCCGGTACAAAGCACGGCAGAGGACCAGTGCTAAGGCCGCATTGGCACACCCG
TACTTCAACCGTGAAGGGCTCCTTGGCCTCTCCGTCATGCAAAACGTACGGCTGCAACTG
TTCCGCGCAACCCAGAAGGACTACAGTGAAGCAGCGCGGTGGGTTATCGGCCTCATGGCA
AGGTCAGGAACTGAAGATGTGGGAGGCTTTACAGAAGCACAGCTTCAAGAGCTTAGGGAA
ATAAAACCAAAGAAAAGCAGCACCCAGCGGAACGCGCTTGCCTCCGTGCTGCGCCTGCAG
AGGAAGATCATGAGAACGATCAAGGAGAGCATGGACGAGCTCAACAGCCAGCGCAAAAGC
ATCTGGTGGAGCCGGTGGATACCCAGGGAGGAGTAG

Peptide Sequence

PEP ID

Zm00001d038894_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:166576973:166590299:-1 gene:Zm00001d038894 transcript:Zm00001d038894_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase STN7 chloroplastic
Sequence

MAASGLGLSTSFLPGHDTLLRRRRRRPAGHAAASFRPVTAELGGVATELGRQLVEAVGVG
LPCTVMQCGDVIYRSTLPRNDGLTITAPGLTLALATVSYLWSTPGVAPGFFDMFVLAFAE
RLFRPTFRKDDLVFGKKLGEGAFGVVCKASLANPEAAKKVRLMISITLAICVNKSYQWTS
KTFCSSLKQGDLVVKKATEYGAVEIWMNERVRRACASSCADFIYGFCETKAKGKGAEEYW
LIWRFEGEDTLYDLMQSKEFPYNVETKILGGIQDLPKGIARENKIIQTVMRQLLFALDGL
HSTGIVHRDIKPQNVIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIM
STQTPSAPSVPVATTLSPVLWQLNLPDRFDIYSLGLIFLQMAFPSLRTDSNLIQFNRQLK
RCDYDLQAWRNLVEPRASAELRRGFDIMDLDGGIGWELLTSMVRYKARQRTSAKAALAHP
YFNREGLLGLSVMQNVRLQLFRATQKDYSEAARWVIGLMARSGTEDVGGFTEAQLQELRE
IKPKKSSTQRNALASVLRLQRKIMRTIKESMDELNSQRKSIWWSRWIPREE

Transcript Sequence

Transcript ID

Zm00001d038894_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:166576973:166590299:-1 gene:Zm00001d038894 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase STN7 chloroplastic
Sequence

TTTTTCAACCAGGAAAAGGTCGGGAAAAAAATCCGAAATGGCCGCTAGTGGCCTCGGTCT
CTCCACCTCCTTCCTCCCCGGCCACGACACCCTCCTCCGGCGCCGGCGCCGGCGGCCGGC
GGGCCACGCCGCCGCGTCGTTCCGGCCGGTGACGGCGGAGCTCGGCGGCGTCGCGACGGA
GCTGGGCCGCCAGCTGGTGGAGGCGGTGGGCGTGGGGCTCCCCTGCACCGTCATGCAGTG
CGGCGACGTCATCTACCGCAGCACGCTCCCCCGGAACGACGGGCTCACCATCACGGCCCC
CGGCCTCACGCTCGCGCTCGCTACCGTGTCGTACCTCTGGTCCACGCCAGGCGTCGCGCC
GGGGTTCTTCGACATGTTCGTCCTCGCCTTCGCCGAACGCCTCTTCCGCCCTACCTTCCG
CAAGGATGACTTGGTATTTGGGAAGAAGCTCGGGGAGGGCGCATTCGGGGTCGTGTGTAA
GGCTTCACTGGCGAACCCCGAAGCGGCGAAGAAGGTAAGGCTAATGATATCTATAACACT
GGCAATTTGTGTCAACAAGTCATACCAATGGACGTCTAAAACCTTTTGTTCATCTTTGAA
GCAAGGGGATTTGGTCGTGAAGAAGGCAACAGAGTATGGTGCAGTGGAGATTTGGATGAA
TGAACGTGTCAGGAGGGCATGCGCTAGTAGCTGTGCGGATTTTATTTATGGCTTTTGCGA
GACAAAAGCAAAAGGTAAGGGAGCTGAAGAATATTGGCTTATTTGGCGTTTTGAAGGTGA
GGATACACTTTATGATCTCATGCAAAGCAAGGAATTCCCTTACAATGTGGAGACAAAAAT
TCTTGGCGGTATCCAAGACTTGCCAAAGGGAATAGCGAGAGAGAATAAGATCATTCAAAC
GGTGATGAGACAACTCTTATTTGCTCTTGACGGACTTCATTCGACAGGAATTGTTCACAG
AGATATAAAACCTCAAAATGTGATATTTTCAGAGGGATCACGAACCTTCAAAATTATTGA
TCTTGGAGCAGCAGCTGACTTACGTGTAGGAATTAACTATATTCCTAAAGAGTTCCTTTT
GGATCCAAGGTATGCTGCTCCAGAACAATATATTATGAGCACACAAACCCCGTCTGCTCC
TTCTGTTCCAGTTGCAACAACTTTGTCTCCAGTCCTGTGGCAGCTGAACCTTCCTGACAG
ATTCGACATATATAGCTTGGGTCTCATATTCTTACAGATGGCATTCCCTTCACTACGAAC
TGATAGCAACCTCATACAATTTAATCGCCAACTGAAAAGATGTGATTATGACTTACAAGC
TTGGAGGAATCTGGTGGAGCCACGAGCGAGTGCTGAGCTCCGGAGGGGCTTTGACATCAT
GGATTTAGACGGTGGTATCGGATGGGAACTCCTCACCTCGATGGTCCGGTACAAAGCACG
GCAGAGGACCAGTGCTAAGGCCGCATTGGCACACCCGTACTTCAACCGTGAAGGGCTCCT
TGGCCTCTCCGTCATGCAAAACGTACGGCTGCAACTGTTCCGCGCAACCCAGAAGGACTA
CAGTGAAGCAGCGCGGTGGGTTATCGGCCTCATGGCAAGGTCAGGAACTGAAGATGTGGG
AGGCTTTACAGAAGCACAGCTTCAAGAGCTTAGGGAAATAAAACCAAAGAAAAGCAGCAC
CCAGCGGAACGCGCTTGCCTCCGTGCTGCGCCTGCAGAGGAAGATCATGAGAACGATCAA
GGAGAGCATGGACGAGCTCAACAGCCAGCGCAAAAGCATCTGGTGGAGCCGGTGGATACC
CAGGGAGGAGTAGGCCGGCCGCAGGCGCACATGTACATCGTCCACTTCTGTATGAAACGT
CACCTATTAGCACTGGTGAATTGGTGATAGTATAATACACTATCCTACTTACTGCTTTGT
ACATGCTGACGACTGGTGAGTAAAATTCATCTGAAAAAAAAATCGGAGTAACGCGATGTA
TAGCTGTAAATATTTTGCATTGAAGCATCATGATTTTTGAGATCAGCTCTCTGCTT