Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038874_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:6:166206492:166209003:1 gene:Zm00001d038874 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable polygalacturonase
Sequence	ATGGCCAAGGCCGTGCCCTCGCCGCTCGCGGCCGTGGCCGTGTTGGCGCTGCTCCTCCTG TGCCGCGGCGCCGAGGCCCGCGTCCTCCTCACGCTCGACGACTTCGGCGGCGTCGGCGAC GGCATTGCCAACGACACCCAGGCTCTCCTGGACGCGTGGGCCGCCGCGTGCAGCTCCACC CAGGAGGCCGTCCTCGCCGTGCCGGCCGGGAAGGTCTACCAGATCTGGCCGGTGCAGCTC TCCGGGCCCTGCAAGAAGAGGCTCAAGCTGCTGATTTCCGGCGCGATCGTGGCGCCGTCG AGCCCCGACGAGTGGGCCGGGCGGGACCCCATGAAGTGGCTCTACGTCTACGGCGTCGAC GGCCTGTCCGTCAGCGGCGGCGGCACCATCGACGGCATGGGGCAGCAGTGGTGGGCCAGC ACCTGCAAGCGCAAGAAGACCCAGCCGTGCTACTCGGGGCCTCGTCCAAAGGCGGTGCAC TTCGAGGAGTGCCGGGAGGTGAGCGTGCAGGGCGTGACGCTGCAGAACGCGCAGCAGTTC CAGCTGACGTTCACGCGCTGCTCCTGCGTGAAGGCCAGCTTCCTCCGGGTGGTGGCGCCG GCGGACAGCCCCAACACCGACGGCATCCACCTCAACGACACCTCCCACGTCCGCATCACG GACAACCTCATCTCCACAGGGGACGACTGCGTCTCCATGGTCGGCAATTGCTCTGACGTC CGTGTGAAAGACATCTCATGTGGGCCTGGCCATGGCATCAGCATCGGAAGCCTTGGAAAG AACCGGACCACCGACATGGTGGAGGACGTGAAGGTCGACACCTGCTTGCTCACCAACACG ACCAACGGCGTCCGTATCAAGAGCTGGCAGGGAGGCACGGGCTTCGCGCGGGACCTGCGG TTCGAGAACATCGTGATGAGGAACGTCTCCAACCCCATCATCATCGACCAGTACTACTGC GACCAGCCCACGCCCTGCGCCAACCAGGCACGCCATTCCTCAACGCAGGCGGTGGAGGTG CGCAGGGTGGAGTTCGCGGGCATCCGGGGCACGTCGGCGACGCCGCAGGCGATCAGCATC GCGTGCAGCGACGCCGTGCCGTGCCGGGACCTGGAGCTGGCGAACGTCAACCTGACGCTG GAGGGCGGTGGTGCCGGCCGAGCCACCGCCCTCTGCTACCGGGCGTCGGGGAAGAGCGCC GGCACCGTGGTCCCGCCGTCCTGCCTCGCCAGGTCCTGA

Peptide Sequence

PEP ID	Zm00001d038874_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:6:166206492:166209003:1 gene:Zm00001d038874 transcript:Zm00001d038874_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable polygalacturonase
Sequence	MAKAVPSPLAAVAVLALLLLCRGAEARVLLTLDDFGGVGDGIANDTQALLDAWAAACSST QEAVLAVPAGKVYQIWPVQLSGPCKKRLKLLISGAIVAPSSPDEWAGRDPMKWLYVYGVD GLSVSGGGTIDGMGQQWWASTCKRKKTQPCYSGPRPKAVHFEECREVSVQGVTLQNAQQF QLTFTRCSCVKASFLRVVAPADSPNTDGIHLNDTSHVRITDNLISTGDDCVSMVGNCSDV RVKDISCGPGHGISIGSLGKNRTTDMVEDVKVDTCLLTNTTNGVRIKSWQGGTGFARDLR FENIVMRNVSNPIIIDQYYCDQPTPCANQARHSSTQAVEVRRVEFAGIRGTSATPQAISI ACSDAVPCRDLELANVNLTLEGGGAGRATALCYRASGKSAGTVVPPSCLARS

Transcript Sequence

Transcript ID	Zm00001d038874_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:166206492:166209003:1 gene:Zm00001d038874 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable polygalacturonase
Sequence	CTCCCGTCCTCCCCTCTCCTCTCATCAACCTCTGCTGACCTCCCCGACCCCCGAGGCCGT TCGTTCGGTGCCTGCACTGCGCAGCAGCGCCGGCTGCTGGAGCTGGTCGGCGCGCGCAAC AATGGCCAAGGCCGTGCCCTCGCCGCTCGCGGCCGTGGCCGTGTTGGCGCTGCTCCTCCT GTGCCGCGGCGCCGAGGCCCGCGTCCTCCTCACGCTCGACGACTTCGGCGGCGTCGGCGA CGGCATTGCCAACGACACCCAGGCTCTCCTGGACGCGTGGGCCGCCGCGTGCAGCTCCAC CCAGGAGGCCGTCCTCGCCGTGCCGGCCGGGAAGGTCTACCAGATCTGGCCGGTGCAGCT CTCCGGGCCCTGCAAGAAGAGGCTCAAGCTGCTGATTTCCGGCGCGATCGTGGCGCCGTC GAGCCCCGACGAGTGGGCCGGGCGGGACCCCATGAAGTGGCTCTACGTCTACGGCGTCGA CGGCCTGTCCGTCAGCGGCGGCGGCACCATCGACGGCATGGGGCAGCAGTGGTGGGCCAG CACCTGCAAGCGCAAGAAGACCCAGCCGTGCTACTCGGGGCCTCGTCCAAAGGCGGTGCA CTTCGAGGAGTGCCGGGAGGTGAGCGTGCAGGGCGTGACGCTGCAGAACGCGCAGCAGTT CCAGCTGACGTTCACGCGCTGCTCCTGCGTGAAGGCCAGCTTCCTCCGGGTGGTGGCGCC GGCGGACAGCCCCAACACCGACGGCATCCACCTCAACGACACCTCCCACGTCCGCATCAC GGACAACCTCATCTCCACAGGGGACGACTGCGTCTCCATGGTCGGCAATTGCTCTGACGT CCGTGTGAAAGACATCTCATGTGGGCCTGGCCATGGCATCAGCATCGGAAGCCTTGGAAA GAACCGGACCACCGACATGGTGGAGGACGTGAAGGTCGACACCTGCTTGCTCACCAACAC GACCAACGGCGTCCGTATCAAGAGCTGGCAGGGAGGCACGGGCTTCGCGCGGGACCTGCG GTTCGAGAACATCGTGATGAGGAACGTCTCCAACCCCATCATCATCGACCAGTACTACTG CGACCAGCCCACGCCCTGCGCCAACCAGGCACGCCATTCCTCAACGCAGGCGGTGGAGGT GCGCAGGGTGGAGTTCGCGGGCATCCGGGGCACGTCGGCGACGCCGCAGGCGATCAGCAT CGCGTGCAGCGACGCCGTGCCGTGCCGGGACCTGGAGCTGGCGAACGTCAACCTGACGCT GGAGGGCGGTGGTGCCGGCCGAGCCACCGCCCTCTGCTACCGGGCGTCGGGGAAGAGCGC CGGCACCGTGGTCCCGCCGTCCTGCCTCGCCAGGTCCTGACTGAGACTCACCTAGCGAAG CAGTGGCCGATTGGAGCTGTTGCCATACCCAAACAAAACCAACCTGTTGATTGTACACGC CGTTGTTGACGACAAGGAAACACAGAGAAGAAATATCGGAGCTTCTTACCTGCAAAATGT CGTTCGCACTTAAAAAAGGTTCGGATTAAAAAAACACAA