Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038868_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:6:166150090:166157348:1 gene:Zm00001d038868 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin/Brf1-like TBP-binding protein
Sequence	ATGGTTTACTGCACTCATTGCGCTGATTACTGCCCCTCCATAAAGGATCCTGACAAAGGA TACATATGTTGTGGTACATGTGGGAAGGTTCTTGACCAGGAGGTATACACTGATGAGCCT ACTTTTGTTAAGGATAACAAAGGGCAGAGTCGCTTAGCTGGAAGTATTCTTGAAAGCATT GAGTCTGGATATTCAATGTCTCGTCAAAGAACCTTAGACAAAGGGAGGGATGAGATTAGG CAGATTGTCAATAACTTACATATCAGCGGTGGAGAAACTATCGTTAGCAAGGCATTTCGC TTCTACGAGCTAGCTCTCGACCGTAATTTTACCAGGGGGCGTAGAACAACACATGTTGCA GCTGCTTGCCTTTACATTGCCTGCAGGCAAAGTAAGAAGGCTTATCTTCTTATCGATTTC TCTGACCATCTCCAAATAAGTGTCTACGTCCTAGGTGCTGTTTTTCTTCAGCTCTGCCAA GTTTTGCAACTTGCAGAACATCCAGTTGTTCAGAAACTTGTAGATCCCAGTCTTTTCATC CATCGTTTTACAAAACTTTTGCTGGGAAGAAGAAATAATGATGTCTCGGACACAGCTTTA CGCATTGTAGCTAGCATGAAGAGAGATTGGATGCAGGCAGGTACTGGGAGGAAGCCAAGC GGATTATGTGGTGCAGCATTATACATTGCTGCACTCTCTCATGGGTGTAATTACACCAAG GCAGATATTGTCTCTGTTGTGCATGTGTGTGAGGCCACTCTAACGAAGCGATTGATAGAG TTCGAAAATACAGATTCTGGCAGCTTAACAATTGAAGAATTTCTGGCAACAGCTGATGAA TCTAATGAAGAGCCTGTTTCAAAACATTCGCCCAAGTCTGGAGAAATTCTCTGCAAACAC AAGGATAAAGGTTTTGAGCATTTTGCTCATGGACTTTGTGAAAAATGCTACAATAAGTTC ACTAAACTGTCGGGTGGACTAGAAGGTGGTTCTGACCCTCCAGCATTCCAACGAGCTGAA AAGAAAAGACTTGAAGCTGCTAAAAGGGCTGAAGAAGCTGCAGCAGCTAAGGAGGCAGCG CTGGAAGAATCTCTTTGCGACACACAGAATTCTGAGGTTGAGAGTGCCATGACTCCTAGA AAGGGTTTAAGTGGAGATAAATCTTCGAAAATGGGATCTGAGGGACTCATAAATGACTCT ATGCCACCCAAGGATCCTGAAGAGGGAGGTGAAAATTGTGAAGGCAATGCAGATCCAGAA AGCCTTTCTGACATTGACGATGCAGAGGTTGATGGGTACCTTCACAATGAGGAAGAAACA CAATATAAAAAGATTATCTGGGAGGAAATGAACAAAGAGTACCTTGAGGAACAAGCAGCC AAGGAAGCTTTGGCAGCTGAATTGGCAGCTAGAGGGATTGATCCAGAAGCGGGAAAGAAA AAACGAAAACGTAATGAAGGCACGAAGAGCTCGACACCTGCTGAAACACCAGCAGAAGCC ACGTGCAACATGCTGAAACGGAAGGGACTTGGTTCAAAGATCAATGTGGGAGCTGTTGAC GAATTGTACAAGACTAAAGATGAAGTTGGCAGCGCAAACAATGAAGAAGAGATGGAGTTC GACGCACTGTTTGGGCCGGACAATGCTGCCGGTGAGACGGTCGATGACGGTTACAATTAC AACTATGGGGGATACGACGACGATGGCGCAGAAGGCTACAATGGCCTTGATGACGATTTC GATTTCTAG

Peptide Sequence

PEP ID	Zm00001d038868_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:6:166150090:166157348:1 gene:Zm00001d038868 transcript:Zm00001d038868_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin/Brf1-like TBP-binding protein
Sequence	MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTDEPTFVKDNKGQSRLAGSILESI ESGYSMSRQRTLDKGRDEIRQIVNNLHISGGETIVSKAFRFYELALDRNFTRGRRTTHVA AACLYIACRQSKKAYLLIDFSDHLQISVYVLGAVFLQLCQVLQLAEHPVVQKLVDPSLFI HRFTKLLLGRRNNDVSDTALRIVASMKRDWMQAGTGRKPSGLCGAALYIAALSHGCNYTK ADIVSVVHVCEATLTKRLIEFENTDSGSLTIEEFLATADESNEEPVSKHSPKSGEILCKH KDKGFEHFAHGLCEKCYNKFTKLSGGLEGGSDPPAFQRAEKKRLEAAKRAEEAAAAKEAA LEESLCDTQNSEVESAMTPRKGLSGDKSSKMGSEGLINDSMPPKDPEEGGENCEGNADPE SLSDIDDAEVDGYLHNEEETQYKKIIWEEMNKEYLEEQAAKEALAAELAARGIDPEAGKK KRKRNEGTKSSTPAETPAEATCNMLKRKGLGSKINVGAVDELYKTKDEVGSANNEEEMEF DALFGPDNAAGETVDDGYNYNYGGYDDDGAEGYNGLDDDFDF

Transcript Sequence

Transcript ID	Zm00001d038868_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:166150090:166157348:1 gene:Zm00001d038868 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin/Brf1-like TBP-binding protein
Sequence	ATCCGAGGCTAGGATCCATCGGTTCGTGAGAGCGTTGCTCCGTGTAGCTACAATTAAGGA ACCGTCGCCGCCGCGCGCCCCTGCCCTCGCCGCCGCCCGGTCTCGCCTCGACGCCTCCCA TAGCGATCTGCTTACTCTTTTAAGCCGGTGGCCGGAGCTCCGGCGGCCCTCTCCCTCACC GGATTCGGCGCCCTCTTCAGAGGATTCGGCGCCCTCTTCAGAGCCCTCGCTAACCTGCTC GACCGCTCCCCACCGCCCGCGGTCATCTCCCACCTCGCGCGACCGCCGTCCTCTCTTCAC CTGTTGGTCGCCCCTGTCCTCGCGACGAAGACGCCGCCGCCAAGCTATCCTCTCTATCTC TCTATCTATCTATCTATCTCATCAGATTGATATCAGCTGATCATCCCTGGCTGTGTAGTT CCATCTGCAATGGTTTACTGCACTCATTGCGCTGATTACTGCCCCTCCATAAAGGATCCT GACAAAGGATACATATGTTGTGGTACATGTGGGAAGGTTCTTGACCAGGAGGTATACACT GATGAGCCTACTTTTGTTAAGGATAACAAAGGGCAGAGTCGCTTAGCTGGAAGTATTCTT GAAAGCATTGAGTCTGGATATTCAATGTCTCGTCAAAGAACCTTAGACAAAGGGAGGGAT GAGATTAGGCAGATTGTCAATAACTTACATATCAGCGGTGGAGAAACTATCGTTAGCAAG GCATTTCGCTTCTACGAGCTAGCTCTCGACCGTAATTTTACCAGGGGGCGTAGAACAACA CATGTTGCAGCTGCTTGCCTTTACATTGCCTGCAGGCAAAGTAAGAAGGCTTATCTTCTT ATCGATTTCTCTGACCATCTCCAAATAAGTGTCTACGTCCTAGGTGCTGTTTTTCTTCAG CTCTGCCAAGTTTTGCAACTTGCAGAACATCCAGTTGTTCAGAAACTTGTAGATCCCAGT CTTTTCATCCATCGTTTTACAAAACTTTTGCTGGGAAGAAGAAATAATGATGTCTCGGAC ACAGCTTTACGCATTGTAGCTAGCATGAAGAGAGATTGGATGCAGGCAGGTACTGGGAGG AAGCCAAGCGGATTATGTGGTGCAGCATTATACATTGCTGCACTCTCTCATGGGTGTAAT TACACCAAGGCAGATATTGTCTCTGTTGTGCATGTGTGTGAGGCCACTCTAACGAAGCGA TTGATAGAGTTCGAAAATACAGATTCTGGCAGCTTAACAATTGAAGAATTTCTGGCAACA GCTGATGAATCTAATGAAGAGCCTGTTTCAAAACATTCGCCCAAGTCTGGAGAAATTCTC TGCAAACACAAGGATAAAGGTTTTGAGCATTTTGCTCATGGACTTTGTGAAAAATGCTAC AATAAGTTCACTAAACTGTCGGGTGGACTAGAAGGTGGTTCTGACCCTCCAGCATTCCAA CGAGCTGAAAAGAAAAGACTTGAAGCTGCTAAAAGGGCTGAAGAAGCTGCAGCAGCTAAG GAGGCAGCGCTGGAAGAATCTCTTTGCGACACACAGAATTCTGAGGTTGAGAGTGCCATG ACTCCTAGAAAGGGTTTAAGTGGAGATAAATCTTCGAAAATGGGATCTGAGGGACTCATA AATGACTCTATGCCACCCAAGGATCCTGAAGAGGGAGGTGAAAATTGTGAAGGCAATGCA GATCCAGAAAGCCTTTCTGACATTGACGATGCAGAGGTTGATGGGTACCTTCACAATGAG GAAGAAACACAATATAAAAAGATTATCTGGGAGGAAATGAACAAAGAGTACCTTGAGGAA CAAGCAGCCAAGGAAGCTTTGGCAGCTGAATTGGCAGCTAGAGGGATTGATCCAGAAGCG GGAAAGAAAAAACGAAAACGTAATGAAGGCACGAAGAGCTCGACACCTGCTGAAACACCA GCAGAAGCCACGTGCAACATGCTGAAACGGAAGGGACTTGGTTCAAAGATCAATGTGGGA GCTGTTGACGAATTGTACAAGACTAAAGATGAAGTTGGCAGCGCAAACAATGAAGAAGAG ATGGAGTTCGACGCACTGTTTGGGCCGGACAATGCTGCCGGTGAGACGGTCGATGACGGT TACAATTACAACTATGGGGGATACGACGACGATGGCGCAGAAGGCTACAATGGCCTTGAT GACGATTTCGATTTCTAGGATGTAGGAGTAGGGCATTTGCAGAACGGCAACGCTGACCAG CACGGGCAAGATTCTTCACGTGCACATTATATATAGTTTTTTTTGGTTAAGTTTCGACGA TTATTATGGAGCTCGATTGGGTAGTCATTGTATATTTATGTTTGAAACTAGGTTCTGCCT GGTTGTAGTTGTAACGGACTAATAAGGGCCCGTTTGGTACAGCTTCAGCTCCTGATTCTA AGCGAGGATCTGGAGGAGCCGTGCCAAACGGATATTTTTTAAACTGATTCTCGTGTGGAG CCGAAAGATTGAGAGTCGTTTTTG