Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038854_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:6:165898273:165902196:1 gene:Zm00001d038854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyltransferase family protein 64 protein C5
Sequence

ATGGCTAGCCAGGCTGCGCGGCGAGGAGGAGTGATGAGGCCACCGAGCAGCGGCGTGCGC
GCGGCGGCCGCGCGGTCGCCGGCCGCCTCGTTCCTGCTGGCCGCTGCGGCCGTGGCCGCG
CTCGTCGGCGGGTTCTACTTCTGGCTGGTGGTCTCGTCGTTCCGGCTCCCCGACTCGGGC
GACGCCGGGTGTCGCCCCGACGGCGAGGGGTCGTGGGCGGTCGGGATGTTCTACGGCAGC
AGTCCCCTCGCGCTCCGCCCCATCGAGCTGGAAGGGAGAAGCAATGGCAACAGCTCGGCG
TGGCCGGTAGCAAACCCCGTGCTGACATGCGCGACCGCGACGGAGGCGGGGTACCCGAGC
AACTTCGTTGCTGACCCGTTCCTCTACATCGAGGGGGATACACTATTTCTTTTCTTTGAA
ACAAAAACAACAACCTCAATGCAAGGTGATATTGGAGTTGCAAGAAGCTTTGACCAAGGT
GCGACGTGGGAATTTCTTGGCATCGCTCTAGATGAGGCATGGCATCTGTCATATCCTTTT
GTGTTCAAGTATGAGAATGAGATTTATATGATGCCAGAGGGAAACAAAAAGAAGGAGCTG
CGCCTTTATCGTGCTATTAAGTTTCCCCTTGAATGGACATTGGAGAAGGTTCTTGTCAAT
AAGCCACTCATTGATGCCTCATTAATCCAATTTGAGGGATATTGGTGGCTATTTGCCTCT
GATTTTACACGGCATGGCGTTGAGAAGAACGCAGAGCTTGAGATTTGGTACAGTAACTCT
CCTCTTGGTCCTTGGACTGAGCACAAGCAAAATCCTATCTACAAATCAGACAAAAGTCTG
GGAGCTCGAAATGGTGGGAGGCTCTTTGTTTTTGAAGGGTCATTATATCGCCCTGGTCAG
GATTGCAGTGGTACTTATGGTCGGAGGGTTAAGTTGTACAAAGTTGAAAAGTTAAGCAAG
GAAGAATACAAAGAAGTCCCCGTAAATCTTGGGATAGATGAACCAAAGAAAGGGAGAAAT
GCATGGAATGGCATGAGGTTCCATCACATGGATGCGCAACGACTTGCATCTGGTGCATGG
ATTGCTGTGATGGATGGTGATCGAGTCCCTTCAGGCGATTCAACCAGACGTTCGCTCATT
GGTTACATAGCTTTCCTGCTGGCCAGTGCCCTTGTCATTTTTGTGGGTTTTATGAAAGGT
GCAATCACTTGCTACATTCCTTCCAGTTTATGGGTTCCTCTTACAAGGAGAACAGAATTA
CCCCGCATCTTCTCTGTGCACCGCTTCAACCAGAAAGTCCGCAGATATTCTACCAGTATC
AGCAGATATATCTCTGCGGCCAAAACTAAGCTCGGTGAAAAGACCTGGTCCAACATGCTT
TTCTTCTGCGTAGTTGCTCTATTTACTATTGTGAATGTCTGCATTGCCGTGCATTTCTTA
TACGGTGGCAATGGTGCTGAAGAGGCATATACGTATCAAGGGCAACACTCTCAGTTCACC
ATGGTCACAATGACATACGAAGCTCGACTCTGGAATTTGAAAGTATTCATTGAACACTAC
TCCAGATGTGAATCAGTTAGGGAGATAGTTGTTGTCTGGAACAAAGGTAACCCTCCAAGC
AGTGACGCTTTTGACTCTACTGTGCCTGTGAGGATACGAGTTGAGGAGATCAATTCTCTT
AACAACAGATTCAGGGTCGATCCTCTGATAAAGACCCGTGCTGTTTTTGAACTGGACGAT
GACATCATGATGACTTGCACTGACTTAGAGAAAGGGTTTAGGGTCTGGAGAGAACACCCT
GAACGGATGGCGGGCTTTTACCCCCGGATGATAGATGGCAACCCTCTGCAATACAGGAAC
GAGAGGTATGCTAGGGGTAAGAACGGCTACAATCTGATACTCACAGGTGCTGCCTTCATG
GACAGCGAGTTCGCTTTCAAGACTTACTGGAGCGAGAAAGCTCGTGAAGGGAGGGACTAT
GTGCACAAGAACTTCAACTGTGAGGACTTGCTCATGAATTTTTTGTATGCGAACGCAAGC
TCCACAAGGACTGTGGAGTATGTCCACCCTGCGTGGGCTATCGATACATCCAAGCTTTCT
TCCGTGGCCATTAGCCGGGACACCCAGAAACACTACGATATCAGAACAGATTGCTTGGCA
AAGTTCTCCTCCATCTATGGCCCCCTCCCTCAGAAATGGGAGTTCGGCATGCGTGAAGAT
CATTGGGACAAATAG

Peptide Sequence

PEP ID

Zm00001d038854_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:6:165898273:165902196:1 gene:Zm00001d038854 transcript:Zm00001d038854_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyltransferase family protein 64 protein C5
Sequence

MASQAARRGGVMRPPSSGVRAAAARSPAASFLLAAAAVAALVGGFYFWLVVSSFRLPDSG
DAGCRPDGEGSWAVGMFYGSSPLALRPIELEGRSNGNSSAWPVANPVLTCATATEAGYPS
NFVADPFLYIEGDTLFLFFETKTTTSMQGDIGVARSFDQGATWEFLGIALDEAWHLSYPF
VFKYENEIYMMPEGNKKKELRLYRAIKFPLEWTLEKVLVNKPLIDASLIQFEGYWWLFAS
DFTRHGVEKNAELEIWYSNSPLGPWTEHKQNPIYKSDKSLGARNGGRLFVFEGSLYRPGQ
DCSGTYGRRVKLYKVEKLSKEEYKEVPVNLGIDEPKKGRNAWNGMRFHHMDAQRLASGAW
IAVMDGDRVPSGDSTRRSLIGYIAFLLASALVIFVGFMKGAITCYIPSSLWVPLTRRTEL
PRIFSVHRFNQKVRRYSTSISRYISAAKTKLGEKTWSNMLFFCVVALFTIVNVCIAVHFL
YGGNGAEEAYTYQGQHSQFTMVTMTYEARLWNLKVFIEHYSRCESVREIVVVWNKGNPPS
SDAFDSTVPVRIRVEEINSLNNRFRVDPLIKTRAVFELDDDIMMTCTDLEKGFRVWREHP
ERMAGFYPRMIDGNPLQYRNERYARGKNGYNLILTGAAFMDSEFAFKTYWSEKAREGRDY
VHKNFNCEDLLMNFLYANASSTRTVEYVHPAWAIDTSKLSSVAISRDTQKHYDIRTDCLA
KFSSIYGPLPQKWEFGMREDHWDK

Transcript Sequence

Transcript ID

Zm00001d038854_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:165898273:165902196:1 gene:Zm00001d038854 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyltransferase family protein 64 protein C5
Sequence

GGCGGCCTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCGAGGCA
GCCTGGGATCCGGTCGGGCGGTCGATGCTACGGCCGGTGTCGGGTGTCGCCGGGGCATGG
CTAGCCAGGCTGCGCGGCGAGGAGGAGTGATGAGGCCACCGAGCAGCGGCGTGCGCGCGG
CGGCCGCGCGGTCGCCGGCCGCCTCGTTCCTGCTGGCCGCTGCGGCCGTGGCCGCGCTCG
TCGGCGGGTTCTACTTCTGGCTGGTGGTCTCGTCGTTCCGGCTCCCCGACTCGGGCGACG
CCGGGTGTCGCCCCGACGGCGAGGGGTCGTGGGCGGTCGGGATGTTCTACGGCAGCAGTC
CCCTCGCGCTCCGCCCCATCGAGCTGGAAGGGAGAAGCAATGGCAACAGCTCGGCGTGGC
CGGTAGCAAACCCCGTGCTGACATGCGCGACCGCGACGGAGGCGGGGTACCCGAGCAACT
TCGTTGCTGACCCGTTCCTCTACATCGAGGGGGATACACTATTTCTTTTCTTTGAAACAA
AAACAACAACCTCAATGCAAGGTGATATTGGAGTTGCAAGAAGCTTTGACCAAGGTGCGA
CGTGGGAATTTCTTGGCATCGCTCTAGATGAGGCATGGCATCTGTCATATCCTTTTGTGT
TCAAGTATGAGAATGAGATTTATATGATGCCAGAGGGAAACAAAAAGAAGGAGCTGCGCC
TTTATCGTGCTATTAAGTTTCCCCTTGAATGGACATTGGAGAAGGTTCTTGTCAATAAGC
CACTCATTGATGCCTCATTAATCCAATTTGAGGGATATTGGTGGCTATTTGCCTCTGATT
TTACACGGCATGGCGTTGAGAAGAACGCAGAGCTTGAGATTTGGTACAGTAACTCTCCTC
TTGGTCCTTGGACTGAGCACAAGCAAAATCCTATCTACAAATCAGACAAAAGTCTGGGAG
CTCGAAATGGTGGGAGGCTCTTTGTTTTTGAAGGGTCATTATATCGCCCTGGTCAGGATT
GCAGTGGTACTTATGGTCGGAGGGTTAAGTTGTACAAAGTTGAAAAGTTAAGCAAGGAAG
AATACAAAGAAGTCCCCGTAAATCTTGGGATAGATGAACCAAAGAAAGGGAGAAATGCAT
GGAATGGCATGAGGTTCCATCACATGGATGCGCAACGACTTGCATCTGGTGCATGGATTG
CTGTGATGGATGGTGATCGAGTCCCTTCAGGCGATTCAACCAGACGTTCGCTCATTGGTT
ACATAGCTTTCCTGCTGGCCAGTGCCCTTGTCATTTTTGTGGGTTTTATGAAAGGTGCAA
TCACTTGCTACATTCCTTCCAGTTTATGGGTTCCTCTTACAAGGAGAACAGAATTACCCC
GCATCTTCTCTGTGCACCGCTTCAACCAGAAAGTCCGCAGATATTCTACCAGTATCAGCA
GATATATCTCTGCGGCCAAAACTAAGCTCGGTGAAAAGACCTGGTCCAACATGCTTTTCT
TCTGCGTAGTTGCTCTATTTACTATTGTGAATGTCTGCATTGCCGTGCATTTCTTATACG
GTGGCAATGGTGCTGAAGAGGCATATACGTATCAAGGGCAACACTCTCAGTTCACCATGG
TCACAATGACATACGAAGCTCGACTCTGGAATTTGAAAGTATTCATTGAACACTACTCCA
GATGTGAATCAGTTAGGGAGATAGTTGTTGTCTGGAACAAAGGTAACCCTCCAAGCAGTG
ACGCTTTTGACTCTACTGTGCCTGTGAGGATACGAGTTGAGGAGATCAATTCTCTTAACA
ACAGATTCAGGGTCGATCCTCTGATAAAGACCCGTGCTGTTTTTGAACTGGACGATGACA
TCATGATGACTTGCACTGACTTAGAGAAAGGGTTTAGGGTCTGGAGAGAACACCCTGAAC
GGATGGCGGGCTTTTACCCCCGGATGATAGATGGCAACCCTCTGCAATACAGGAACGAGA
GGTATGCTAGGGGTAAGAACGGCTACAATCTGATACTCACAGGTGCTGCCTTCATGGACA
GCGAGTTCGCTTTCAAGACTTACTGGAGCGAGAAAGCTCGTGAAGGGAGGGACTATGTGC
ACAAGAACTTCAACTGTGAGGACTTGCTCATGAATTTTTTGTATGCGAACGCAAGCTCCA
CAAGGACTGTGGAGTATGTCCACCCTGCGTGGGCTATCGATACATCCAAGCTTTCTTCCG
TGGCCATTAGCCGGGACACCCAGAAACACTACGATATCAGAACAGATTGCTTGGCAAAGT
TCTCCTCCATCTATGGCCCCCTCCCTCAGAAATGGGAGTTCGGCATGCGTGAAGATCATT
GGGACAAATAGGATGGCAATGGTGGTACACAACGGACTGGTTAAACCTTTTTTTGTTAAT
CCCCTAGAAAGTTTTGTAGCTTGGGGTCTACGGTGAAGTTTGTAGGTCCTTTGGGCAGAA
GTGCCCTTGGTTTGTGATGTACCTATTATATTCGCCTAGAAGCTTAGAATCTGATCAGGA
ATTCAGGATAGACAATTGTTCAAAAGTTTTTGAAGTTAATGCTGAAACAGACCAAAGGCA
GTGCAGTATCTGTGAATTGTGAAAGGCAGAGACAGAGAGGGAATTTGGAGACTGCATAGG
GATTAGTGGGTAGGAAGTTCAGACTTCAGATTGTTGGGTTCCCTTGTCTCTGCAGTTTGT
GTACATGTCTTCCTTTCTAAGATTGGACTAGCGTGTTGTGTGATTTTTTACCGTAAGAAT
TCTTTTTACAGCTCGTA