Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038823_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:165273721:165278568:1 gene:Zm00001d038823 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

ATGGCACCGCGCCCCGCCGCCGCAGTTTTCGTCGTTGCCGCCGTGGTGGTCCTGCTCCCT
CCTCCCGCGGCGGCGGCGGCGCCCCCCGTGGGGGTAAACTGGGGCACCATGATGTCGCAC
CCCATCCACCCATCTGCGGTGGTCGAGATGCTGCGCGCCAACGGGGTCGACCGGGTGAAG
CTCTTCGACGCCGACCCCTGGACGGTCTCCGCGCTCGCCGGGTCAGGCGTCCAGGCCATG
CTCGCCGCGCCCAACGACCAGCTCGCCTCCCTGGCCCGCGACCCGCGCCGCGCGCGCGAC
TGGGTCCGCCAAAACGTCACCGCCAACATCAACGCCGGCGTCGACGTCAGGTATGTGGCT
GTTGGCAATGAACCTTTTCTGAAGAGCTATAATGGCAGCTTCATCAACATTACCTTTCCA
GCACTCAAGAACATGCAGAGGGCTATAGATGAGGCTGGCTTTGGCCAACACATCAAAGTA
GTTGTGCCATTGAATGCTGATATCTACAGCTCCCCTGAGAACAAGCCAGTGCCATCTGCT
GGGACTTTCCGCAAGGATATCAATACCCTCATGGTTGACATTGTTAATTACCTCCATGCA
AATGATGCACCCTTTGTGGTTAACATCTACCCATTTCTCAGCCTATATCAGAATCCCAAC
TTTCCGCTGAATTTCTCCTTCTTTGATGGCGCTACCAAGCCAGTGTATGATCAAGGAATG
GTCTACACCAATGTGTTTGATGCCAACTTTGATACTCTTGTCTGGTCATTAAGGAAAGCT
GGTGTGCCCGACATGAGAATCATTGTTGGTGAAGTTGGCTGGCCATCTGATGGTGATAAG
AATGCTAACACCAAATATGCACAGAGGTTCTATAATGGTTTTCTGAAGAAAATGACAAAA
AATGTCGGCACGCCTCTGAGACCTGGTCGTATGGAAGTTTACCTGTTTGCGCTGATTGAT
GAGAACCAGAAGAGTGTCCTGCCTGGACGCTTTGAGCGTCACTGGGGACTATTCACATAT
GATGGAAAACCAAAGTTCTCTATGGATCTCAGTGGAAATGGCAAGGGCAGTGTAGCTGAA
GTGAAAGGGGTGCAGTACTTGCCACCACAATGGTGTGTATTCAACAAGGATACAAAGGAT
AAGTACAAAGATCTGCCAGCCTCTGTAAACTATGCATGCTCAAATGCAGATTGTACACCA
CTGGGGTATGGGTCCTCATGCAATGGTCTCAGCCATGATGGGAACATATCATATGCATTC
AACATCTATTTCCAGACAATGGATCAGGATGTCAGGGCTTGTTCTTTTGGAGGCCTTGCA
AAGATCACAACGACAAATGCTTCACAAGGAGGGTGCTTGTTTCCAGTACAGATTACGAGT
GCTTCAGTAACAGTGGTGCCACTGATATTTTTGCCTATGCTAGTCTCTGTGATCACTCTA
CTATAG

Peptide Sequence

PEP ID

Zm00001d038823_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:165273721:165278568:1 gene:Zm00001d038823 transcript:Zm00001d038823_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

MAPRPAAAVFVVAAVVVLLPPPAAAAAPPVGVNWGTMMSHPIHPSAVVEMLRANGVDRVK
LFDADPWTVSALAGSGVQAMLAAPNDQLASLARDPRRARDWVRQNVTANINAGVDVRYVA
VGNEPFLKSYNGSFINITFPALKNMQRAIDEAGFGQHIKVVVPLNADIYSSPENKPVPSA
GTFRKDINTLMVDIVNYLHANDAPFVVNIYPFLSLYQNPNFPLNFSFFDGATKPVYDQGM
VYTNVFDANFDTLVWSLRKAGVPDMRIIVGEVGWPSDGDKNANTKYAQRFYNGFLKKMTK
NVGTPLRPGRMEVYLFALIDENQKSVLPGRFERHWGLFTYDGKPKFSMDLSGNGKGSVAE
VKGVQYLPPQWCVFNKDTKDKYKDLPASVNYACSNADCTPLGYGSSCNGLSHDGNISYAF
NIYFQTMDQDVRACSFGGLAKITTTNASQGGCLFPVQITSASVTVVPLIFLPMLVSVITL
L

Transcript Sequence

Transcript ID

Zm00001d038823_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:165273721:165278568:1 gene:Zm00001d038823 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-Glycosyl hydrolases family 17 protein
Sequence

ACACACGACTACACGAGTACACGACGCCGCGAAGAAATCTCTCCACGCCCACGGCCTGAC
GGCCACGCTCCTCGCCTGCTTCGCCGATGCCAGCGCACTCCTCCCACCTTCTCTCCCGCA
ACCCGTAGCCCCACGACAGCCTCCCCCTCCCCTTCCACCTCCGATCCCATGGCACCGCGC
CCCGCCGCCGCAGTTTTCGTCGTTGCCGCCGTGGTGGTCCTGCTCCCTCCTCCCGCGGCG
GCGGCGGCGCCCCCCGTGGGGGTAAACTGGGGCACCATGATGTCGCACCCCATCCACCCA
TCTGCGGTGGTCGAGATGCTGCGCGCCAACGGGGTCGACCGGGTGAAGCTCTTCGACGCC
GACCCCTGGACGGTCTCCGCGCTCGCCGGGTCAGGCGTCCAGGCCATGCTCGCCGCGCCC
AACGACCAGCTCGCCTCCCTGGCCCGCGACCCGCGCCGCGCGCGCGACTGGGTCCGCCAA
AACGTCACCGCCAACATCAACGCCGGCGTCGACGTCAGGTATGTGGCTGTTGGCAATGAA
CCTTTTCTGAAGAGCTATAATGGCAGCTTCATCAACATTACCTTTCCAGCACTCAAGAAC
ATGCAGAGGGCTATAGATGAGGCTGGCTTTGGCCAACACATCAAAGTAGTTGTGCCATTG
AATGCTGATATCTACAGCTCCCCTGAGAACAAGCCAGTGCCATCTGCTGGGACTTTCCGC
AAGGATATCAATACCCTCATGGTTGACATTGTTAATTACCTCCATGCAAATGATGCACCC
TTTGTGGTTAACATCTACCCATTTCTCAGCCTATATCAGAATCCCAACTTTCCGCTGAAT
TTCTCCTTCTTTGATGGCGCTACCAAGCCAGTGTATGATCAAGGAATGGTCTACACCAAT
GTGTTTGATGCCAACTTTGATACTCTTGTCTGGTCATTAAGGAAAGCTGGTGTGCCCGAC
ATGAGAATCATTGTTGGTGAAGTTGGCTGGCCATCTGATGGTGATAAGAATGCTAACACC
AAATATGCACAGAGGTTCTATAATGGTTTTCTGAAGAAAATGACAAAAAATGTCGGCACG
CCTCTGAGACCTGGTCGTATGGAAGTTTACCTGTTTGCGCTGATTGATGAGAACCAGAAG
AGTGTCCTGCCTGGACGCTTTGAGCGTCACTGGGGACTATTCACATATGATGGAAAACCA
AAGTTCTCTATGGATCTCAGTGGAAATGGCAAGGGCAGTGTAGCTGAAGTGAAAGGGGTG
CAGTACTTGCCACCACAATGGTGTGTATTCAACAAGGATACAAAGGATAAGTACAAAGAT
CTGCCAGCCTCTGTAAACTATGCATGCTCAAATGCAGATTGTACACCACTGGGGTATGGG
TCCTCATGCAATGGTCTCAGCCATGATGGGAACATATCATATGCATTCAACATCTATTTC
CAGACAATGGATCAGGATGTCAGGGCTTGTTCTTTTGGAGGCCTTGCAAAGATCACAACG
ACAAATGCTTCACAAGGAGGGTGCTTGTTTCCAGTACAGATTACGAGTGCTTCAGTAACA
GTGGTGCCACTGATATTTTTGCCTATGCTAGTCTCTGTGATCACTCTACTATAGACATGG
AAGGCTAGTAGTAAGCACTGAAATATTAGGTTACTGAAGCAGGAATAGGTTTGCACATGA
CACAGGAAAGAAGAGTCACCCAAGATAAAGTTGACGAGGAAGACAAATTGTCGAACTCGA
ACCGAGTCGTTTTCTCTGTGCTACTGGCACTAGTAACATACCTGTATTAACTTTGGACAG
TGGGAAAGCTAAAATTTTGACATGCGATTGGTAGAAGCTAGATTTTCTACTGTC