Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038812_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:6:164963316:164983701:-1 gene:Zm00001d038812 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 92 description: homeobox2
Sequence	ATGGAAAAAAAGACAGTTCACGTTCCGGCTGAGGGTAATGGTGAGATTGAAAATGGTACG AGCTCTAGTCAGAATCCTGAGACCCTTGAGCATCCAGTTTTGCTGTCTGCATCTCAAACT GTGCCAAATAACTTGGGGATAAGGAAAAACTATAAAAGGGCAGCAAACAGAGGTTCAAAG ACAACATCTACTGAGCATGTGCAGCCTCCAGGACAACCAGCTGCCAAGAGAAGAAAAAGG AGCAGAGCCTCAAACAAAAATTCGACAGATGAGTTCTCACAAATTCGTAAACGGGTTAGA TACATTTTGAACCGAATGAATTATGAGCAAAGCCTAATTGAAGCTTATGCTAGTGAAGGC TGGAAAAATCAAAGTTTGGATAAGATAAGACCTGAGAAGGAGCTTGAACGAGCCAAATCA GAAATCTTACGATGCAAATTGAGAATACGGGAAGTCTTCCAAAATATTGATTCTCTTCTA TCCAAGGGGAAAATTGACGAATCTTTATTTGATTCTGAAGGAGAAATATCTTGTGAAGAT ATCTTTTGTGCTACTTGTGGTTCGAAAAATGCTACATTGGGTAATGATATCATTCTCTGT GATGGAGCTTGTGACAGAGGGTTCCACCAGAACTGTCTAAATCCTCCTCTGCGTACTGAA GATATTCCCATGGGAGATGAAGGATGGCTCTGCCCAGCATGTGATTGCAAGTTAGACTGT ATAGATCTAATAAATGAACTCCAGGGCAGTGACATCTCCATTGAGGACCCTTGGGAGAAA GTTTTTCCAGAGGCAGCTGCTATGGCCAATAGCTCTAAGCAAGATGAAGCATTTGATCTT CCATCTGATGATTCGGATGACAATGATTTTGACCCCAATATGCCTGAAGAGCATGTGGCT AGTAAGGAAGAAGGATCTTCTGAAGAGGAAGAGGATGATGACGGAGGATCAGACTCTGAC GACTCTGACTTCTTAACCTGTTCTGATGATTTGGAACCTTTGATAGATAAAAAGAATGTT GATGACCTGGGATTACCTTCTGAAGATTCAGAGGATGATGACTATGATCCAGCAGGTCCT GATTCGGATAAAGATGTCGAAAAGAAGTCAAATTCTGATGAGTCTGATTTCATGTCTGAC TCGGATGATTTTTGTAAGGAGATTAAAAAATCTGGTGGACATGATGAAGTTTCATCGCCT CCATTACCCGATGTCAAGGTGGGTGATATGGAAAAGAACACTGCTCAGTCTAACACAACA AGTTCTGCTGACGACCCTATGGAGACTGAAATAGACCAGAGTGTGGTTTTACCAGTATCA AGGAGGCGTCAAGCTGAACGGTTGGACTACAAAAGGCTGTATGATGAGGCATATGGTGAA GCATCATCTGATTCTAGTGATGAAGAAGAATGGTCTGGGAAGAAC

Peptide Sequence

PEP ID	Zm00001d038812_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:6:164963316:164983701:-1 gene:Zm00001d038812 transcript:Zm00001d038812_T011 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 92 description: homeobox2
Sequence	MEKKTVHVPAEGNGEIENGTSSSQNPETLEHPVLLSASQTVPNNLGIRKNYKRAANRGSK TTSTEHVQPPGQPAAKRRKRSRASNKNSTDEFSQIRKRVRYILNRMNYEQSLIEAYASEG WKNQSLDKIRPEKELERAKSEILRCKLRIREVFQNIDSLLSKGKIDESLFDSEGEISCED IFCATCGSKNATLGNDIILCDGACDRGFHQNCLNPPLRTEDIPMGDEGWLCPACDCKLDC IDLINELQGSDISIEDPWEKVFPEAAAMANSSKQDEAFDLPSDDSDDNDFDPNMPEEHVA SKEEGSSEEEEDDDGGSDSDDSDFLTCSDDLEPLIDKKNVDDLGLPSEDSEDDDYDPAGP DSDKDVEKKSNSDESDFMSDSDDFCKEIKKSGGHDEVSSPPLPDVKVGDMEKNTAQSNTT SSADDPMETEIDQSVVLPVSRRRQAERLDYKRLYDEAYGEASSDSSDEEEWSGKN

Transcript Sequence

Transcript ID	Zm00001d038812_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:164963316:164983701:-1 gene:Zm00001d038812 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 92 description: homeobox2
Sequence	GCCACGCCTCCCGCTCTTCCTCCCCGCCACACTCGCCCCACGCAGGAGAGGAGGAGAGCC GCCGGGCCTGGAAGCTTCTCCGCGGCGCTGCGTCGCCAGCTCGCAGCGATTTCAAGGTGC TGGTGAATCTGGCTTGGCCACATAGATCTTTTTTATTGTTGTCCTCAGAAGACAGGTTTG CTGAGACTGCTTTCTGTCTACTGTAAATTGATGAAATTTTGGTGATCATATACTATGGAA AAAAAGACAGTTCACGTTCCGGCTGAGGGTAATGGTGAGATTGAAAATGGTACGAGCTCT AGTCAGAATCCTGAGACCCTTGAGCATCCAGTTTTGCTGTCTGCATCTCAAACTGTGCCA AATAACTTGGGGATAAGGAAAAACTATAAAAGGGCAGCAAACAGAGGTTCAAAGACAACA TCTACTGAGCATGTGCAGCCTCCAGGACAACCAGCTGCCAAGAGAAGAAAAAGGAGCAGA GCCTCAAACAAAAATTCGACAGATGAGTTCTCACAAATTCGTAAACGGGTTAGATACATT TTGAACCGAATGAATTATGAGCAAAGCCTAATTGAAGCTTATGCTAGTGAAGGCTGGAAA AATCAAAGTTTGGATAAGATAAGACCTGAGAAGGAGCTTGAACGAGCCAAATCAGAAATC TTACGATGCAAATTGAGAATACGGGAAGTCTTCCAAAATATTGATTCTCTTCTATCCAAG GGGAAAATTGACGAATCTTTATTTGATTCTGAAGGAGAAATATCTTGTGAAGATATCTTT TGTGCTACTTGTGGTTCGAAAAATGCTACATTGGGTAATGATATCATTCTCTGTGATGGA GCTTGTGACAGAGGGTTCCACCAGAACTGTCTAAATCCTCCTCTGCGTACTGAAGATATT CCCATGGGAGATGAAGGATGGCTCTGCCCAGCATGTGATTGCAAGTTAGACTGTATAGAT CTAATAAATGAACTCCAGGGCAGTGACATCTCCATTGAGGACCCTTGGGAGAAAGTTTTT CCAGAGGCAGCTGCTATGGCCAATAGCTCTAAGCAAGATGAAGCATTTGATCTTCCATCT GATGATTCGGATGACAATGATTTTGACCCCAATATGCCTGAAGAGCATGTGGCTAGTAAG GAAGAAGGATCTTCTGAAGAGGAAGAGGATGATGACGGAGGATCAGACTCTGACGACTCT GACTTCTTAACCTGTTCTGATGATTTGGAACCTTTGATAGATAAAAAGAATGTTGATGAC CTGGGATTACCTTCTGAAGATTCAGAGGATGATGACTATGATCCAGCAGGTCCTGATTCG GATAAAGATGTCGAAAAGAAGTCAAATTCTGATGAGTCTGATTTCATGTCTGACTCGGAT GATTTTTGTAAGGAGATTAAAAAATCTGGTGGACATGATGAAGTTTCATCGCCTCCATTA CCCGATGTCAAGGTGGGTGATATGGAAAAGAACACTGCTCAGTCTAACACAACAAGTTCT GCTGACGACCCTATGGAGACTGAAATAGACCAGAGTGTGGTTTTACCAGTATCAAGGAGG CGTCAAGCTGAACGGTTGGACTACAAAAGGCTGTATGATGAGGCATATGGTGAAGCATCA TCTGATTCTAGTGATGAAGAAGAATGGTCTGGGAAGAACAC