Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038807_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:6:164812491:164817085:1 gene:Zm00001d038807 gene_biotype:protein_coding transcript_biotype:protein_coding description:periodic tryptophan protein 2
Sequence

ATGAACTACCGCTTCCAGAACCTCCTCGGCGCGCCGTACCGCGGCGGCGACGCCGTGTTC
GCGGGAGACTCACCCGTTCTCCTCTCCGCTGTTGGGAATCGCGTGGCCTCCACTGACCTC
ACTGCCTCCTCGTCTCTCACGCTTCCGTTCGAGTCCTCATCCAACGTCACCCGCCTCGCC
ACTTCCCCCTCGGGCGACTTCCTCCTCGCAGCCGATGACAATGGCCGCGCGCTCTACGCC
AACCTCCGCCGCCGCGCCGTACTCCACCGCGTTTCCTTCAAGGGCGCGCCATCAGCCGTC
CGCTTCAGCCCCGACGGTCAGCTCATCGCGGTGGCCGTCGGGAAGGTCGTGCAGATCTGG
CGCTCCCCGGGGTTTCGCAGGGAGTTCTTCCCCTTCCACCTCCTCCGCACTTTCCCGGGC
TTCGCCGCTGGCGTGACAGCATTCGATTGGTCACCGGACTCTGCGTTCCTCCTCGCGTCC
TGCAAGGACTTAACAGCTCGGCTCTTGCCTGTCAAGAAGGGACTAGGAGGCAAGCCTTTC
CTCTTCCTTGGCCATCGCGCGGCTGTCGTGGGTGCCTTCTTTGCCACGGACAAGAAGACA
AGGAGAGTCAAGGGGGTTTATACAGTCTCCAAGGATGGAGCTATCTTTACATGGGATTTG
GTGGAAGGAAATGAGGAAAATGATACTTCACCTCCGCCATCACCAGGGACGCCAGAGCAG
GGGTCAAAACAAAATGTCGTCGATGCCATGGAACTGGATGGTGGGAGCAGGAAAAGGAAG
ATTTTGGGAGAATTAGAGGGACTAGACACTATGCTGCATTTGGCAAAATGGGAGCTGCGG
GAAAAGCATTTCTTCATGCAGTCACCGGCTAAGTTAACAGCATGTGATTACCACCGAGAA
CTCGACATGGTGGTGGTTGGATTCTCTAGTGGAGTATTTGGGCTGTACCAGATGCCAGAC
TTTGTGTGCCTCCATCTGTTGTCAATATCAAGGGAGAAGATCACCACTGCTATTTTCAAC
AGTTCGGGGAGTTGGCTTGTCTTTGGATGTGCCAAACTTGGGCAGCTTCTGGTGTGGGAG
TGGCGGTCAGAGAGCTACATTTTGAAACAGCAGGGACACTACTTTGATGTGAATTGCATC
GCATACTCACCAGATTCTCAGATATTGGCCACTGGGGCTGATGATAACAAAGTCAAGGTC
TGGACAGTTTCATCTGGGTTCTGTTTCATAACATTTTCGGAGCATACAAATGCTGTAACT
GCGGTTCATTTTATGGCCAATAACCATTCTCTTCTAAGTGCCTCCCTTGATGGGACTATT
CGAGCATGGGATTTGTTTCGCTATCGCAACTTCAGGACATTTACCACCCCTTCACCTAGG
CAGTTTGTTTCTTTAACCGCAGACCAGAGTGGAGAAGTCATATGTGCTGGAACACTTGAT
TCGTTTGAGATATTTGTTTGGTCAATGAAAACTGGTCGATTGTTGGATGTACTCAGTGGT
CATGAAGGACCAGTGCATGGTCTAATGTTTTCACCAATTAATGCTATTCTGGCTTCATCA
TCATGGGACAAAACTGTTCGCCTCTGGGATGTCTTTGAGAGCAAGGGTGCAGTGGAAACT
TTTCAGCACTCACACGATGTTCTTACTTTAGCTTATCGACCTGATGGAAGGCAGATAGCA
TGCAGTACTTTAGATGGCCTAATTCATTTCTGGGATCCATCTGATGGTTTGTTGATGTAT
ACCATTGAGGGACGCAGGGATATTGCTGGGGGTCGCCTCATGACAGATAGGAGATCTGCA
GCTAATACAAGTATAGGAAAGTACTTCACAACATTGTGCTATTCTGCTGATGGAAGTTCT
ATTTTAGCTGGAGGAAACACCAAATATATTTGCATGTATGATGTTGGAGAACAGGTGCTG
TTGCGTAGGTTCCAGATCACTCGCAATCTCTCATTGGATGGAGTTCTTGATTTTCTGAAC
TCAAAGAAGATGACAGATGGTGGTGCACTAGATCTTATTGACGATGAAGACAGTGATGTT
GAAGAAGGAATTGATCGACATACTAGAGGAAACTTAGGGCTTGGTTTACCTGGATCAATG
GCAAATCGTGGAAGACCCATGGCTCGGACAAAATGTGTTAAGTTTGCTCCAACTGGAAGA
TCGTTTGCTGCAGCGACCACTGATGGTGTTTTATTGTACTCAGTTGATGAATCATTTATT
TTTGATCCAACGGACCTCGACATCGACGTTACGCCTGAGAAAGTAGAGGAAGCTCTTGCA
GAAAACCAACAACAAAGAGCCCTTATACTTAGCCTTCGGTTAAATGAGGATTTATTGATT
AAGAAGTGCATATTCGCAGTTGATCCAGCCGATGTGAGAGCAATTTGTTCGGCAATTCCT
TACAAGTATCTCCAAAGATTGATTGATACTTTCGCTAGTCTCTTGGAAAGTTGTCCCCAT
CTGGAATTTATCCTCCTGTGGTCTCAGGAGCTATGTAAGGTTCATGGCCACTATATTCAA
CAGAACTCCAGAACTTTGCTTCCTTCTCTGAAATCATTGCAGAAGTCTATAACAAGACTA
CATCAGGATTTGGCAGATACTTGCTCTTCTAATGAGTACTTGTTGAAATATCTTTGCACT
GCTGGTACGAAGAATTAG

Peptide Sequence

PEP ID

Zm00001d038807_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:6:164812491:164817085:1 gene:Zm00001d038807 transcript:Zm00001d038807_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:periodic tryptophan protein 2
Sequence

MNYRFQNLLGAPYRGGDAVFAGDSPVLLSAVGNRVASTDLTASSSLTLPFESSSNVTRLA
TSPSGDFLLAADDNGRALYANLRRRAVLHRVSFKGAPSAVRFSPDGQLIAVAVGKVVQIW
RSPGFRREFFPFHLLRTFPGFAAGVTAFDWSPDSAFLLASCKDLTARLLPVKKGLGGKPF
LFLGHRAAVVGAFFATDKKTRRVKGVYTVSKDGAIFTWDLVEGNEENDTSPPPSPGTPEQ
GSKQNVVDAMELDGGSRKRKILGELEGLDTMLHLAKWELREKHFFMQSPAKLTACDYHRE
LDMVVVGFSSGVFGLYQMPDFVCLHLLSISREKITTAIFNSSGSWLVFGCAKLGQLLVWE
WRSESYILKQQGHYFDVNCIAYSPDSQILATGADDNKVKVWTVSSGFCFITFSEHTNAVT
AVHFMANNHSLLSASLDGTIRAWDLFRYRNFRTFTTPSPRQFVSLTADQSGEVICAGTLD
SFEIFVWSMKTGRLLDVLSGHEGPVHGLMFSPINAILASSSWDKTVRLWDVFESKGAVET
FQHSHDVLTLAYRPDGRQIACSTLDGLIHFWDPSDGLLMYTIEGRRDIAGGRLMTDRRSA
ANTSIGKYFTTLCYSADGSSILAGGNTKYICMYDVGEQVLLRRFQITRNLSLDGVLDFLN
SKKMTDGGALDLIDDEDSDVEEGIDRHTRGNLGLGLPGSMANRGRPMARTKCVKFAPTGR
SFAAATTDGVLLYSVDESFIFDPTDLDIDVTPEKVEEALAENQQQRALILSLRLNEDLLI
KKCIFAVDPADVRAICSAIPYKYLQRLIDTFASLLESCPHLEFILLWSQELCKVHGHYIQ
QNSRTLLPSLKSLQKSITRLHQDLADTCSSNEYLLKYLCTAGTKN

Transcript Sequence

Transcript ID

Zm00001d038807_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:164812491:164817085:1 gene:Zm00001d038807 gene_biotype:protein_coding transcript_biotype:protein_coding description:periodic tryptophan protein 2
Sequence

CTAGGCTGCCGCCAACCCGACTGGCTCCCCCCTCACTCTTCTCCCGCCATGAACTACCGC
TTCCAGAACCTCCTCGGCGCGCCGTACCGCGGCGGCGACGCCGTGTTCGCGGGAGACTCA
CCCGTTCTCCTCTCCGCTGTTGGGAATCGCGTGGCCTCCACTGACCTCACTGCCTCCTCG
TCTCTCACGCTTCCGTTCGAGTCCTCATCCAACGTCACCCGCCTCGCCACTTCCCCCTCG
GGCGACTTCCTCCTCGCAGCCGATGACAATGGCCGCGCGCTCTACGCCAACCTCCGCCGC
CGCGCCGTACTCCACCGCGTTTCCTTCAAGGGCGCGCCATCAGCCGTCCGCTTCAGCCCC
GACGGTCAGCTCATCGCGGTGGCCGTCGGGAAGGTCGTGCAGATCTGGCGCTCCCCGGGG
TTTCGCAGGGAGTTCTTCCCCTTCCACCTCCTCCGCACTTTCCCGGGCTTCGCCGCTGGC
GTGACAGCATTCGATTGGTCACCGGACTCTGCGTTCCTCCTCGCGTCCTGCAAGGACTTA
ACAGCTCGGCTCTTGCCTGTCAAGAAGGGACTAGGAGGCAAGCCTTTCCTCTTCCTTGGC
CATCGCGCGGCTGTCGTGGGTGCCTTCTTTGCCACGGACAAGAAGACAAGGAGAGTCAAG
GGGGTTTATACAGTCTCCAAGGATGGAGCTATCTTTACATGGGATTTGGTGGAAGGAAAT
GAGGAAAATGATACTTCACCTCCGCCATCACCAGGGACGCCAGAGCAGGGGTCAAAACAA
AATGTCGTCGATGCCATGGAACTGGATGGTGGGAGCAGGAAAAGGAAGATTTTGGGAGAA
TTAGAGGGACTAGACACTATGCTGCATTTGGCAAAATGGGAGCTGCGGGAAAAGCATTTC
TTCATGCAGTCACCGGCTAAGTTAACAGCATGTGATTACCACCGAGAACTCGACATGGTG
GTGGTTGGATTCTCTAGTGGAGTATTTGGGCTGTACCAGATGCCAGACTTTGTGTGCCTC
CATCTGTTGTCAATATCAAGGGAGAAGATCACCACTGCTATTTTCAACAGTTCGGGGAGT
TGGCTTGTCTTTGGATGTGCCAAACTTGGGCAGCTTCTGGTGTGGGAGTGGCGGTCAGAG
AGCTACATTTTGAAACAGCAGGGACACTACTTTGATGTGAATTGCATCGCATACTCACCA
GATTCTCAGATATTGGCCACTGGGGCTGATGATAACAAAGTCAAGGTCTGGACAGTTTCA
TCTGGGTTCTGTTTCATAACATTTTCGGAGCATACAAATGCTGTAACTGCGGTTCATTTT
ATGGCCAATAACCATTCTCTTCTAAGTGCCTCCCTTGATGGGACTATTCGAGCATGGGAT
TTGTTTCGCTATCGCAACTTCAGGACATTTACCACCCCTTCACCTAGGCAGTTTGTTTCT
TTAACCGCAGACCAGAGTGGAGAAGTCATATGTGCTGGAACACTTGATTCGTTTGAGATA
TTTGTTTGGTCAATGAAAACTGGTCGATTGTTGGATGTACTCAGTGGTCATGAAGGACCA
GTGCATGGTCTAATGTTTTCACCAATTAATGCTATTCTGGCTTCATCATCATGGGACAAA
ACTGTTCGCCTCTGGGATGTCTTTGAGAGCAAGGGTGCAGTGGAAACTTTTCAGCACTCA
CACGATGTTCTTACTTTAGCTTATCGACCTGATGGAAGGCAGATAGCATGCAGTACTTTA
GATGGCCTAATTCATTTCTGGGATCCATCTGATGGTTTGTTGATGTATACCATTGAGGGA
CGCAGGGATATTGCTGGGGGTCGCCTCATGACAGATAGGAGATCTGCAGCTAATACAAGT
ATAGGAAAGTACTTCACAACATTGTGCTATTCTGCTGATGGAAGTTCTATTTTAGCTGGA
GGAAACACCAAATATATTTGCATGTATGATGTTGGAGAACAGGTGCTGTTGCGTAGGTTC
CAGATCACTCGCAATCTCTCATTGGATGGAGTTCTTGATTTTCTGAACTCAAAGAAGATG
ACAGATGGTGGTGCACTAGATCTTATTGACGATGAAGACAGTGATGTTGAAGAAGGAATT
GATCGACATACTAGAGGAAACTTAGGGCTTGGTTTACCTGGATCAATGGCAAATCGTGGA
AGACCCATGGCTCGGACAAAATGTGTTAAGTTTGCTCCAACTGGAAGATCGTTTGCTGCA
GCGACCACTGATGGTGTTTTATTGTACTCAGTTGATGAATCATTTATTTTTGATCCAACG
GACCTCGACATCGACGTTACGCCTGAGAAAGTAGAGGAAGCTCTTGCAGAAAACCAACAA
CAAAGAGCCCTTATACTTAGCCTTCGGTTAAATGAGGATTTATTGATTAAGAAGTGCATA
TTCGCAGTTGATCCAGCCGATGTGAGAGCAATTTGTTCGGCAATTCCTTACAAGTATCTC
CAAAGATTGATTGATACTTTCGCTAGTCTCTTGGAAAGTTGTCCCCATCTGGAATTTATC
CTCCTGTGGTCTCAGGAGCTATGTAAGGTTCATGGCCACTATATTCAACAGAACTCCAGA
ACTTTGCTTCCTTCTCTGAAATCATTGCAGAAGTCTATAACAAGACTACATCAGGATTTG
GCAGATACTTGCTCTTCTAATGAGTACTTGTTGAAATATCTTTGCACTGCTGGTACGAAG
AATTAGGTTGTGCTGGAAAATATCTTTGCACCGATCTCCCTGACGATTTCTATAGGAGGT
TGTTGTGCTTGCAAACCCAGACGCATGCGAGCTCTGAGCAGTTCTGCTTTGGACCTCTAG
GGGGATTGGCATCCGGGCTTAATCCTCTGGGCAGTGGCTGTTGTGTTCAGAACTACTGAG
CTGAAGCAACAATGTAACATGATCGATCCTCTGGAGAAAGTTGAGCTGTCTGGTTTTGTC
AGTGAAACGAGAGAAAAAAAATGTCGGGAACGATTAAAGTTATGTAACTTACCGTGTTAT
CAAATGTTTGGACCAGAACTGGAAATTGATATTTGTCATGAATCAAATAGAAGAAACATG
TTATATTCACTCCTGTTTTTTTT