Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d038805_T024
CDS Infomation

cds chromosome:B73_RefGen_v4:6:164801311:164807805:-1 gene:Zm00001d038805 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable transcriptional regulatory protein

Sequence

ATGGTCGTTGAAGTTCTAACTGACAAAATTACAAGATCAGTTGCTGACATTAGAAACGTG
GTGAAAGACTGCGGAGCAAAATTGGCTGATCCTGGATCTGTTACCTTTAGATTCAGACAA
GCTCGAGTGGTGAACATAAAAGTTACTGATGCAGATAAGGACCAACTGCTCACCGTTGCG
TTAGATGCTGGTGCTGATGACGTCCTTGAACCAAATTTTGATGATGATGACTCTGAAGAA
GAAGCAGAAAGAAGGTTCTACAAGATAGTTACTACATCAGAAAACTACCCAGTTTTGCTA
TCGAAGCTTCAAGAAGAAGGATTGAAGTTTGAAACTGATAATGGCTACGAACTTGTTCCT
CTGAACCCAATTGAGGTGGACGACGAGGCCGTGGAACTAAACAAGGAACTTGTTTCAAAT
TTGCTAGAGCTTGATGACGTTGATGCCGTCTATACAGACCAAAAATGA

Peptide Sequence

PEP ID

Zm00001d038805_P024
PEP Infomation

pep chromosome:B73_RefGen_v4:6:164801311:164807805:-1 gene:Zm00001d038805 transcript:Zm00001d038805_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable transcriptional regulatory protein

Sequence

MVVEVLTDKITRSVADIRNVVKDCGAKLADPGSVTFRFRQARVVNIKVTDADKDQLLTVA
LDAGADDVLEPNFDDDDSEEEAERRFYKIVTTSENYPVLLSKLQEEGLKFETDNGYELVP
LNPIEVDDEAVELNKELVSNLLELDDVDAVYTDQK

Transcript Sequence

Transcript ID

Zm00001d038805_T024
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:164801311:164807805:-1 gene:Zm00001d038805 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable transcriptional regulatory protein

Sequence

GCACACCCAGGCTCCTCACCTCACCACCGCGGCCGCCTGCCCAAAGCAGCCCACCACTCG
GGCGCAGCAATTCGTCGAGCATCCGCCGCGCTCGACGGCCACCGGCCCACCAGGGCACCA
TGGCGTCCGCCACGCGTGCTCTGGGGGCGCTCCTCCACAGGGCCTCGTCTCTGTCTTCCT
CCGCTCCCGCTCTCCGGGGAGCCTCGCTCCTCCGCGGGGACGGGCCTATTGGAAGCGCCG
GACTGTTCCGGAGGCATGCGGCGAGGCGGCGGATTTCGTCGTTCCAGCCGCTCTGCATGG
GAAGACGCTCCTGCAAAATCGCTGGAAGGAAGGTGATGTTCTCTTGCCATGATGCACAAT
GTCACATTAACGAAGTTCGGGACGGCTGGCTGTGCATATTCTGGTTGGCAAAGCCGTGGA
AATATCCCGTGCAATCAATCATGTTGTGCATGCGTGCAATCAAGCAATCAAATTCCCAAT
GAAAATCCAATAGTAACTGCTAGTTTACATTTAACTCCTTCCGCGTGAAACCAGCAACAT
TGTACTTATTTTTATATTTAATCCCATTTCATATGAAACCGTTAGATCTAGATTGGATTC
CTGGATGATTTGATTGCATGCTTGCACCAAATGTGTGATTACAGTGGATATATCCCCGGC
AAAGCCTCCATTTGGAATAATAGAAATGGATGCAACAACAAATATCATTGTGTTTCGAAT
TTTCGGTTCTCTTGAGGATCTGAGCTAGCTTTTGCTGCTAAGTAGTTGTTCGCTTCGGAT
TAAAGCCGACTGTTTAGACTGCTGCAGCTGTAATCTATAGAGACAAAAACATTGTAGAAA
CAGTAGAAGCCGGTACGGATTAAAACCAAGCGAATAAGCTCGGTCCATTAGCGTAATTGA
GAATGGAAAAACTGAAAACAGAAAGTAGCTTTAGTTTCTTGTTTATAAAATGTAGTTAGC
TTTAACGTCTCAATATGTATCCTCAGAGCAACTCCAACAGCCTTACTAAATTGAACAAAA
TCAGTAAAAAAAAGAAAAGCCTGGTTAAAAACGCATCCAACAGGCTAGCTTTCTACCTCT
CTTCTCCATCCGGCTCGTCATCTACTCCCCTCGCTAGGCATCTTTGCCGAGGGCGTACGG
CTCGCCATTTCCTTTTATCGCGCCCAACTGCCCTCCCGCCGTCACGGCAAATTCCAGCTC
CCGCGACCGCGACATTGCACCCTCGCCACCGCGACCAGCCCGTGCCTCCACATTCATCCG
TCGCCATGTACAAACCTGTACGGCCCCATTCGTTGAACAAGTGAAGAAACTGGATTGTGG
AATGCTCCTCTTTCTCAGTGTTCGCCAGGAAGGATAGATCCGGAGGCGCATCGTACGGGT
GGAGATTTGGACCAATCCACTGTAGGATTGATGCACCGGCGTTTGCTTCCTCCTACAAGC
TTCGAAGGCCTAATGTCAGCAAATCTGTCCCATGCCAATCGAATAAACAGGGATGAATCC
TACACAGGTGAGATGCTGGTGGCAATTGCTCATATTTTTTTGGTACTTTTTCAAGACTAG
ACAGTTTTTTGAACCAAAGCAGATTTTGGAACCGGAAGGCATATGTGGACCAGAACACTT
ATGTGCAGATTGAAGTGGATTTTTGCCAGACAAATCTCTCTGCTTGCATGATTGAAGTGC
ATATGTGGCCCAATACACTTATATGCTCTTATTCCTCACTGCCATCTCATTTCTAAAGTT
GGAAAGATTGAACTGAACCTTGCTCTGAACTTTTTTCCTTCTTTGTTTTCTTATTGTTGC
AGGGAGGCAATCCTTTGGATTTCAAAATGTAGTTGATCTAATTCATGCATATGCTGCCAA
AGCTGTTACTGAACAACTAGACCAAAATGAGAACCTTGTATCAGTCAATGCAGATGTCTG
CAATTTCTGGGAAAAGGATGTTATGCCGATGCTTTTCTGTAGGAGTTGCAGATTTTTTTT
TAAAAAAAAAACTTCAGCCGAAACAGGATGTTATATCGAAACATTGAATTAGCAGTGGAT
CGTGTTCAGAAAGTTGGGTTCATTGTAGGGATCAGCTTCCAGGGGTTGGTTCGTTGCAGG
ATCAATTGCCAACCTACCACTGAGTCTAAATTTAGAGTCTGTTGGTTACCCACCCTTCAG
GAAGTTCTATATTTTATAAAGCCATCTCCAAAACTCTAAAATTAGCTAGGAATTATAGCT
ATGCTGTTGGAGTTGCTCTCAGTTCCTTACACCAGTTGTTTCTTTAATTCAGGATGCCCA
GAACTTGAAGAAGATGAAGCGCAACAGCAAAATTGGAAAAGAAATTGTTGCGGCGTAGGT
GTTGCTGGACACTGTGAACTTGCACTATCATTTTAACAGCTTGGTATTTCATTGATTTCA
TAATTTGGATTATTTTGAGCATATGGTTAATCCAACATGCTGTCATCTGCTAGTATATGT
TGACATAAGATGTTTTACCTTTTTGGCCGTTTAAACTTAAATCATTGGACATCTGTTCCC
GTGCTACAGTGTCTATATATTCTCAGTCTGTAGCGTTTCATGTTATTATGTTGTGAAGGT
ATTGCGGTTGTATTTAGTAATTAGACATTGCCTGCTTAATATCTCTGAAGTGAATGGCAC
TATCTTACCCAAGTGGTAGGCCTTGTTAAAATGAAAAAAAAGCAACTGACAACAAGACCA
AGCATCAGACTATCAGAGTTCTAGTGCCATTCATTTAAATTAATTAATCTGGTCCGTTTC
TGGATATCACACAGCATCAAGAAGGGTGGCCCAAACCCTTCATCCAACACAACTTTATCA
GCTATACTAGAGAAAGCAAGGGAACTTGATGTCCCTAGAGAAATTTTGGAGCGCAACATC
AAAAGGGCATCAGAAAAGGGACAAGATACTTACACAGAAAAGGTTTATGAGGTAAACTTT
AGTAGATTCTCATTTTACGATATATGATAAATCATCTCAAAGGCAAAGATACTAATGTTT
GCATTCAGAATAAATGGTTGGTTCAGATATGAGTAGGCTTGTATGCTACTCCCTCTGTAC
AAACTGACCAAGTTTGTAGAAAATTTACTAGTGTTTACAACATCAAATTACTTTCATTAA
ATTCTCCGTGAAATATATTCATAGTGCATTTCTTGAACTTATAGATTTTAATAGTTTTTT
TTTTCTAAAAAACTTTGTTAAAGTTAGAGAAGTTTGACTTTGAAGGGTGGGCCTGGTGCA
GCGGTAGAGCCTACCGTCTGTAACCGGAAGGTCCCGGGTTCGAGCCACATCCTCTGCATA
CTATGCGGGTAAGGCTTGACGCTTAAAGATACCCTTCTCCAGACCCCGCACAGTAGGGAT
GAAAACGGGACGGGAAATTCCCGTACCGTTCCGTTTCGAATACTGTTTTTTCCCGATCGT
TTTCGAATTGTTCAGGAACCGATTAGAAACAGTACGAAAACGATTTAGCTAGTTTTTCGA
TCGTTTTCGTATTTTTCGTTTCCGAGTCGTGCTAATACCGTTTTTCTACCGTTTTATATA
ATATAAGATAGATCTAGCATATAATTTATTTAAGTTATAGACTTTTGTTGTGTTCAAGTG
AATGAATACGCGAAAAGCAAATGTTATAATTACTCTAACTAATATAAATGATGAAAAAGA
TTTGTTTGTGTATTTCTAAATCTTAAAAATTAGGCAATACATTACTTTATTATGTTTTTG
ATAAAACTACAAAATAATTATCTTTCCGACTATAATTTATCGTTTTCGATCGTTTTCGAA
TAACCGACACTTCCGAACCGTATTTCGACCGTTGGTTTTTGTTTTCGTTTTCGTTCCGAC
CAAAAAATATGAAAACAAAAACAATTTAGCTGTTTTTTCGATCGTTTTCGACCGTTTTCA
TCCCTACCGCACAGTGCGGGAAGTCTACGGCACTGGGTACGTCCTTTTTAGAGAAGTTTG
ACTTGGTAGTTAGTACGAAGCTAAAGTGAAATATAATTTGGAACCGGTACGAGTTACTTA
GAGTACATACACTTTTTATGGGGTTTACATAGGTTGTAAGTACATGAAGATTTTTCACAG
GTCTATGGTTTTGGTGGAGTGGGTATGGTCGTTGAAGTTCTAACTGACAAAATTACAAGA
TCAGTTGCTGACATTAGAAACGTGGTGAAAGACTGCGGAGCAAAATTGGCTGATCCTGGA
TCTGTTACCTTTAGATTCAGACAAGCTCGAGTGGTGAACATAAAAGTTACTGATGCAGAT
AAGGACCAACTGCTCACCGTTGCGTTAGATGCTGGTGCTGATGACGTCCTTGAACCAAAT
TTTGATGATGATGACTCTGAAGAAGAAGCAGAAAGAAGGTTCTACAAGATAGTTACTACA
TCAGAAAACTACCCAGTTTTGCTATCGAAGCTTCAAGAAGAAGGATTGAAGTTTGAAACT
GATAATGGCTACGAACTTGTTCCTCTGAACCCAATTGAGGTGGACGACGAGGCCGTGGAA
CTAAACAAGGAACTTGTTTCAAATTTGCTAGAGCTTGATGACGTTGATGCCGTCTATACA
GACCAAAAATGAGTGAATTCATGAGCTACAGCTCTCAATTCAAGACGCGCTCGGCCAATG
GACTTTGTTCGAGTATATTCACTTTTCATTGATGGGAAAAAAATGTTAGGTCTTTTTATG
AAGCCTGGTTGAGCACCATCGGCTCTACCCAAAAACTTAACCTAGTTATCCAGCATCTTT
TT