Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038752_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:6:163885220:163891035:-1 gene:Zm00001d038752 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STICHEL-like 3
Sequence	ATGCCGGCGCCAGCGAGCGGCGGCGGTGGCGGGGACCACCTCCGCGGCCACGCGCACCTG ACCAACTGCATCCACCTGCGCCACCACCACGCCCACGCCCACGCCCACGGCGCGTCCGGG CGGAGGCGCAGCCCCACGGGGTCCTCGGCGTCGGCGTCGGCCGCGCTGATGCGGGACCTC CTGGCCCTGCAGCGCTCGCGCTCGCTGCGGGACCCATCCACCCGCCGCTCCGTCGACGAC TCCGCTTCCAACAACCGGGTCGCCGCCGACCCGGACGACGCCGACCACTCCCGCGCCGGC GCGATCAAGACGCTCCTCGACCAGCTCACGGAGAACCCGCACCCCAAGCCCGGCCGCCGG CCCCGGCGCCGGTTCAGGCGAAGCGCTACCCGTCGCGTCGCCCAGCCCGCTGCCGCCCCC CGCGTCTCCGTCAACTCCAGCTCCCAGGAGGCCGTCTGCGGCAACAGGTACCTCTTCGGC GGCACCGGCGGAGCCGACGGCGGTGTCGAGCTGATGCAGCAGCAGCAGCAGGTGTCGCAC GAGTCGCACAACGTGTGCGGCATCCCGTGGAACTGGTCGCGCATCCACCACCGCGGCAAG TCCATCCTCGACATGGCCGGCCGGAGCCTCTCGTGCGGCCTGTCCGACCCCAAGTCGACG TCGGCGGCGCGGAGGTCCGAACCCGCCACCTCCGCCGCCTCGTGCGGCCACGTCAACGGG TCACGCTCGCACCCGCATTTCCCGGTCACCGCGAGGCTGACGTCCTCGAGCAGTTCAGAC TCCGACTCTCTGCCTCTGCTTGTCGACGGCGTGCGCAACGCCGTCGGTGGCATTTCCAGC AGCTTCTCCGGGGAGCTCGGGATTTTCTCCAAGAGCAGCGAGCTGGACTCCGACCTCGCG TCCGAGGCACGGTCTGGGCAGAAGTCGCGGGGCTCGCACCGTGCCCGACACCGGAGCTTT ACGCAGAAGTATGCTCCAAGGACTTTCAAAGACGTCGTCGGCCAGAGCTTGGTGGTGCAG GCGCTGTCCAATGCCATTCTGAAGAAGAAGATCGGACTGGTGTATGTCTTCTATGGGCCA CATGGCACGGGCAAGACCTCGTGCGCCAGGGTGTTCGCAAAGGCTTTGAATTGCCATTCC CCGGAGCACCCGAGGCCCTGTGATTCATGTGCCTCTTGTATTGCACACAATCTGGGCAAG AGCAGGAGCTTGCTGGAGATTGGACCGGTTGGTAATATAGATCTGGATGGCATTGTGGAT ATCCTTGACAATGTGATGCTCTCGCCGGTGAAATCCCAGCACAGGGTGTTTATAATTGAT GACTGCAACACATTGCCGCCTGATACATGGAGTGTCATATCCAAGGTCGTCGAACGTGCA CCTAGGCGTGTGGTTTTTATTCTCATCAGCCCTAATCTTGATCTCCCTCATATAATCGTG TCGAGGTGCCAAAAGTTCTTTTTCCCCAAACTGAAGGAGTGCGACATTATCAGCACTTTG CAGTGGATTTCTACCAGCGAAGGCCTGGATGTTGATAGAGATGCCTTGAAACTTATTGCT TCCCGGTCAGACGGGTCACTGAGGGATGCCGAGATGACTCTGGATCAACTCAGTCTGCTT GGGCAGACAATTTCGATGTCCCTTGTTCAAGAACTTGTTGGCTTGGTTTCTGATGATAAA TTGGTTGATTTGCTTGATTTAGCACTATCTGCTGATACAGTGAACACAGTGAAAACCTTG CGAGATATCACAGAAACAGGTGTTGAGCCACTGGCCCTGATGTCTCAACTTGCTACAATA ATCACTGACATCCTTGCTGGCACCTATACATTAACACGAGAAAGAGTTCGGAGGAAATTC TTCAAACGTCCAACCTTATCAAAGGATGATATGGAAAAGCTGCGCCAAGCCTTGAAAACA CTCTCTGAAGCTGAAAAACAGTTGAGGGTCTCTAATGACAAGATGACATGGCTTACAGCT GCTCTTCTTCAGCTTGCACCTGATAAACAATACGTATTACCGAGTTCATCCCCGAGCACA AGTCTTATTCAAGGTCTGTTTACCTGCCCCGAGGGAGACATAGCAAGGAACTCTGTTATG GATCATAGTGATATATATGCTGGTGCCCGTAGCTTGGCAAGAGCATCTGACCTTGGAAAT CAATACCATAGAGATGCTAATCCAGTGTCTGGTTCCAGCAACAACATGGCAAACAATTAC CATGTTGGAAGGAGACCTGGGGAACATACCCCAGACAGCCATGTGTTGCCAACCGGTGCT ACAAGAGTGAATGAAGGATCTAGGTATGGCAAAACTGACAGTGAAATGATTTGGCAGGCT GTGCTAGAGAATGTTCAGTCAGACTCATTAAGAAGATTGTTAGCCAGAGAGGGTCGACTG ATATCCGTCAGCCTAGGCACAGCTCCAACTGTACAATTAATATTCAACTCTCGAGTAAAT AAATCTAAAGCTGAGAAGTATAGGGGCCAAATTCTGCAGGCATTTGAATCTGTTCTTTCT TCTACCATAATACTTGAAATTCGATATGAATCTAAGGATGATCTGGCAGCAGGCCATGCT CCAGTTATTTCTGCCTACCCTGAGGATGGCTCCTCAAATCTGGTATTAAGGAGGTCTTTT ACTAAACATAGTTCAGTTTCTTCGGGGGGCGAGAACTTAATTAGGAGGCTTCAGAAAGAT AGTGTGGTCCAACTTGGTAGCTCAAATCAGACACGCTGGATGCAATCTGATCCACATATA TTGACTGAAGGTGAAATTATTGAAGTTGGATCTCAAATGGATTGGCGTGCTGAACAAGAT AGTGGCATTGTTATGGCAAACAGAAGACAAGAGGCTGTCTCGGGAGAAGGTTTGTCATCA CAGAATCAAGAAATTTCTCAGGGAGGAAAAATTGTGAATAATGGAGATGGTCGGCAAAAG AACATTGTGAGAGGCAAGGTATCTCTTGCTAATGTTATTAACCAGGCGGAATCTTGTTCC CAACAAGGTGGCTGGTCTAGACACAAAGCTGTATCAATTGCAGAAAAGCTAGAGCAAGAT AATTTGTAA

Peptide Sequence

PEP ID	Zm00001d038752_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:6:163885220:163891035:-1 gene:Zm00001d038752 transcript:Zm00001d038752_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STICHEL-like 3
Sequence	MPAPASGGGGGDHLRGHAHLTNCIHLRHHHAHAHAHGASGRRRSPTGSSASASAALMRDL LALQRSRSLRDPSTRRSVDDSASNNRVAADPDDADHSRAGAIKTLLDQLTENPHPKPGRR PRRRFRRSATRRVAQPAAAPRVSVNSSSQEAVCGNRYLFGGTGGADGGVELMQQQQQVSH ESHNVCGIPWNWSRIHHRGKSILDMAGRSLSCGLSDPKSTSAARRSEPATSAASCGHVNG SRSHPHFPVTARLTSSSSSDSDSLPLLVDGVRNAVGGISSSFSGELGIFSKSSELDSDLA SEARSGQKSRGSHRARHRSFTQKYAPRTFKDVVGQSLVVQALSNAILKKKIGLVYVFYGP HGTGKTSCARVFAKALNCHSPEHPRPCDSCASCIAHNLGKSRSLLEIGPVGNIDLDGIVD ILDNVMLSPVKSQHRVFIIDDCNTLPPDTWSVISKVVERAPRRVVFILISPNLDLPHIIV SRCQKFFFPKLKECDIISTLQWISTSEGLDVDRDALKLIASRSDGSLRDAEMTLDQLSLL GQTISMSLVQELVGLVSDDKLVDLLDLALSADTVNTVKTLRDITETGVEPLALMSQLATI ITDILAGTYTLTRERVRRKFFKRPTLSKDDMEKLRQALKTLSEAEKQLRVSNDKMTWLTA ALLQLAPDKQYVLPSSSPSTSLIQGLFTCPEGDIARNSVMDHSDIYAGARSLARASDLGN QYHRDANPVSGSSNNMANNYHVGRRPGEHTPDSHVLPTGATRVNEGSRYGKTDSEMIWQA VLENVQSDSLRRLLAREGRLISVSLGTAPTVQLIFNSRVNKSKAEKYRGQILQAFESVLS STIILEIRYESKDDLAAGHAPVISAYPEDGSSNLVLRRSFTKHSSVSSGGENLIRRLQKD SVVQLGSSNQTRWMQSDPHILTEGEIIEVGSQMDWRAEQDSGIVMANRRQEAVSGEGLSS QNQEISQGGKIVNNGDGRQKNIVRGKVSLANVINQAESCSQQGGWSRHKAVSIAEKLEQD NL

Transcript Sequence

Transcript ID	Zm00001d038752_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:163885220:163891035:-1 gene:Zm00001d038752 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STICHEL-like 3
Sequence	CTCCACTCCCCCCGCCCCCATCTCGGCCTCCTCTCCACCCCCCTTGGCCTGTCGCGAAAC GATTGCCCGACACGGGTCCCCAACCAAGATGGCCTAGCCGGAGAGGTTGAACCAGCGCAA TGCCGGCGCCAGCGAGCGGCGGCGGTGGCGGGGACCACCTCCGCGGCCACGCGCACCTGA CCAACTGCATCCACCTGCGCCACCACCACGCCCACGCCCACGCCCACGGCGCGTCCGGGC GGAGGCGCAGCCCCACGGGGTCCTCGGCGTCGGCGTCGGCCGCGCTGATGCGGGACCTCC TGGCCCTGCAGCGCTCGCGCTCGCTGCGGGACCCATCCACCCGCCGCTCCGTCGACGACT CCGCTTCCAACAACCGGGTCGCCGCCGACCCGGACGACGCCGACCACTCCCGCGCCGGCG CGATCAAGACGCTCCTCGACCAGCTCACGGAGAACCCGCACCCCAAGCCCGGCCGCCGGC CCCGGCGCCGGTTCAGGCGAAGCGCTACCCGTCGCGTCGCCCAGCCCGCTGCCGCCCCCC GCGTCTCCGTCAACTCCAGCTCCCAGGAGGCCGTCTGCGGCAACAGGTACCTCTTCGGCG GCACCGGCGGAGCCGACGGCGGTGTCGAGCTGATGCAGCAGCAGCAGCAGGTGTCGCACG AGTCGCACAACGTGTGCGGCATCCCGTGGAACTGGTCGCGCATCCACCACCGCGGCAAGT CCATCCTCGACATGGCCGGCCGGAGCCTCTCGTGCGGCCTGTCCGACCCCAAGTCGACGT CGGCGGCGCGGAGGTCCGAACCCGCCACCTCCGCCGCCTCGTGCGGCCACGTCAACGGGT CACGCTCGCACCCGCATTTCCCGGTCACCGCGAGGCTGACGTCCTCGAGCAGTTCAGACT CCGACTCTCTGCCTCTGCTTGTCGACGGCGTGCGCAACGCCGTCGGTGGCATTTCCAGCA GCTTCTCCGGGGAGCTCGGGATTTTCTCCAAGAGCAGCGAGCTGGACTCCGACCTCGCGT CCGAGGCACGGTCTGGGCAGAAGTCGCGGGGCTCGCACCGTGCCCGACACCGGAGCTTTA CGCAGAAGTATGCTCCAAGGACTTTCAAAGACGTCGTCGGCCAGAGCTTGGTGGTGCAGG CGCTGTCCAATGCCATTCTGAAGAAGAAGATCGGACTGGTGTATGTCTTCTATGGGCCAC ATGGCACGGGCAAGACCTCGTGCGCCAGGGTGTTCGCAAAGGCTTTGAATTGCCATTCCC CGGAGCACCCGAGGCCCTGTGATTCATGTGCCTCTTGTATTGCACACAATCTGGGCAAGA GCAGGAGCTTGCTGGAGATTGGACCGGTTGGTAATATAGATCTGGATGGCATTGTGGATA TCCTTGACAATGTGATGCTCTCGCCGGTGAAATCCCAGCACAGGGTGTTTATAATTGATG ACTGCAACACATTGCCGCCTGATACATGGAGTGTCATATCCAAGGTCGTCGAACGTGCAC CTAGGCGTGTGGTTTTTATTCTCATCAGCCCTAATCTTGATCTCCCTCATATAATCGTGT CGAGGTGCCAAAAGTTCTTTTTCCCCAAACTGAAGGAGTGCGACATTATCAGCACTTTGC AGTGGATTTCTACCAGCGAAGGCCTGGATGTTGATAGAGATGCCTTGAAACTTATTGCTT CCCGGTCAGACGGGTCACTGAGGGATGCCGAGATGACTCTGGATCAACTCAGTCTGCTTG GGCAGACAATTTCGATGTCCCTTGTTCAAGAACTTGTTGGCTTGGTTTCTGATGATAAAT TGGTTGATTTGCTTGATTTAGCACTATCTGCTGATACAGTGAACACAGTGAAAACCTTGC GAGATATCACAGAAACAGGTGTTGAGCCACTGGCCCTGATGTCTCAACTTGCTACAATAA TCACTGACATCCTTGCTGGCACCTATACATTAACACGAGAAAGAGTTCGGAGGAAATTCT TCAAACGTCCAACCTTATCAAAGGATGATATGGAAAAGCTGCGCCAAGCCTTGAAAACAC TCTCTGAAGCTGAAAAACAGTTGAGGGTCTCTAATGACAAGATGACATGGCTTACAGCTG CTCTTCTTCAGCTTGCACCTGATAAACAATACGTATTACCGAGTTCATCCCCGAGCACAA GTCTTATTCAAGGTCTGTTTACCTGCCCCGAGGGAGACATAGCAAGGAACTCTGTTATGG ATCATAGTGATATATATGCTGGTGCCCGTAGCTTGGCAAGAGCATCTGACCTTGGAAATC AATACCATAGAGATGCTAATCCAGTGTCTGGTTCCAGCAACAACATGGCAAACAATTACC ATGTTGGAAGGAGACCTGGGGAACATACCCCAGACAGCCATGTGTTGCCAACCGGTGCTA CAAGAGTGAATGAAGGATCTAGGTATGGCAAAACTGACAGTGAAATGATTTGGCAGGCTG TGCTAGAGAATGTTCAGTCAGACTCATTAAGAAGATTGTTAGCCAGAGAGGGTCGACTGA TATCCGTCAGCCTAGGCACAGCTCCAACTGTACAATTAATATTCAACTCTCGAGTAAATA AATCTAAAGCTGAGAAGTATAGGGGCCAAATTCTGCAGGCATTTGAATCTGTTCTTTCTT CTACCATAATACTTGAAATTCGATATGAATCTAAGGATGATCTGGCAGCAGGCCATGCTC CAGTTATTTCTGCCTACCCTGAGGATGGCTCCTCAAATCTGGTATTAAGGAGGTCTTTTA CTAAACATAGTTCAGTTTCTTCGGGGGGCGAGAACTTAATTAGGAGGCTTCAGAAAGATA GTGTGGTCCAACTTGGTAGCTCAAATCAGACACGCTGGATGCAATCTGATCCACATATAT TGACTGAAGGTGAAATTATTGAAGTTGGATCTCAAATGGATTGGCGTGCTGAACAAGATA GTGGCATTGTTATGGCAAACAGAAGACAAGAGGCTGTCTCGGGAGAAGGTTTGTCATCAC AGAATCAAGAAATTTCTCAGGGAGGAAAAATTGTGAATAATGGAGATGGTCGGCAAAAGA ACATTGTGAGAGGCAAGGTATCTCTTGCTAATGTTATTAACCAGGCGGAATCTTGTTCCC AACAAGGTGGCTGGTCTAGACACAAAGCTGTATCAATTGCAGAAAAGCTAGAGCAAGATA ATTTGTAAGTTTTCATGTTTTTTTCAACTCTCTTATGCTATTTCTAGCCATTGTATGTGC AAACATATCCATTGCATGTGGAATACTATCAAGTACTACTATTCTGCACCCAAATTATGT AGGTGAAGCATCGTAGTTTTCAATCATCAGAAGATGACTTCTGACGACTTTTTTGAATGT TGATCTGTTTGCAGGAGATTGGAGCCTAGATCCAGTTTGCTTTGTTGGAAAGCTTCAAGC ACCTCTAGACGGAAGGTAATGATTTTGTAGCCAACCTCAGGCCAAATACCTTCTCATTCT TTTACTCTCCTTAAAGGACCAGTAACTTTGTGTCATTTATCGTTTCTTAATCATGTGACA TGATAATAAAATGAAGGTTACTGTGAATATAGTATATGGCAAAAAAAGCGTGGTAGTTTG ATACTTGTTGGCTGGTCTCTTCTGCACTAACTATTCTTGAATAGTATTATTGTATCCATT GTTCATGTATATTGTCTATTAACAATGTTCTGATACATATGAAAAAACTGAACCAAATAG TCAAGATTATGTTTTCATGAAACTGCAGTAACTGTAAGTAGGTGTGTATTTTTTAGTTAG ACTGCAAACGTTGTATGTTATGGATTATTTGTAAACATTGTCAACATGTTTTTCTCGTGG AGTGCAGTTTTTATTTTTTAGCGCCCAGGGATGCTGGCATCATCGTTAGCTAAAATACCA TATTGCAGTGTTTCAAAAATATCATAAAGATAGTCTATGCAGTACACATAAAATTAAATA TAGCTGCAACAATTCAGTTTAAATTCATCGTAGATGTCCAGAAACAAAATAGACAAGCAG CCAACCTGGCACTGTTCATCATGTGCTGACAGCGATACTTCTGCTTTTTTAATATCAACA TCGGAGATGAATTTCAAACTGAATTATTGCTGTTGCACTTAGGTGTGTTGCATACATATT TTTTTGTGATGATTTTTTAGAACATTACAACATGATGTTTTAGGGTCTGTTTGGTTCACA ACTATAGATTTATGAAAATATGAATCCAACTGTGAGCTGTGAAAAATCTGCTTCGAGCTG AGGGTTGTGAGAAAGTTAAAATATATTTGATTAAAACAACTATCAATGGTAGATTCTACA AGAGTATGATAGCTGTAACATGAATAATGTAATCTGGAAAATTTGGGGTAGATAGTGATT TTGAATTGAACTAGAGAAATCTATAGATTTTTAAAAATCTATTCTGGTGTTGTACCGTTT GGGTGAGATTTTAGATTTTTGGCAGCGAATTGGTTCAGAAAACTGAACCAAACACACCTG GTTAAAGAGGGTGTCGGCCTACTTGCGCACCATATAATTTTCTGTTCTTGTGTTTCTGCT GACATTTTCCACTCTTGTTGACCGGCACAATCATTTCCTCTGCAGCTGTCTGCACTGAAG ATCAGGACACGAAGATCACGAGCTTTATCAAGGCTCGCCTTGTGCGGAAGGTGTATTTCA GTGAGATCTCCAAGATGAAGCATTAGGGGGTCAATCGCCCCAGATTTTACATGTAGCTAA CTTAGCAGGGCACCCATAATCCATAATTTATTCTCTGTAGTTGTAGCAGCGACCTAGAGG TGTCATTCTGTAGCACATTGTGTAACATGTAGGAGAGAGATAAACACATATCCCCATTCT TTCTATTGAAACACCAGAAATAGTTGCTCTTGCTC