Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d038745_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:6:163761081:163764577:1 gene:Zm00001d038745 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1-related protein kinase catalytic subunit alpha KIN10
Sequence	ATGGAGGGAGCGGGAAGAGATGCCAACCCTTTGAGCGGTTACAGAATTGGCAAAACCCTG GGAATTGGGTCGTTCGGTAAAGTGAAGATCGCGGAACATATATTGACTGGTCATAAGGTG GCGATCAAGATTCTCAATCGCAAGAAGATCAGAAGCATGGATATGGAAGAGAAAGTTAAG AGAGAAATCAAGATACTGAGATTATTTATGCATCCTCATATCATACGCCTTTATGAGGTG ATAGATACACCTGCTGATATCTGTGTTGTTATGGAGTATGTTAAATCTGGAGAGTTGTTT GATTACATCGTTGAGAAGGGAAGGCTACACGAAGAGGAAGCCCGACACTTTTTTCAGCAG ATCATATCTGGTGTTGAATATTGCCATAGGAACATGGTTGCTCACCGTGATTTAAAGCCA GAGAATCTTCTTTTGGATTCAAAATGCAATGTTAAGATTGCCGATTTTGGCTTAAGTAAT ATTATGCGTGATGGTCACTTTCTTAAGACGAGTTGTGGTAGCCCGAATTATGCAGCACCT GAGGTCATATCTGGTAAACTATATGCTGGTCCTGAAGTTGACGTCTGGAGCTGTGGAGTT ATTCTTTATGCTCTTCTTTGTGGCACTCTCCCATTTGACGATGAGAATATTCCAAACCTT TTCAAGAAAATAAAGGGTGGAATATATACCCTTCCTAGTCATTTGTCACCTTCAGCGAGG GACTTGATTCCCAGAATGCTGGTTGTTGATCCAATGAAAAGGATTACAATACGTGAAATC CGTGAACATGTGTGGTTCAAGATCCGACTTCCGCGCTATTTGGCTGTGCCGCCTCCAGAC ACTGCTCAACAAGTTAAAAAGGTCGACGAGGAAACTCTTAATGATGTTATTAAGATGGGT TTTGACAAGAATCAGCTAATTGAATCTCTGCAAAACAGATTGCAGAATGAGGCAACAGTT GCCTATTATTTACTCTTGGACAATAGGCTTCGTACAACCAGTGGTTATCTTGGATCTGAG TTTCAAGAATCTATGGACTCATCTTTGTCTCAAGTAATCGCTGAAACACCAACTTCAGCA ACTGAACTTCGTCAGCATGGGTTTTCAGAATCTCCAGGTTCTGGCTTGAGGCAGCATTTT GCAGCTGAAAGGAAATGGGCCCTTGGTCTTCAGTCTCGAGCACATCCACGAGAAATAATA AGTGAAGTGCTTAAAGCTCTGCAAGAACTGAATGTTTACTGGAAAAAGATTGGACACTAC AACATGAAATGCAGATGGAGTCCTGGCTGCCTTGAGAGTATGATGCATAACAGTGATAGC TTCAGTGCGGAGTCTGCTATAATTGAAACTGATGTTTTCATGGAGAAATCAACCCCGACA GTGAAGTTTGAGATTCAGCTTTACAAAACGAGGGATGAGAAGTACCTTCTTGACCTGCAA AGGGTCAGTGGATCACATCTTCTCTTTCTGGACTTGTGTTCCGCCTTTCTAACTCAGCTG AGAGTTCTTTGA

Peptide Sequence

PEP ID	Zm00001d038745_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:6:163761081:163764577:1 gene:Zm00001d038745 transcript:Zm00001d038745_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1-related protein kinase catalytic subunit alpha KIN10
Sequence	MEGAGRDANPLSGYRIGKTLGIGSFGKVKIAEHILTGHKVAIKILNRKKIRSMDMEEKVK REIKILRLFMHPHIIRLYEVIDTPADICVVMEYVKSGELFDYIVEKGRLHEEEARHFFQQ IISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAP EVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPSAR DLIPRMLVVDPMKRITIREIREHVWFKIRLPRYLAVPPPDTAQQVKKVDEETLNDVIKMG FDKNQLIESLQNRLQNEATVAYYLLLDNRLRTTSGYLGSEFQESMDSSLSQVIAETPTSA TELRQHGFSESPGSGLRQHFAAERKWALGLQSRAHPREIISEVLKALQELNVYWKKIGHY NMKCRWSPGCLESMMHNSDSFSAESAIIETDVFMEKSTPTVKFEIQLYKTRDEKYLLDLQ RVSGSHLLFLDLCSAFLTQLRVL

Transcript Sequence

Transcript ID	Zm00001d038745_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:163761081:163764577:1 gene:Zm00001d038745 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF1-related protein kinase catalytic subunit alpha KIN10
Sequence	ATATTCGATGACTGTGATTCAGGTACACGATGGAGGGAGCGGGAAGAGATGCCAACCCTT TGAGCGGTTACAGAATTGGCAAAACCCTGGGAATTGGGTCGTTCGGTAAAGTGAAGATCG CGGAACATATATTGACTGGTCATAAGGTGGCGATCAAGATTCTCAATCGCAAGAAGATCA GAAGCATGGATATGGAAGAGAAAGTTAAGAGAGAAATCAAGATACTGAGATTATTTATGC ATCCTCATATCATACGCCTTTATGAGGTGATAGATACACCTGCTGATATCTGTGTTGTTA TGGAGTATGTTAAATCTGGAGAGTTGTTTGATTACATCGTTGAGAAGGGAAGGCTACACG AAGAGGAAGCCCGACACTTTTTTCAGCAGATCATATCTGGTGTTGAATATTGCCATAGGA ACATGGTTGCTCACCGTGATTTAAAGCCAGAGAATCTTCTTTTGGATTCAAAATGCAATG TTAAGATTGCCGATTTTGGCTTAAGTAATATTATGCGTGATGGTCACTTTCTTAAGACGA GTTGTGGTAGCCCGAATTATGCAGCACCTGAGGTCATATCTGGTAAACTATATGCTGGTC CTGAAGTTGACGTCTGGAGCTGTGGAGTTATTCTTTATGCTCTTCTTTGTGGCACTCTCC CATTTGACGATGAGAATATTCCAAACCTTTTCAAGAAAATAAAGGGTGGAATATATACCC TTCCTAGTCATTTGTCACCTTCAGCGAGGGACTTGATTCCCAGAATGCTGGTTGTTGATC CAATGAAAAGGATTACAATACGTGAAATCCGTGAACATGTGTGGTTCAAGATCCGACTTC CGCGCTATTTGGCTGTGCCGCCTCCAGACACTGCTCAACAAGTTAAAAAGGTCGACGAGG AAACTCTTAATGATGTTATTAAGATGGGTTTTGACAAGAATCAGCTAATTGAATCTCTGC AAAACAGATTGCAGAATGAGGCAACAGTTGCCTATTATTTACTCTTGGACAATAGGCTTC GTACAACCAGTGGTTATCTTGGATCTGAGTTTCAAGAATCTATGGACTCATCTTTGTCTC AAGTAATCGCTGAAACACCAACTTCAGCAACTGAACTTCGTCAGCATGGGTTTTCAGAAT CTCCAGGTTCTGGCTTGAGGCAGCATTTTGCAGCTGAAAGGAAATGGGCCCTTGGTCTTC AGTCTCGAGCACATCCACGAGAAATAATAAGTGAAGTGCTTAAAGCTCTGCAAGAACTGA ATGTTTACTGGAAAAAGATTGGACACTACAACATGAAATGCAGATGGAGTCCTGGCTGCC TTGAGAGTATGATGCATAACAGTGATAGCTTCAGTGCGGAGTCTGCTATAATTGAAACTG ATGTTTTCATGGAGAAATCAACCCCGACAGTGAAGTTTGAGATTCAGCTTTACAAAACGA GGGATGAGAAGTACCTTCTTGACCTGCAAAGGGTCAGTGGATCACATCTTCTCTTTCTGG ACTTGTGTTCCGCCTTTCTAACTCAGCTGAGAGTTCTTTGAGCCTGACATGATTGGCTTC CCAAGCACTCCTTGATGCACCCAGTGGAGTTTCAAGTTACATTTGAGATGTACATAATGA CCATATATAATCCTCCAGTAGATTATATTTTCTGGAGCATGTAATGTAGACGTTAGAGGC TTGTCCTGGTTTGCCAAGATGGTTGTTACCTAAGGTCCTAACAAGAGGCCGCAGGCGAGC CCAGTCCAATTAGATGATGTGAAAAATTTTTGGCCTTTTTTTAGTCTTTGGACATGTTAT